Factsheet for TraesCS3B01G592000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G529900.1	Wheat	cytosol	88.39	95.44
TraesCS3A01G524700.1	Wheat	cytosol	85.22	92.02
TraesCS4B01G374300.1	Wheat	cytosol	81.53	88.54
TraesCS4B01G374200.1	Wheat	cytosol	74.67	81.32
TraesCS4B01G374100.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	77.31	72.89
Os01t0351800-01	Rice	cytosol	59.89	65.99
Zm00001d048547_P001	Maize	cytosol, peroxisome, plastid	58.58	62.18
Os01t0352100-01	Rice	cytosol	56.73	61.43
EER95699	Sorghum	cytosol	57.52	61.41
GSMUA_Achr11P...	Banana	plastid	51.72	56.98
VIT_02s0012g00440.t01	Wine grape	extracellular	18.21	52.67
VIT_02s0012g00390.t01	Wine grape	cytosol	48.55	52.12
VIT_02s0012g00320.t01	Wine grape	cytosol	37.47	52.01
VIT_02s0012g00450.t01	Wine grape	cytosol, nucleus, peroxisome	47.23	50.71
VIT_02s0012g00400.t01	Wine grape	cytosol, peroxisome, plastid	46.17	50.58
VIT_02s0012g00360.t01	Wine grape	cytosol	43.27	48.81
TraesCS3B01G440500.1	Wheat	cytosol	46.17	47.43
VIT_02s0012g00350.t01	Wine grape	cytosol	42.74	46.82
Bra010470.1-P	Field mustard	cytosol	32.45	46.07
TraesCS1B01G234500.1	Wheat	plastid	31.66	45.45
TraesCS2B01G077500.1	Wheat	cytoskeleton, cytosol, peroxisome	43.54	45.45
Bra026693.1-P	Field mustard	cytosol	42.74	45.25
KRH13456	Soybean	cytosol	41.42	44.48
AT4G25300.1	Thale cress	cytosol	41.69	44.38
VIT_02s0012g00410.t01	Wine grape	plastid	40.37	44.22
AT4G25310.1	Thale cress	cytosol	41.16	44.19
AT1G17010.1	Thale cress	cytosol	41.95	44.04
KRH58590	Soybean	cytosol	41.69	44.01
AT1G17020.1	Thale cress	cytosol	41.42	43.85
Bra035046.1-P	Field mustard	cytosol	41.42	43.85
TraesCS2B01G077600.1	Wheat	cytosol	42.48	43.75
TraesCS2B01G077800.1	Wheat	cytosol	42.22	43.72
KRH27437	Soybean	cytosol	41.16	43.58
Solyc02g071430.2.1	Tomato	cytosol	41.69	43.41
Bra019177.1-P	Field mustard	cytosol	40.37	43.22
KRH71023	Soybean	cytosol	40.63	43.02
KRH42495	Soybean	cytosol	40.37	42.98
PGSC0003DMT400007989	Potato	cytosol	41.16	42.98
TraesCS4B01G335300.2	Wheat	cytosol	41.16	42.98
Bra026695.1-P	Field mustard	cytosol, nucleus, peroxisome	38.52	42.94
KRH21858	Soybean	cytosol	40.11	42.58
KRH75001	Soybean	cytosol	39.31	42.57
AT1G78550.1	Thale cress	cytosol, nucleus, peroxisome	39.84	42.42
VIT_02s0012g00380.t01	Wine grape	cytosol	29.82	42.32
Solyc02g071380.2.1	Tomato	cytosol, nucleus, peroxisome	39.84	42.06
Bra026008.1-P	Field mustard	cytosol, nucleus, peroxisome	38.26	42.03
Bra010469.1-P	Field mustard	cytosol	38.79	42.0
Solyc02g071360.2.1	Tomato	cytosol	40.11	41.87
KRH27439	Soybean	cytosol	39.58	41.78
KRH75184	Soybean	cytosol	27.44	41.77
PGSC0003DMT400018663	Potato	cytosol	39.58	41.55
Solyc02g071490.2.1	Tomato	cytosol	39.58	41.55
PGSC0003DMT400007963	Potato	cytosol	40.11	41.53
Bra010472.1-P	Field mustard	cytosol	39.05	41.34
PGSC0003DMT400008001	Potato	cytosol	39.05	41.34
Solyc02g071400.2.1	Tomato	cytosol	36.94	41.18
PGSC0003DMT400007992	Potato	cytosol, nucleus, peroxisome	39.31	41.16
KRH43438	Soybean	nucleus	29.29	41.11
KRH71025	Soybean	cytosol	38.52	41.01
PGSC0003DMT400007999	Potato	cytosol	38.26	40.85
Solyc02g071450.2.1	Tomato	cytosol	38.26	40.28
TraesCS3B01G497900.1	Wheat	cytosol	39.31	40.16
KRH71028	Soybean	cytosol	38.26	39.84
Solyc02g071410.2.1	Tomato	cytosol	37.73	39.72
PGSC0003DMT400018670	Potato	cytosol	36.41	39.54
Solyc02g071470.2.1	Tomato	cytosol	37.47	39.44
Solyc08g062370.2.1	Tomato	cytoskeleton, cytosol, peroxisome	18.47	39.33
PGSC0003DMT400018673	Potato	cytosol	29.02	39.29
Solyc02g071500.2.1	Tomato	cytosol	36.68	39.27
PGSC0003DMT400055956	Potato	cytosol	18.21	38.76
Solyc02g071440.2.1	Tomato	cytosol	35.62	38.57
KRH49748	Soybean	cytosol	37.2	38.52
KRG89247	Soybean	cytosol, peroxisome, plastid	23.75	38.14
PGSC0003DMT400007990	Potato	nucleus	21.64	37.96
KRG89246	Soybean	cytosol	36.15	37.95
PGSC0003DMT400059406	Potato	peroxisome	24.27	37.7
Solyc02g071480.2.1	Tomato	cytosol, nucleus, peroxisome	33.77	37.43
KRH49750	Soybean	cytosol	34.56	37.32
TraesCS1B01G345200.1	Wheat	cytosol	35.36	37.22
KRH11118	Soybean	cytosol, nucleus, peroxisome, plastid	35.62	36.29
KRH58593	Soybean	cytosol, peroxisome, plastid	34.56	36.09
KRH21128	Soybean	cytosol	26.12	36.0
TraesCS5B01G466400.1	Wheat	cytosol	33.25	35.59
TraesCS3B01G520100.3	Wheat	cytosol	36.41	35.57
TraesCS5B01G224800.1	Wheat	cytosol, nucleus, peroxisome	28.76	35.05
TraesCS1B01G332300.1	Wheat	cytosol	30.61	33.53
TraesCS7B01G041900.1	Wheat	cytosol	31.13	33.05
TraesCS7B01G042400.2	Wheat	cytosol	30.61	32.68
TraesCS5B01G224900.1	Wheat	cytosol	30.61	32.58
TraesCS6B01G351600.1	Wheat	cytosol	27.97	32.02
TraesCS1B01G332200.1	Wheat	cytosol	29.82	31.92
TraesCS6B01G145400.1	Wheat	cytosol	29.29	31.9
TraesCS7B01G042000.1	Wheat	cytosol	21.9	31.68
Bra013884.1-P	Field mustard	cytosol	36.68	31.66
TraesCS7B01G042500.1	Wheat	cytosol	30.08	31.41
TraesCS6B01G412800.1	Wheat	cytosol	29.29	31.18
TraesCS7B01G042100.2	Wheat	cytosol	29.02	30.99
TraesCS7B01G042300.1	Wheat	cytosol	29.02	30.9
TraesCS6B01G412700.1	Wheat	cytosol	27.7	29.58
TraesCS5B01G282100.1	Wheat	golgi	28.23	29.08
TraesCS7B01G041600.1	Wheat	cytosol	27.7	28.07
TraesCS7B01G042200.3	Wheat	peroxisome	24.54	25.41

Protein Annotations

EnsemblPlants:TraesCS3B01G592000.1	EnsemblPlantsGene:TraesCS3B01G592000	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF360	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SEG:seg	SUPFAM:SSF51197	MapMan:50.1.13	:	:

Description

No Description!

Coordinates

chr3B:-:816276871..816278437

Molecular Weight (calculated)

42753.9 Da

IEP (calculated)

5.448

GRAVY (calculated)

-0.449

Length

379 amino acids

Sequence
(BLAST)

001: MPKEDTCGSQ NTRLQYSGNQ QHLNYQERQE MGSLPVPSVQ ALVAATGGDD VPLRYLRPEA AAEAVTGDAD GEAQIPIIDH QRLLLELDHG GEESARLHRA
101: CQDWGFFQLV NHSVPDDVVE SMKANIQQFF QLSAETKKRF AQEQGQLEGY GQLFVVSEDQ KLDWADMLFL YTQPPEMRNT KFWPDQPAAF RSALDRYSDA
201: VKDVSDSLLA TMAKNLGLKR EAIADKCIRG MQKVRINYYP PCAQPEKVVG LSPHSDANLL TLVLQVNHVQ GLQIKRNGSW LPVKPVPGAF VVNIGDMFEV
301: LTNGRYRSIE HRAVVDPKEE RLSIAAFQFP NIHTMIGPMK ELTAHEDDAY KTLDLESFMR TFFSTKLEGK NFLEQMKLN

Best Arabidopsis Sequence Match ( AT1G17010.1 )
(BLAST)

001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.