Factsheet for TraesCS4B01G374200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G539800.1	Wheat	cytosol	97.13	97.13
TraesCS4D01G363200.1	Wheat	cytosol	96.84	96.84
TraesCS4B01G374300.1	Wheat	cytosol	82.47	82.23
TraesCS3B01G592000.1	Wheat	cytosol	81.32	74.67
Os01t0351800-01	Rice	cytosol	70.11	70.93
TraesCS4B01G374100.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	81.61	70.65
Os01t0352100-01	Rice	cytosol	66.67	66.29
Zm00001d048547_P001	Maize	cytosol, peroxisome, plastid	66.38	64.71
EER95699	Sorghum	cytosol	65.8	64.51
GSMUA_Achr11P...	Banana	plastid	58.05	58.72
VIT_02s0012g00440.t01	Wine grape	extracellular	20.69	54.96
VIT_02s0012g00390.t01	Wine grape	cytosol	52.59	51.84
VIT_02s0012g00450.t01	Wine grape	cytosol, nucleus, peroxisome	51.15	50.42
VIT_02s0012g00400.t01	Wine grape	cytosol, peroxisome, plastid	50.0	50.29
VIT_02s0012g00320.t01	Wine grape	cytosol	38.79	49.45
VIT_02s0012g00360.t01	Wine grape	cytosol	46.55	48.21
Bra010470.1-P	Field mustard	cytosol	35.92	46.82
Bra026693.1-P	Field mustard	cytosol	47.41	46.09
TraesCS3B01G440500.1	Wheat	cytosol	48.85	46.07
TraesCS1B01G234500.1	Wheat	plastid	34.77	45.83
TraesCS2B01G077800.1	Wheat	cytosol	47.7	45.36
KRH13456	Soybean	cytosol	45.98	45.33
TraesCS2B01G077500.1	Wheat	cytoskeleton, cytosol, peroxisome	47.13	45.18
AT4G25300.1	Thale cress	cytosol	45.98	44.94
AT1G17010.1	Thale cress	cytosol	46.55	44.88
VIT_02s0012g00350.t01	Wine grape	cytosol	44.54	44.8
AT4G25310.1	Thale cress	cytosol	45.11	44.48
Bra019177.1-P	Field mustard	cytosol	44.83	44.07
AT1G17020.1	Thale cress	cytosol	45.11	43.85
Bra026695.1-P	Field mustard	cytosol, nucleus, peroxisome	42.82	43.82
Bra035046.1-P	Field mustard	cytosol	44.83	43.58
AT1G78550.1	Thale cress	cytosol, nucleus, peroxisome	44.54	43.54
KRH58590	Soybean	cytosol	44.83	43.45
PGSC0003DMT400007989	Potato	cytosol	45.11	43.25
TraesCS2B01G077600.1	Wheat	cytosol	45.69	43.21
KRH42495	Soybean	cytosol	43.97	42.98
Solyc02g071360.2.1	Tomato	cytosol	44.83	42.98
TraesCS4B01G335300.2	Wheat	cytosol	44.83	42.98
Solyc02g071490.2.1	Tomato	cytosol	44.54	42.94
KRH27439	Soybean	cytosol	44.25	42.9
KRH21858	Soybean	cytosol	43.97	42.86
VIT_02s0012g00410.t01	Wine grape	plastid	42.53	42.77
Solyc02g071430.2.1	Tomato	cytosol	44.54	42.58
KRH27437	Soybean	cytosol	43.68	42.46
KRH71023	Soybean	cytosol	43.68	42.46
PGSC0003DMT400018663	Potato	cytosol	43.97	42.38
Bra010469.1-P	Field mustard	cytosol	42.53	42.29
KRH75001	Soybean	cytosol	42.53	42.29
KRH43438	Soybean	nucleus	32.47	41.85
Solyc02g071500.2.1	Tomato	cytosol	42.53	41.81
Bra010472.1-P	Field mustard	cytosol	42.82	41.62
PGSC0003DMT400008001	Potato	cytosol	42.82	41.62
PGSC0003DMT400007963	Potato	cytosol	43.68	41.53
Solyc02g071380.2.1	Tomato	cytosol, nucleus, peroxisome	42.82	41.5
Bra026008.1-P	Field mustard	cytosol, nucleus, peroxisome	41.09	41.45
Solyc02g071450.2.1	Tomato	cytosol	42.53	41.11
KRH75184	Soybean	cytosol	29.31	40.96
VIT_02s0012g00380.t01	Wine grape	cytosol	31.32	40.82
PGSC0003DMT400007992	Potato	cytosol, nucleus, peroxisome	42.24	40.61
KRH71025	Soybean	cytosol	41.38	40.45
PGSC0003DMT400007999	Potato	cytosol	41.09	40.28
PGSC0003DMT400018673	Potato	cytosol	32.18	40.0
Solyc02g071400.2.1	Tomato	cytosol	39.08	40.0
Solyc02g071470.2.1	Tomato	cytosol	41.38	40.0
KRH71028	Soybean	cytosol	41.67	39.84
Solyc02g071440.2.1	Tomato	cytosol	39.94	39.71
Solyc02g071410.2.1	Tomato	cytosol	40.8	39.44
TraesCS3B01G497900.1	Wheat	cytosol	41.67	39.08
PGSC0003DMT400018670	Potato	cytosol	39.08	38.97
PGSC0003DMT400007990	Potato	nucleus	23.56	37.96
Solyc08g062370.2.1	Tomato	cytoskeleton, cytosol, peroxisome	19.25	37.64
TraesCS1B01G345200.1	Wheat	cytosol	38.79	37.5
PGSC0003DMT400059406	Potato	peroxisome	26.15	37.3
Solyc02g071480.2.1	Tomato	cytosol, nucleus, peroxisome	36.49	37.13
KRH11118	Soybean	cytosol, nucleus, peroxisome, plastid	39.66	37.1
KRH21128	Soybean	cytosol	28.74	36.36
KRH49748	Soybean	cytosol	37.93	36.07
KRG89247	Soybean	cytosol, peroxisome, plastid	24.43	36.02
PGSC0003DMT400055956	Potato	cytosol	18.39	35.96
KRG89246	Soybean	cytosol	36.78	35.46
KRH49750	Soybean	cytosol	35.63	35.33
TraesCS5B01G466400.1	Wheat	cytosol	35.63	35.03
KRH58593	Soybean	cytosol, peroxisome, plastid	36.49	34.99
TraesCS5B01G224800.1	Wheat	cytosol, nucleus, peroxisome	30.46	34.08
TraesCS3B01G520100.3	Wheat	cytosol	37.93	34.02
TraesCS7B01G041900.1	Wheat	cytosol	34.77	33.89
TraesCS1B01G332300.1	Wheat	cytosol	33.33	33.53
TraesCS7B01G042000.1	Wheat	cytosol	25.0	33.21
TraesCS7B01G042500.1	Wheat	cytosol	33.91	32.51
TraesCS1B01G332200.1	Wheat	cytosol	32.76	32.2
TraesCS7B01G042100.2	Wheat	cytosol	32.76	32.11
TraesCS7B01G042400.2	Wheat	cytosol	32.76	32.11
TraesCS5B01G224900.1	Wheat	cytosol	32.18	31.46
TraesCS7B01G042300.1	Wheat	cytosol	32.18	31.46
TraesCS6B01G351600.1	Wheat	cytosol	29.6	31.12
TraesCS6B01G145400.1	Wheat	cytosol	31.03	31.03
Bra013884.1-P	Field mustard	cytosol	38.79	30.75
TraesCS6B01G412800.1	Wheat	cytosol	30.75	30.06
TraesCS6B01G412700.1	Wheat	cytosol	29.31	28.73
TraesCS5B01G282100.1	Wheat	golgi	30.17	28.53
TraesCS7B01G041600.1	Wheat	cytosol	29.89	27.81
TraesCS7B01G042200.3	Wheat	peroxisome	27.59	26.23

Protein Annotations

EnsemblPlants:TraesCS4B01G374200.1	EnsemblPlantsGene:TraesCS4B01G374200	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF360	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SUPFAM:SSF51197	MapMan:50.1.13	:	:	:

Description

No Description!

Coordinates

chr4B:+:658170313..658171827

Molecular Weight (calculated)

39036.5 Da

IEP (calculated)

5.155

GRAVY (calculated)

-0.301

Length

348 amino acids

Sequence
(BLAST)

001: MESLPVPSVQ AMVAATGGAD VPPRYLRPAE AVTGIVDGEG EAQIPIIDYR RLLLELDPRG EESARLHSAC QEWGFFQLVN HSVPADVVEG MKANIQQFFQ
101: LPAETKKRFA QERGQLEGYG QLFVVSEDQK LDWADMLYLY TQPPESRNTK FWPDQPVNFR STLDRYSGAV KEIADSLLAT MAENLGLKQE VIADRCVGGV
201: QSVRMNYYPP CAQAEKVVGF SPHSDADLLT LVLQVNHVQG LQIKRNGSWF PVRPVEGALI VNIGDIFEIF TNGRYRSIEH RAVVDPKEER LSAAAFHSPN
301: IHATIGPLKE LTADEDEAYK TVDHENFMRL FFATKLEGKS FLDRMKLK

Best Arabidopsis Sequence Match ( AT4G25300.1 )
(BLAST)

001: MEVKGATRSS IIVPSVQEMV KEKMITTVPP RYVRSDQDVA EIAVDSGLRN QIPIIDMSLL CSSTSMDSEI DKLDSACKEW GFFQLVNHGM ESSFLNKVKS
101: EVQDFFNLPM EEKKNLWQQP DEIEGFGQVF VVSEEQKLDW ADMFFLTMQP VRLRKPHLFP KLPLPFRDTL DMYSAEVKSI AKILLGKIAV ALKIKPEEMD
201: KLFDDELGQR IRLNYYPRCP EPDKVIGLTP HSDSTGLTIL LQANEVEGLQ IKKNAKWVSV KPLPNALVVN VGDILEIITN GTYRSIEHRG VVNSEKERLS
301: VAAFHNIGLG KEIGPMRSLV ERHKAAFFKS VTTEEYFNGL FSRELDGKAY LDVMRL

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SB33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.