Factsheet for TraesCS6B01G145400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G107100.1	Wheat	cytosol	96.84	96.84
EER87960	Sorghum	cytosol	32.18	63.64
TraesCS7B01G042400.2	Wheat	cytosol	59.2	58.03
TraesCS5B01G224800.1	Wheat	cytosol, nucleus, peroxisome	49.71	55.63
Zm00001d045141_P001	Maize	cytosol	43.68	54.29
TraesCS6B01G351600.1	Wheat	cytosol	51.44	54.08
TraesCS5B01G224900.1	Wheat	cytosol	51.72	50.56
TraesCS7B01G041900.1	Wheat	cytosol	51.72	50.42
TraesCS7B01G042000.1	Wheat	cytosol	36.49	48.47
TraesCS7B01G042300.1	Wheat	cytosol	49.14	48.03
TraesCS1B01G332200.1	Wheat	cytosol	48.85	48.02
TraesCS1B01G332300.1	Wheat	cytosol	47.7	47.98
TraesCS7B01G042100.2	Wheat	cytosol	48.28	47.32
TraesCS7B01G042200.3	Wheat	peroxisome	49.43	46.99
TraesCS6B01G412800.1	Wheat	cytosol	47.41	46.35
PGSC0003DMT400049384	Potato	cytosol	35.34	43.77
TraesCS7B01G042500.1	Wheat	cytosol	45.4	43.53
VIT_11s0118g00400.t01	Wine grape	peroxisome	34.2	43.43
Solyc10g076840.1.1	Tomato	cytosol	42.53	42.65
VIT_11s0118g00370.t01	Wine grape	plastid	39.37	42.55
TraesCS6B01G412700.1	Wheat	cytosol	43.1	42.25
PGSC0003DMT400073345	Potato	cytosol	42.82	41.97
Solyc06g068270.2.1	Tomato	nucleus	42.82	41.97
TraesCS5B01G282100.1	Wheat	golgi	44.25	41.85
VIT_11s0118g00390.t01	Wine grape	cytosol, nucleus, peroxisome	42.24	41.29
Bra002299.1-P	Field mustard	cytosol	18.1	41.18
Solyc10g086780.1.1	Tomato	cytosol	36.49	40.97
PGSC0003DMT400049392	Potato	cytosol	40.8	40.92
CDY28799	Canola	cytoskeleton, cytosol, peroxisome	26.44	40.89
Bra022690.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	26.44	40.89
Solyc07g045040.2.1	Tomato	cytosol	41.09	40.62
VIT_09s0002g08090.t01	Wine grape	cytosol, nucleus, peroxisome	41.09	40.62
KRH60778	Soybean	cytosol, nucleus, peroxisome	41.38	40.45
TraesCS7B01G041600.1	Wheat	cytosol	43.1	40.11
KRH03607	Soybean	cytosol, peroxisome, plastid	39.66	39.32
CDY71604	Canola	cytosol	39.08	38.97
Bra006559.1-P	Field mustard	cytosol	39.08	38.86
CDY51847	Canola	cytosol	38.79	38.79
AT5G20400.1	Thale cress	cytosol	38.22	38.22
AT1G49390.1	Thale cress	cytosol	37.93	37.93
CDY63243	Canola	mitochondrion	16.38	37.75
CDY56860	Canola	cytosol	36.78	36.89
AT5G20550.1	Thale cress	cytosol	36.78	36.68
Bra002298.1-P	Field mustard	cytosol	36.49	36.49
AT5G54000.2	Thale cress	cytosol	36.49	36.39
CDX92465	Canola	cytosol	36.49	36.39
VIT_11s0118g00360.t01	Wine grape	cytosol	41.38	36.18
KRH23597	Soybean	cytosol, peroxisome	35.34	36.18
PGSC0003DMT400044918	Potato	cytosol	22.99	34.78
KRH51466	Soybean	peroxisome	32.47	34.77
TraesCS3B01G440500.1	Wheat	cytosol	35.06	33.06
TraesCS3B01G497900.1	Wheat	cytosol	35.06	32.88
TraesCS1B01G234500.1	Wheat	plastid	24.14	31.82
TraesCS4B01G374200.1	Wheat	cytosol	31.03	31.03
TraesCS4B01G374300.1	Wheat	cytosol	31.03	30.95
TraesCS2B01G077800.1	Wheat	cytosol	32.18	30.6
TraesCS2B01G077500.1	Wheat	cytoskeleton, cytosol, peroxisome	31.9	30.58
TraesCS2B01G077600.1	Wheat	cytosol	31.61	29.89
TraesCS3B01G592000.1	Wheat	cytosol	31.9	29.29
TraesCS4B01G335300.2	Wheat	cytosol	29.89	28.65
TraesCS5B01G466400.1	Wheat	cytosol	28.16	27.68
TraesCS1B01G345200.1	Wheat	cytosol	27.87	26.94
TraesCS4B01G374100.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.17	26.12
TraesCS3B01G520100.3	Wheat	cytosol	25.57	22.94

Protein Annotations

EnsemblPlants:TraesCS6B01G145400.1	EnsemblPlantsGene:TraesCS6B01G145400	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF363	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PRINTS:PR00682	SEG:seg	SUPFAM:SSF51197	MapMan:50.1.13	:

Description

No Description!

Coordinates

chr6B:+:145546980..145561507

Molecular Weight (calculated)

39449.1 Da

IEP (calculated)

6.240

GRAVY (calculated)

-0.359

Length

348 amino acids

Sequence
(BLAST)

001: MADEQWSVPM VVQELAASVK EPPSQYVLGE QNRLLVVDQM TESVPIIDLS RLAAADEADK LRAALQSWGL FQVTNHGIES SLMDDVITAS KAFFHQPLEE
101: KQKCSNLLDG KHFQVEGYGN DQIKTQHQTR DWSDRLHLKV GPKDEINLAN WPKHPESFRN VLQEYTAKSK RIKHIILGTM ARLLELEEDY FLNQFSDRAP
201: TTVRINHYVP CPTPDMVLGF KAHSDDGVLA TLLVDNDVAA LQVLRDSVWY SVPTNPRSLL VNIGDFMEVM SNGIFKSPVH RVVANAETER TSIAMFYGLD
301: PEKVIEPAAD LLHQKQPARY KKVKTKDYMA GFYEHFARGT RVLDSMKV

Best Arabidopsis Sequence Match ( AT1G49390.1 )
(BLAST)

001: MEKPKFKTVQ EVVAAGQGLP ERYLHAPTGE GESQPLNGAV PEMDIPAIDL SLLFSSSVDG QEEMKKLHSA LSTWGVVQVM NHGITEAFLD KIYKLTKQFF
101: ALPTEEKHKC ARETGNIQGY GNDMILSDNQ VLDWIDRLFL TTYPEDKRQL KFWPQVPVGF SETLDEYTMK QRVLIEKFFK AMARSLELEE NCFLEMYGEN
201: AVMNSRFNFF PPCPRPDKVI GIKPHADGSA ITLLLPDKDV EGLQFLKDGK WYKAPIVPDT ILITLGDQME IMSNGIYKSP VHRVVTNREK ERISVATFCV
301: PGLDKEIHPA DGLVTEARPR LYKTVTKYVD LHYKYYQQGR RTIEAALI

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9XIA5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.