Factsheet for TraesCS5B01G224800.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G233600.1	Wheat	cytosol, nucleus, peroxisome	96.14	84.94
TraesCS5B01G224900.1	Wheat	cytosol	87.46	76.4
TraesCS6B01G351600.1	Wheat	cytosol	75.88	71.3
Zm00001d030548_P001	Maize	extracellular	64.31	56.66
Os02t0280700-01	Rice	cytosol	63.02	55.84
Os06t0178500-01	Rice	cytosol	62.38	55.43
Os06t0176700-01	Rice	cytosol	62.38	55.43
TraesCS7B01G042000.1	Wheat	cytosol	44.69	53.05
TraesCS7B01G042400.2	Wheat	cytosol	60.13	52.68
KXG19442	Sorghum	cytosol	62.06	52.3
TraesCS7B01G041900.1	Wheat	cytosol	57.23	49.86
TraesCS6B01G145400.1	Wheat	cytosol	55.63	49.71
TraesCS1B01G332300.1	Wheat	cytosol	53.7	48.27
TraesCS7B01G042100.2	Wheat	cytosol	54.34	47.61
TraesCS1B01G332200.1	Wheat	cytosol	53.05	46.61
TraesCS6B01G412800.1	Wheat	cytosol	52.09	45.51
TraesCS7B01G042300.1	Wheat	cytosol	52.09	45.51
Bra002299.1-P	Field mustard	cytosol	22.19	45.1
TraesCS6B01G412700.1	Wheat	cytosol	50.8	44.51
TraesCS7B01G042500.1	Wheat	cytosol	50.8	43.53
TraesCS7B01G042200.3	Wheat	peroxisome	50.8	43.17
PGSC0003DMT400049384	Potato	cytosol	38.59	42.7
VIT_11s0118g00400.t01	Wine grape	peroxisome	37.3	42.34
CDY28799	Canola	cytoskeleton, cytosol, peroxisome	30.55	42.22
Bra022690.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	30.55	42.22
Solyc10g086780.1.1	Tomato	cytosol	39.87	40.0
CDY63243	Canola	mitochondrion	19.29	39.74
KRH60778	Soybean	cytosol, nucleus, peroxisome	44.37	38.76
PGSC0003DMT400073345	Potato	cytosol	43.41	38.03
Solyc06g068270.2.1	Tomato	nucleus	43.41	38.03
TraesCS7B01G041600.1	Wheat	cytosol	45.66	37.97
AT5G20550.1	Thale cress	cytosol	42.44	37.82
Solyc10g076840.1.1	Tomato	cytosol	42.12	37.75
KRH03607	Soybean	cytosol, peroxisome, plastid	42.44	37.61
PGSC0003DMT400049392	Potato	cytosol	41.8	37.46
TraesCS5B01G282100.1	Wheat	golgi	44.05	37.23
Bra006559.1-P	Field mustard	cytosol	41.8	37.14
Solyc07g045040.2.1	Tomato	cytosol	41.8	36.93
CDY56860	Canola	cytosol	41.16	36.89
AT5G20400.1	Thale cress	cytosol	41.16	36.78
AT1G49390.1	Thale cress	cytosol	41.16	36.78
Bra002298.1-P	Field mustard	cytosol	41.16	36.78
CDY51847	Canola	cytosol	41.16	36.78
CDX92465	Canola	cytosol	41.16	36.68
VIT_11s0118g00390.t01	Wine grape	cytosol, nucleus, peroxisome	41.8	36.52
CDY71604	Canola	cytosol	40.84	36.39
VIT_09s0002g08090.t01	Wine grape	cytosol, nucleus, peroxisome	40.84	36.08
VIT_11s0118g00370.t01	Wine grape	plastid	37.3	36.02
AT5G54000.2	Thale cress	cytosol	39.87	35.53
TraesCS3B01G497900.1	Wheat	cytosol	41.16	34.5
KRH51466	Soybean	peroxisome	36.01	34.46
VIT_11s0118g00360.t01	Wine grape	cytosol	44.05	34.42
KRH23597	Soybean	cytosol, peroxisome	35.05	32.06
TraesCS2B01G077500.1	Wheat	cytoskeleton, cytosol, peroxisome	36.33	31.13
TraesCS4B01G374300.1	Wheat	cytosol	34.73	30.95
TraesCS1B01G234500.1	Wheat	plastid	26.05	30.68
TraesCS3B01G440500.1	Wheat	cytosol	36.33	30.62
TraesCS4B01G374200.1	Wheat	cytosol	34.08	30.46
TraesCS2B01G077800.1	Wheat	cytosol	35.37	30.05
TraesCS2B01G077600.1	Wheat	cytosol	35.37	29.89
TraesCS4B01G335300.2	Wheat	cytosol	33.76	28.93
TraesCS3B01G592000.1	Wheat	cytosol	35.05	28.76
PGSC0003DMT400044918	Potato	cytosol	20.9	28.26
TraesCS5B01G466400.1	Wheat	cytosol	32.15	28.25
TraesCS1B01G345200.1	Wheat	cytosol	32.15	27.78
TraesCS4B01G374100.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	32.8	25.37
TraesCS3B01G520100.3	Wheat	cytosol	29.9	23.97

Protein Annotations

EnsemblPlants:TraesCS5B01G224800.1	EnsemblPlantsGene:TraesCS5B01G224800	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF379	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PRINTS:PR00682	SUPFAM:SSF51197	MapMan:50.1.13	:	:

Description

No Description!

Coordinates

chr5B:+:400449314..400451169

Molecular Weight (calculated)

35700.5 Da

IEP (calculated)

6.062

GRAVY (calculated)

-0.530

Length

311 amino acids

Sequence
(BLAST)

001: MPEPIPLIDL SRLMDADEAD KLRAALQTWG FFLATNHGIE DSLMDAMISA SREFFRQPSE EKQKCNNLVD GNGKHYQVEG YGSDKVVSED QGLNWNDRLH
101: LRVEPEDERN FAKWPSHPES FRDVLNEYAS KTKKLRDLVL RSIAKLLEID EDHFVNQISN KASGFARLYY YPPCPRPDLV LGLRPHSDGN LLTILFVDDN
201: VGGLQVQRDG KWYNVPAKPH TLVINLGDCL EIMNNGIFRS PVHRVVTNTE KERLSLAVFY AVDEETVLEP APGLLDDKRP PRYRKMMTKD FVAGLYEHFR
301: QGKRFVDTLK I

Best Arabidopsis Sequence Match ( AT1G49390.1 )
(BLAST)

001: MEKPKFKTVQ EVVAAGQGLP ERYLHAPTGE GESQPLNGAV PEMDIPAIDL SLLFSSSVDG QEEMKKLHSA LSTWGVVQVM NHGITEAFLD KIYKLTKQFF
101: ALPTEEKHKC ARETGNIQGY GNDMILSDNQ VLDWIDRLFL TTYPEDKRQL KFWPQVPVGF SETLDEYTMK QRVLIEKFFK AMARSLELEE NCFLEMYGEN
201: AVMNSRFNFF PPCPRPDKVI GIKPHADGSA ITLLLPDKDV EGLQFLKDGK WYKAPIVPDT ILITLGDQME IMSNGIYKSP VHRVVTNREK ERISVATFCV
301: PGLDKEIHPA DGLVTEARPR LYKTVTKYVD LHYKYYQQGR RTIEAALI

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9XIA5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.