Factsheet for TraesCS5B01G282100.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

peroxisome 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, peroxisome, secretory
MultiLoc:	peroxisome
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G290600.1	Wheat	cytosol	96.2	96.2
TraesCS5A01G283100.2	Wheat	cytosol	92.93	95.8
TraesCS5A01G282800.1	Wheat	cytosol	87.77	93.9
TraesCS5A01G282700.1	Wheat	golgi	93.75	93.75
HORVU5Hr1G075760.1	Barley	cytosol	92.66	92.66
TraesCS6A01G148800.2	Wheat	cytosol	91.3	91.06
TraesCS7B01G041600.1	Wheat	cytosol	58.42	57.49
TraesCS7B01G042000.1	Wheat	cytosol	34.24	48.09
Bra002299.1-P	Field mustard	cytosol	19.57	47.06
TraesCS7B01G042400.2	Wheat	cytosol	45.38	47.04
TraesCS7B01G042100.2	Wheat	cytosol	45.11	46.76
Bra022690.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	28.53	46.67
CDY28799	Canola	cytoskeleton, cytosol, peroxisome	28.53	46.67
TraesCS7B01G041900.1	Wheat	cytosol	44.02	45.38
TraesCS1B01G332200.1	Wheat	cytosol	43.21	44.92
PGSC0003DMT400049384	Potato	cytosol	34.24	44.84
TraesCS1B01G332300.1	Wheat	cytosol	42.12	44.8
TraesCS6B01G145400.1	Wheat	cytosol	41.85	44.25
TraesCS7B01G042300.1	Wheat	cytosol	42.66	44.1
TraesCS5B01G224800.1	Wheat	cytosol, nucleus, peroxisome	37.23	44.05
VIT_11s0118g00400.t01	Wine grape	peroxisome	32.61	43.8
AT1G49390.1	Thale cress	cytosol	41.03	43.39
TraesCS6B01G412700.1	Wheat	cytosol	41.85	43.38
TraesCS6B01G412800.1	Wheat	cytosol	41.85	43.26
Solyc10g086780.1.1	Tomato	cytosol	36.41	43.23
CDY51847	Canola	cytosol	40.76	43.1
Bra006559.1-P	Field mustard	cytosol	40.76	42.86
AT5G20400.1	Thale cress	cytosol	40.49	42.82
AT5G20550.1	Thale cress	cytosol	40.49	42.69
Solyc10g076840.1.1	Tomato	cytosol	39.95	42.36
Bra002298.1-P	Field mustard	cytosol	39.95	42.24
VIT_11s0118g00390.t01	Wine grape	cytosol, nucleus, peroxisome	40.76	42.13
KRH60778	Soybean	cytosol, nucleus, peroxisome	40.76	42.13
CDX92465	Canola	cytosol	39.95	42.12
PGSC0003DMT400049392	Potato	cytosol	39.67	42.07
TraesCS6B01G351600.1	Wheat	cytosol	37.77	41.99
CDY71604	Canola	cytosol	39.67	41.83
CDY56860	Canola	cytosol	39.4	41.79
CDY63243	Canola	mitochondrion	17.12	41.72
VIT_11s0118g00370.t01	Wine grape	plastid	36.41	41.61
KRH03607	Soybean	cytosol, peroxisome, plastid	39.67	41.6
VIT_09s0002g08090.t01	Wine grape	cytosol, nucleus, peroxisome	39.67	41.48
AT5G54000.2	Thale cress	cytosol	38.32	40.4
TraesCS5B01G224900.1	Wheat	cytosol	38.86	40.17
Solyc07g045040.2.1	Tomato	cytosol	38.32	40.06
Solyc06g068270.2.1	Tomato	nucleus	38.59	40.0
PGSC0003DMT400073345	Potato	cytosol	37.77	39.15
TraesCS7B01G042500.1	Wheat	cytosol	38.32	38.84
TraesCS7B01G042200.3	Wheat	peroxisome	38.59	38.8
KRH51466	Soybean	peroxisome	33.15	37.54
VIT_11s0118g00360.t01	Wine grape	cytosol	39.13	36.18
PGSC0003DMT400044918	Potato	cytosol	22.28	35.65
KRH23597	Soybean	cytosol, peroxisome	32.34	35.0
TraesCS3B01G440500.1	Wheat	cytosol	32.34	32.25
TraesCS3B01G497900.1	Wheat	cytosol	31.52	31.27
TraesCS2B01G077800.1	Wheat	cytosol	30.71	30.87
TraesCS1B01G234500.1	Wheat	plastid	22.01	30.68
TraesCS4B01G374300.1	Wheat	cytosol	29.08	30.66
TraesCS2B01G077500.1	Wheat	cytoskeleton, cytosol, peroxisome	30.16	30.58
TraesCS4B01G374200.1	Wheat	cytosol	28.53	30.17
TraesCS2B01G077600.1	Wheat	cytosol	30.16	30.16
TraesCS4B01G335300.2	Wheat	cytosol	29.35	29.75
TraesCS5B01G466400.1	Wheat	cytosol	27.99	29.1
TraesCS3B01G592000.1	Wheat	cytosol	29.08	28.23
TraesCS3B01G520100.3	Wheat	cytosol	29.35	27.84
TraesCS1B01G345200.1	Wheat	cytosol	27.17	27.78
TraesCS4B01G374100.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	27.45	25.12

Protein Annotations

EnsemblPlants:TraesCS5B01G282100.1	EnsemblPlantsGene:TraesCS5B01G282100	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF139	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SEG:seg	SUPFAM:SSF51197	MapMan:50.1.13	:	:

Description

No Description!

Coordinates

chr5B:+:466973656..466975035

Molecular Weight (calculated)

41676.1 Da

IEP (calculated)

4.781

GRAVY (calculated)

-0.204

Length

368 amino acids

Sequence
(BLAST)

001: MVHQDQGKLV QVVAVDVGLV APPSRYVLSE ENRPTTVEQQ AKLVIPIVDV SRLAKPDDVE EAAKLRSALQ SWGLFVVTGH GMPKEFLDEI LEASRKFFHL
101: PLEEKLKCGN VIDGIMFQNE GYGIDRIDSD EQILDWCDRL WLQLQPEDER RLQFWPQNLR DPLHEYTLES GRVTMDVLKA MAKLLNQEEN FFINMVGERF
201: KSYSRFTYYP PCPRPDLVNG LKPHTDNSVI TLLLMDKDVG GLQVLKDGHW VDVPVLGNDL LVVVGEGMEI VSNAIFKAPW HRVVTSADKE RLSLAMFYQP
301: EPERIIGPPG VLVHEKRPAM FKKCLVQTLA DGYWDAFAAG DRTVDFLNVR INAEADAELE ARAVVANN

Best Arabidopsis Sequence Match ( AT1G49390.1 )
(BLAST)

001: MEKPKFKTVQ EVVAAGQGLP ERYLHAPTGE GESQPLNGAV PEMDIPAIDL SLLFSSSVDG QEEMKKLHSA LSTWGVVQVM NHGITEAFLD KIYKLTKQFF
101: ALPTEEKHKC ARETGNIQGY GNDMILSDNQ VLDWIDRLFL TTYPEDKRQL KFWPQVPVGF SETLDEYTMK QRVLIEKFFK AMARSLELEE NCFLEMYGEN
201: AVMNSRFNFF PPCPRPDKVI GIKPHADGSA ITLLLPDKDV EGLQFLKDGK WYKAPIVPDT ILITLGDQME IMSNGIYKSP VHRVVTNREK ERISVATFCV
301: PGLDKEIHPA DGLVTEARPR LYKTVTKYVD LHYKYYQQGR RTIEAALI

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9XIA5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.