Factsheet for TraesCS5A01G282700.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G283100.2	Wheat	cytosol	91.58	94.4
TraesCS5B01G282100.1	Wheat	golgi	93.75	93.75
TraesCS5A01G282800.1	Wheat	cytosol	86.14	92.15
HORVU5Hr1G075760.1	Barley	cytosol	91.3	91.3
TraesCS5D01G290400.1	Wheat	cytosol	92.66	90.69
TraesCS6A01G148800.2	Wheat	cytosol	90.76	90.51
Zm00001d037487_P001	Maize	cytosol	57.07	58.17
Os06t0176300-00	Rice	cytosol	47.83	57.33
Os06t0177600-00	Rice	cytosol	47.83	57.33
EER87955	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	57.88	54.62
TraesCS7A01G140500.1	Wheat	cytosol	31.52	46.59
Bra002299.1-P	Field mustard	cytosol	19.29	46.41
CDY28799	Canola	cytoskeleton, cytosol, peroxisome	27.99	45.78
Bra022690.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	27.99	45.78
TraesCS7A01G141100.1	Wheat	cytosol	45.65	45.78
TraesCS7A01G140600.1	Wheat	cytosol	29.35	45.76
TraesCS7A01G140300.2	Wheat	cytosol	44.57	45.43
TraesCS7A01G140200.1	Wheat	cytosol	41.03	45.35
TraesCS1A01G320000.1	Wheat	cytosol	42.93	44.63
TraesCS4A01G439800.1	Wheat	cytosol	42.93	44.38
TraesCS7A01G140900.1	Wheat	cytosol	42.39	43.7
TraesCS6A01G375200.1	Wheat	cytosol	42.12	43.42
TraesCS7A01G051800.1	Wheat	cytosol	41.85	43.38
TraesCS7A01G051200.1	Wheat	cytosol	41.85	43.26
TraesCS4A01G438300.1	Wheat	cytosol	41.85	43.26
CDY51847	Canola	cytosol	40.49	42.82
AT1G49390.1	Thale cress	cytosol	40.49	42.82
PGSC0003DMT400049384	Potato	cytosol	32.61	42.7
TraesCS7A01G141000.1	Wheat	cytosol	41.3	42.58
Bra006559.1-P	Field mustard	cytosol	40.49	42.57
TraesCS7A01G140100.1	Wheat	cytosol	30.98	42.54
AT5G20400.1	Thale cress	cytosol	40.22	42.53
AT5G20550.1	Thale cress	cytosol	40.22	42.41
VIT_11s0118g00400.t01	Wine grape	peroxisome	31.52	42.34
TraesCS4A01G496600.1	Wheat	cytosol	38.59	42.01
Bra002298.1-P	Field mustard	cytosol	39.67	41.95
CDX92465	Canola	cytosol	39.67	41.83
TraesCS7A01G001400.1	Wheat	cytosol	37.5	41.82
Solyc10g086780.1.1	Tomato	cytosol	35.05	41.61
KRH60778	Soybean	cytosol, nucleus, peroxisome	40.22	41.57
CDY71604	Canola	cytosol	39.4	41.55
CDY56860	Canola	cytosol	39.13	41.5
VIT_09s0002g08090.t01	Wine grape	cytosol, nucleus, peroxisome	39.67	41.48
TraesCS4A01G320100.1	Wheat	cytosol	37.5	41.32
KRH03607	Soybean	cytosol, peroxisome, plastid	39.4	41.31
TraesCS4A01G442500.1	Wheat	cytosol	39.67	41.13
VIT_11s0118g00390.t01	Wine grape	cytosol, nucleus, peroxisome	39.67	41.01
TraesCS6A01G320700.1	Wheat	cytosol	36.68	40.79
VIT_11s0118g00370.t01	Wine grape	plastid	35.6	40.68
Solyc10g076840.1.1	Tomato	cytosol	38.32	40.63
PGSC0003DMT400049392	Potato	cytosol	38.32	40.63
TraesCS7A01G055900.1	Wheat	cytosol	39.13	40.56
CDY63243	Canola	mitochondrion	16.58	40.4
AT5G54000.2	Thale cress	cytosol	38.04	40.11
TraesCS5A01G226400.1	Wheat	cytosol	39.4	40.06
Solyc07g045040.2.1	Tomato	cytosol	37.77	39.49
Solyc06g068270.2.1	Tomato	nucleus	37.77	39.15
TraesCS1A01G320100.1	Wheat	cytosol	42.66	38.67
PGSC0003DMT400073345	Potato	cytosol	36.96	38.31
KRH51466	Soybean	peroxisome	32.88	37.23
TraesCS6A01G375100.1	Wheat	plastid	34.24	36.73
VIT_11s0118g00360.t01	Wine grape	cytosol	39.13	36.18
PGSC0003DMT400044918	Potato	cytosol	22.28	35.65
KRH23597	Soybean	cytosol, peroxisome	31.52	34.12
TraesCS1A01G221200.1	Wheat	cytosol	30.98	32.2
TraesCS3A01G407900.1	Wheat	cytosol	30.98	30.98
TraesCS3A01G407800.1	Wheat	cytosol	30.98	30.89
TraesCS3A01G457700.1	Wheat	cytosol	30.98	30.81
TraesCS3A01G477000.2	Wheat	cytosol	29.35	30.68
TraesCS2A01G065800.1	Wheat	cytosol	30.16	30.33
TraesCS2A01G065600.1	Wheat	cytoskeleton, cytosol, peroxisome	29.62	29.78
TraesCS5A01G457300.1	Wheat	cytosol	27.72	29.39
TraesCS2A01G065400.1	Wheat	cytosol	29.35	29.35
TraesCS2A01G065300.1	Wheat	cytosol	29.35	29.35
TraesCS5A01G539800.1	Wheat	cytosol	27.45	29.02
TraesCS1A01G331300.1	Wheat	cytosol	27.72	28.9
TraesCS5A01G539700.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	26.9	28.78
TraesCS2A01G065500.1	Wheat	cytosol	28.26	28.34
TraesCS3A01G524700.1	Wheat	cytosol	26.9	28.21
TraesCS5A01G539900.1	Wheat	cytosol	24.18	27.99
TraesCS1A01G331400.1	Wheat	cytosol, peroxisome, plastid	26.63	25.26

Protein Annotations

EnsemblPlants:TraesCS5A01G282700.1	EnsemblPlantsGene:TraesCS5A01G282700	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF139	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SUPFAM:SSF51197	MapMan:50.1.13	:	:	:

Description

No Description!

Coordinates

chr5A:-:491317897..491319168

Molecular Weight (calculated)

41469.9 Da

IEP (calculated)

4.828

GRAVY (calculated)

-0.201

Length

368 amino acids

Sequence
(BLAST)

001: MVHQDQGKLV QMVAADVGLV APPSRYVLSE ENRPTTVAQQ AKLVIPIVDA SRVAMPDDVE EAAKLRSALQ SWGLFVVTGH GMPKEFLDEI LEATRKFFHL
101: PLEEKQKCGN VIDGVKFQNE GYGIDRIDSD EQILDWCDRL WLQLQPEDER RLPFWPQNLR DLLHEYTLES GRVTMDVLKA MAKLLNQEEG FFINMVGERF
201: KSYSRFTYYP PCPRPDLVNG LKPHTDKSVI TLLLMDKDVG GFQVLKDGHW VDVPMLGNDL LVVVGEGMEI VSNAIFKAPW HRVVTSADKE RLSLAMFYQP
301: EPERIIGPSG MLVHEKRPAM FKNSLVQTLA DGYWDAFAAG GRTVDFLNVR INAEADAELE GCAVVANN

Best Arabidopsis Sequence Match ( AT1G49390.1 )
(BLAST)

001: MEKPKFKTVQ EVVAAGQGLP ERYLHAPTGE GESQPLNGAV PEMDIPAIDL SLLFSSSVDG QEEMKKLHSA LSTWGVVQVM NHGITEAFLD KIYKLTKQFF
101: ALPTEEKHKC ARETGNIQGY GNDMILSDNQ VLDWIDRLFL TTYPEDKRQL KFWPQVPVGF SETLDEYTMK QRVLIEKFFK AMARSLELEE NCFLEMYGEN
201: AVMNSRFNFF PPCPRPDKVI GIKPHADGSA ITLLLPDKDV EGLQFLKDGK WYKAPIVPDT ILITLGDQME IMSNGIYKSP VHRVVTNREK ERISVATFCV
301: PGLDKEIHPA DGLVTEARPR LYKTVTKYVD LHYKYYQQGR RTIEAALI

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9XIA5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.