Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G412800.1 | Wheat | cytosol | 94.68 | 94.94 |
| TraesCS6D01G359700.1 | Wheat | cytosol | 91.6 | 91.85 |
| HORVU6Hr1G088540.1 | Barley | cytosol | 90.2 | 90.2 |
| HORVU6Hr1G088470.1 | Barley | cytosol | 89.92 | 89.92 |
| TraesCS7A01G140600.1 | Wheat | cytosol | 44.54 | 67.37 |
| TraesCS7A01G140500.1 | Wheat | cytosol | 46.5 | 66.67 |
| TraesCS7A01G141000.1 | Wheat | cytosol | 66.11 | 66.11 |
| TraesCS6A01G375100.1 | Wheat | plastid | 58.54 | 60.93 |
| EER88660 | Sorghum | cytosol | 62.47 | 60.76 |
| TraesCS6A01G320700.1 | Wheat | cytosol | 47.62 | 51.36 |
| TraesCS4A01G320100.1 | Wheat | cytosol | 47.9 | 51.2 |
| TraesCS4A01G496600.1 | Wheat | cytosol | 47.9 | 50.59 |
| TraesCS7A01G001400.1 | Wheat | cytosol | 45.94 | 49.7 |
| TraesCS5A01G226400.1 | Wheat | cytosol | 49.3 | 48.62 |
| TraesCS7A01G141100.1 | Wheat | cytosol | 49.02 | 47.68 |
| TraesCS4A01G439800.1 | Wheat | cytosol | 47.34 | 47.47 |
| TraesCS4A01G438300.1 | Wheat | cytosol | 47.34 | 47.47 |
| TraesCS7A01G051200.1 | Wheat | cytosol | 47.06 | 47.19 |
| TraesCS1A01G320000.1 | Wheat | cytosol | 46.5 | 46.89 |
| TraesCS7A01G051800.1 | Wheat | cytosol | 46.22 | 46.48 |
| TraesCS7A01G140300.2 | Wheat | cytosol | 46.5 | 45.98 |
| Bra002299.1-P | Field mustard | cytosol | 19.61 | 45.75 |
| VIT_11s0118g00400.t01 | Wine grape | peroxisome | 35.01 | 45.62 |
| TraesCS7A01G140900.1 | Wheat | cytosol | 45.38 | 45.38 |
| TraesCS7A01G140200.1 | Wheat | cytosol | 42.3 | 45.35 |
| Bra022690.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 28.57 | 45.33 |
| CDY28799 | Canola | cytoskeleton, cytosol, peroxisome | 28.57 | 45.33 |
| TraesCS4A01G442500.1 | Wheat | cytosol | 44.26 | 44.51 |
| TraesCS7A01G055900.1 | Wheat | cytosol | 44.26 | 44.51 |
| TraesCS5A01G283100.2 | Wheat | cytosol | 43.42 | 43.42 |
| KRH60778 | Soybean | cytosol, nucleus, peroxisome | 43.14 | 43.26 |
| Solyc10g086780.1.1 | Tomato | cytosol | 37.53 | 43.23 |
| KRH03607 | Soybean | cytosol, peroxisome, plastid | 42.02 | 42.73 |
| PGSC0003DMT400049392 | Potato | cytosol | 41.18 | 42.36 |
| PGSC0003DMT400049384 | Potato | cytosol | 33.33 | 42.35 |
| TraesCS5A01G282700.1 | Wheat | golgi | 43.42 | 42.12 |
| Solyc10g076840.1.1 | Tomato | cytosol | 40.9 | 42.07 |
| TraesCS1A01G320100.1 | Wheat | cytosol | 47.06 | 41.38 |
| VIT_11s0118g00390.t01 | Wine grape | cytosol, nucleus, peroxisome | 41.18 | 41.29 |
| Solyc07g045040.2.1 | Tomato | cytosol | 40.62 | 41.19 |
| AT5G20400.1 | Thale cress | cytosol | 40.06 | 41.09 |
| TraesCS7A01G140100.1 | Wheat | cytosol | 30.81 | 41.04 |
| VIT_11s0118g00370.t01 | Wine grape | plastid | 36.97 | 40.99 |
| TraesCS5A01G282800.1 | Wheat | cytosol | 39.5 | 40.99 |
| TraesCS6A01G148800.2 | Wheat | cytosol | 42.02 | 40.65 |
| CDY51847 | Canola | cytosol | 39.5 | 40.52 |
| CDY56860 | Canola | cytosol | 39.22 | 40.35 |
| Bra006559.1-P | Field mustard | cytosol | 39.5 | 40.29 |
| Bra002298.1-P | Field mustard | cytosol | 39.22 | 40.23 |
| CDX92465 | Canola | cytosol | 39.22 | 40.11 |
| Solyc06g068270.2.1 | Tomato | nucleus | 39.78 | 40.0 |
| PGSC0003DMT400073345 | Potato | cytosol | 39.78 | 40.0 |
| CDY71604 | Canola | cytosol | 38.94 | 39.83 |
| VIT_09s0002g08090.t01 | Wine grape | cytosol, nucleus, peroxisome | 38.94 | 39.49 |
| KRH51466 | Soybean | peroxisome | 35.57 | 39.08 |
| AT5G20550.1 | Thale cress | cytosol | 38.1 | 38.97 |
| VIT_11s0118g00360.t01 | Wine grape | cytosol | 43.14 | 38.69 |
| CDY63243 | Canola | mitochondrion | 16.25 | 38.41 |
| AT1G49390.1 | Thale cress | cytosol | 37.25 | 38.22 |
| AT5G54000.2 | Thale cress | cytosol | 36.97 | 37.82 |
| TraesCS3A01G457700.1 | Wheat | cytosol | 37.25 | 35.95 |
| TraesCS1A01G221200.1 | Wheat | cytosol | 34.73 | 35.03 |
| PGSC0003DMT400044918 | Potato | cytosol | 22.41 | 34.78 |
| KRH23597 | Soybean | cytosol, peroxisome | 32.77 | 34.41 |
| TraesCS3A01G407900.1 | Wheat | cytosol | 34.73 | 33.7 |
| TraesCS3A01G407800.1 | Wheat | cytosol | 33.61 | 32.52 |
| TraesCS5A01G539900.1 | Wheat | cytosol | 27.45 | 30.82 |
| TraesCS5A01G539700.2 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 29.69 | 30.81 |
| TraesCS5A01G539800.1 | Wheat | cytosol | 29.97 | 30.75 |
| TraesCS2A01G065800.1 | Wheat | cytosol | 31.37 | 30.6 |
| TraesCS2A01G065600.1 | Wheat | cytoskeleton, cytosol, peroxisome | 31.09 | 30.33 |
| TraesCS2A01G065400.1 | Wheat | cytosol | 30.81 | 29.89 |
| TraesCS3A01G524700.1 | Wheat | cytosol | 29.13 | 29.63 |
| TraesCS2A01G065300.1 | Wheat | cytosol | 30.25 | 29.35 |
| TraesCS2A01G065500.1 | Wheat | cytosol | 29.41 | 28.61 |
| TraesCS5A01G457300.1 | Wheat | cytosol | 27.73 | 28.53 |
| TraesCS3A01G477000.2 | Wheat | cytosol | 27.73 | 28.12 |
| TraesCS1A01G331300.1 | Wheat | cytosol | 27.45 | 27.76 |
| TraesCS1A01G331400.1 | Wheat | cytosol, peroxisome, plastid | 26.61 | 24.48 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G375200.1 | EnsemblPlantsGene:TraesCS6A01G375200 | Gene3D:2.60.120.330 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF114 | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | SEG:seg | SUPFAM:SSF51197 | MapMan:50.1.13 | : | : |
Description
No Description!
Coordinates
chr6A:-:597782055..597784111
Molecular Weight (calculated)
40232.4 Da
IEP (calculated)
4.543
GRAVY (calculated)
-0.224
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MSYGQQFKIR EVPPIVQELV AGGVQEPPGQ YVVPEQDRPA AAAVSEIPEP IPVVDLSRLS ANSADELAKL QSALQNWDLF LAVGHGMEPG FLAEVTKAVR
101: EFFKLPLEEK QKYSNIVDGE KMSSDGYGND MVVVENQVLD WNDRLSLLVE PESERAYALW PTQPPSFRDI LCEYTVRCRP VANLMLQNLA KLLNLQEEYL
201: TTMLGEKSLT QAIINYYPRC PKPDHVLGLK PHTDASMITV NFIDDDVSGL QLQKNDIWYN VPIVPNALVV NIGDVMEVVS NGLFKSLVHR VVTNAEKERL
301: SLVMFYELDP EAEIEPVPEL VDDKRPRRYG KMKSKDYLAK FFDTYATGKL AIDSMKI
101: EFFKLPLEEK QKYSNIVDGE KMSSDGYGND MVVVENQVLD WNDRLSLLVE PESERAYALW PTQPPSFRDI LCEYTVRCRP VANLMLQNLA KLLNLQEEYL
201: TTMLGEKSLT QAIINYYPRC PKPDHVLGLK PHTDASMITV NFIDDDVSGL QLQKNDIWYN VPIVPNALVV NIGDVMEVVS NGLFKSLVHR VVTNAEKERL
301: SLVMFYELDP EAEIEPVPEL VDDKRPRRYG KMKSKDYLAK FFDTYATGKL AIDSMKI
001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.