Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G412800.1 | Wheat | cytosol | 92.42 | 92.42 |
| TraesCS6A01G375200.1 | Wheat | cytosol | 91.85 | 91.6 |
| HORVU6Hr1G088540.1 | Barley | cytosol | 87.36 | 87.11 |
| HORVU6Hr1G088470.1 | Barley | cytosol | 87.08 | 86.83 |
| TraesCS6D01G359300.1 | Wheat | cytosol | 73.03 | 73.24 |
| TraesCS6D01G359600.1 | Wheat | cytosol | 33.99 | 71.6 |
| TraesCS7D01G142000.2 | Wheat | cytosol | 66.85 | 67.04 |
| TraesCS7D01G142200.1 | Wheat | cytosol | 65.73 | 65.55 |
| EER88660 | Sorghum | cytosol | 61.24 | 59.4 |
| TraesCS5D01G565100.1 | Wheat | cytosol | 49.16 | 52.4 |
| TraesCS6D01G300600.1 | Wheat | cytosol | 46.63 | 50.15 |
| TraesCS5D01G233600.1 | Wheat | cytosol, nucleus, peroxisome | 49.44 | 50.0 |
| TraesCS7D01G046300.1 | Wheat | cytosol | 18.26 | 50.0 |
| TraesCS7D01G142300.1 | Wheat | cytosol | 49.72 | 49.86 |
| TraesCS7D01G142400.1 | Wheat | cytosol | 50.84 | 48.92 |
| TraesCS7D01G046400.1 | Wheat | cytosol | 23.31 | 48.82 |
| TraesCS5D01G233700.1 | Wheat | cytosol | 48.6 | 48.6 |
| TraesCS7D01G141600.1 | Wheat | cytosol, mitochondrion, peroxisome | 48.6 | 48.46 |
| TraesCS7D01G141900.1 | Wheat | cytosol | 48.6 | 48.46 |
| TraesCS6D01G107100.1 | Wheat | cytosol | 45.79 | 46.84 |
| TraesCS1D01G319800.1 | Wheat | cytosol | 25.28 | 46.63 |
| Bra002299.1-P | Field mustard | cytosol | 19.94 | 46.41 |
| TraesCS7D01G046100.1 | Wheat | cytosol | 46.07 | 46.07 |
| CDY28799 | Canola | cytoskeleton, cytosol, peroxisome | 28.93 | 45.78 |
| Bra022690.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 28.93 | 45.78 |
| VIT_11s0118g00400.t01 | Wine grape | peroxisome | 34.55 | 44.89 |
| TraesCS7D01G050500.1 | Wheat | cytosol | 44.66 | 44.79 |
| TraesCS1D01G319700.1 | Wheat | cytosol | 45.51 | 44.75 |
| TraesCS5D01G233800.1 | Wheat | cytosol | 38.2 | 44.3 |
| TraesCS6D01G138200.1 | Wheat | cytosol | 45.79 | 44.29 |
| TraesCS5D01G290600.1 | Wheat | cytosol | 45.79 | 44.29 |
| TraesCS5D01G289800.1 | Wheat | cytosol, mitochondrion | 45.51 | 44.02 |
| KRH60778 | Soybean | cytosol, nucleus, peroxisome | 43.82 | 43.82 |
| Solyc10g086780.1.1 | Tomato | cytosol | 37.36 | 42.9 |
| KRH03607 | Soybean | cytosol, peroxisome, plastid | 41.85 | 42.45 |
| Solyc07g045040.2.1 | Tomato | cytosol | 41.85 | 42.33 |
| PGSC0003DMT400049392 | Potato | cytosol | 41.01 | 42.07 |
| TraesCS5D01G290400.1 | Wheat | cytosol | 44.1 | 41.76 |
| PGSC0003DMT400049384 | Potato | cytosol | 32.87 | 41.64 |
| TraesCS5D01G007400.1 | Wheat | cytosol | 41.85 | 41.39 |
| Solyc10g076840.1.1 | Tomato | cytosol | 40.17 | 41.21 |
| Solyc06g068270.2.1 | Tomato | nucleus | 41.01 | 41.13 |
| AT5G20400.1 | Thale cress | cytosol | 40.17 | 41.09 |
| CDY51847 | Canola | cytosol | 40.17 | 41.09 |
| VIT_11s0118g00390.t01 | Wine grape | cytosol, nucleus, peroxisome | 41.01 | 41.01 |
| VIT_11s0118g00370.t01 | Wine grape | plastid | 37.08 | 40.99 |
| Bra006559.1-P | Field mustard | cytosol | 40.17 | 40.86 |
| PGSC0003DMT400073345 | Potato | cytosol | 40.73 | 40.85 |
| CDY71604 | Canola | cytosol | 39.61 | 40.4 |
| CDY56860 | Canola | cytosol | 39.33 | 40.35 |
| Bra002298.1-P | Field mustard | cytosol | 39.33 | 40.23 |
| CDX92465 | Canola | cytosol | 39.33 | 40.11 |
| VIT_09s0002g08090.t01 | Wine grape | cytosol, nucleus, peroxisome | 39.33 | 39.77 |
| TraesCS7D01G142100.1 | Wheat | cytosol, nucleus, peroxisome | 46.91 | 39.39 |
| KRH51466 | Soybean | peroxisome | 35.96 | 39.38 |
| AT5G20550.1 | Thale cress | cytosol | 38.2 | 38.97 |
| AT1G49390.1 | Thale cress | cytosol | 37.64 | 38.51 |
| CDY63243 | Canola | mitochondrion | 16.29 | 38.41 |
| TraesCS5D01G007300.1 | Wheat | cytosol | 20.79 | 38.34 |
| VIT_11s0118g00360.t01 | Wine grape | cytosol | 42.7 | 38.19 |
| AT5G54000.2 | Thale cress | cytosol | 36.8 | 37.54 |
| TraesCS3D01G450500.1 | Wheat | cytosol | 37.36 | 36.04 |
| TraesCS3D01G013500.1 | Wheat | mitochondrion | 16.85 | 35.5 |
| TraesCS1D01G222800.1 | Wheat | cytosol | 35.11 | 35.31 |
| KRH23597 | Soybean | cytosol, peroxisome | 33.15 | 34.71 |
| PGSC0003DMT400044918 | Potato | cytosol | 22.19 | 34.35 |
| TraesCS3D01G403000.1 | Wheat | cytosol | 32.58 | 31.44 |
| TraesCS4D01G363100.1 | Wheat | cytosol | 29.78 | 30.37 |
| TraesCS2D01G063700.1 | Wheat | cytoskeleton, cytosol, peroxisome | 30.9 | 30.22 |
| TraesCS4D01G363200.1 | Wheat | cytosol | 29.49 | 30.17 |
| TraesCS2D01G064100.1 | Wheat | cytosol | 30.9 | 30.05 |
| TraesCS2D01G063500.1 | Wheat | cytosol | 30.9 | 29.89 |
| TraesCS2D01G064000.1 | Wheat | cytosol | 22.75 | 29.89 |
| TraesCS4D01G363000.1 | Wheat | cytosol | 30.06 | 29.89 |
| TraesCS3D01G529900.1 | Wheat | cytosol | 29.21 | 29.63 |
| TraesCS2D01G063400.1 | Wheat | cytosol | 30.62 | 29.62 |
| TraesCS4D01G330600.1 | Wheat | cytosol | 29.49 | 28.85 |
| TraesCS4D01G363300.1 | Wheat | cytosol | 27.53 | 28.74 |
| TraesCS2D01G063800.1 | Wheat | cytoskeleton, cytosol, peroxisome | 29.49 | 28.69 |
| TraesCS3D01G471500.2 | Wheat | cytosol | 27.53 | 27.84 |
| TraesCS2D01G063600.1 | Wheat | cytosol | 28.65 | 27.79 |
| TraesCS5D01G468100.1 | Wheat | cytosol | 26.97 | 27.12 |
| TraesCS1D01G333300.1 | Wheat | cytosol | 19.38 | 21.04 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G359700.1 | EnsemblPlantsGene:TraesCS6D01G359700 | Gene3D:2.60.120.330 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF114 | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | SUPFAM:SSF51197 | MapMan:50.1.13 | : | : | : |
Description
No Description!
Coordinates
chr6D:-:451856724..451861831
Molecular Weight (calculated)
40551.0 Da
IEP (calculated)
4.943
GRAVY (calculated)
-0.230
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MSYGQQFKIR EVPPIVQELV AGGVQEPPRQ YVVPEQDRPT AAVSEMPEPI PVVDLSRLSA NSADELAKLQ SALQSWDLFL VVGHGMDPSF LAEVMKAMRE
101: FFKLPLEEKQ KYSNIVDGKK MSSDGYGNDM VVMENQVLDW NDRLSLQLEP ESERAYARWP TQPPSFRDIL CEYTVRCRAV ANIILQNLAK LLNLQEEYLT
201: TMLGEKSLTH AIINYYPRCP MPDHVLGLKP HTDASMITVN FIDADVSGLQ LQKNCIWYNV PIVPNALVVN IGDVMEIVSN GFFKSLVHRV VTNAEKERLS
301: LVMFYALDPE AEIEPVQELV DDQRPRRYRK MKSKDYLAKF FDTYATGKLA IDSMRI
101: FFKLPLEEKQ KYSNIVDGKK MSSDGYGNDM VVMENQVLDW NDRLSLQLEP ESERAYARWP TQPPSFRDIL CEYTVRCRAV ANIILQNLAK LLNLQEEYLT
201: TMLGEKSLTH AIINYYPRCP MPDHVLGLKP HTDASMITVN FIDADVSGLQ LQKNCIWYNV PIVPNALVVN IGDVMEIVSN GFFKSLVHRV VTNAEKERLS
301: LVMFYALDPE AEIEPVQELV DDQRPRRYRK MKSKDYLAKF FDTYATGKLA IDSMRI
001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.