Factsheet for TraesCS6B01G412800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G375200.1	Wheat	cytosol	94.94	94.68
TraesCS6D01G359700.1	Wheat	cytosol	92.42	92.42
HORVU6Hr1G088540.1	Barley	cytosol	89.33	89.08
HORVU6Hr1G088470.1	Barley	cytosol	89.04	88.8
TraesCS6B01G412700.1	Wheat	cytosol	75.0	75.21
TraesCS7B01G042000.1	Wheat	cytosol	50.84	69.08
TraesCS7B01G042100.2	Wheat	cytosol	68.26	68.45
TraesCS7B01G042300.1	Wheat	cytosol	66.57	66.57
EER88660	Sorghum	cytosol	62.36	60.49
TraesCS6B01G351600.1	Wheat	cytosol	48.6	52.27
TraesCS5B01G224800.1	Wheat	cytosol, nucleus, peroxisome	45.51	52.09
TraesCS7B01G042500.1	Wheat	cytosol	52.81	51.79
TraesCS5B01G224900.1	Wheat	cytosol	48.88	48.88
TraesCS7B01G042400.2	Wheat	cytosol	48.31	48.45
TraesCS6B01G145400.1	Wheat	cytosol	46.35	47.41
TraesCS1B01G332300.1	Wheat	cytosol	45.22	46.53
TraesCS7B01G041900.1	Wheat	cytosol	46.35	46.22
TraesCS1B01G332200.1	Wheat	cytosol	45.79	46.05
VIT_11s0118g00400.t01	Wine grape	peroxisome	35.39	45.99
Bra002299.1-P	Field mustard	cytosol	19.66	45.75
CDY28799	Canola	cytoskeleton, cytosol, peroxisome	28.65	45.33
Bra022690.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	28.65	45.33
KRH03607	Soybean	cytosol, peroxisome, plastid	42.7	43.3
KRH60778	Soybean	cytosol, nucleus, peroxisome	43.26	43.26
Solyc10g086780.1.1	Tomato	cytosol	37.64	43.23
PGSC0003DMT400049392	Potato	cytosol	41.29	42.36
PGSC0003DMT400049384	Potato	cytosol	33.43	42.35
Solyc10g076840.1.1	Tomato	cytosol	41.01	42.07
VIT_11s0118g00390.t01	Wine grape	cytosol, nucleus, peroxisome	41.85	41.85
TraesCS5B01G282100.1	Wheat	golgi	43.26	41.85
Solyc07g045040.2.1	Tomato	cytosol	41.29	41.76
VIT_11s0118g00370.t01	Wine grape	plastid	37.36	41.3
TraesCS7B01G041600.1	Wheat	cytosol	42.7	40.64
PGSC0003DMT400073345	Potato	cytosol	40.45	40.56
AT5G20400.1	Thale cress	cytosol	39.61	40.52
CDY51847	Canola	cytosol	39.61	40.52
Bra006559.1-P	Field mustard	cytosol	39.61	40.29
Solyc06g068270.2.1	Tomato	nucleus	40.17	40.28
CDY71604	Canola	cytosol	39.33	40.11
VIT_09s0002g08090.t01	Wine grape	cytosol, nucleus, peroxisome	39.61	40.06
CDY56860	Canola	cytosol	38.76	39.77
Bra002298.1-P	Field mustard	cytosol	38.76	39.66
CDX92465	Canola	cytosol	38.76	39.54
KRH51466	Soybean	peroxisome	35.39	38.77
VIT_11s0118g00360.t01	Wine grape	cytosol	43.26	38.69
CDY63243	Canola	mitochondrion	16.29	38.41
AT5G20550.1	Thale cress	cytosol	37.64	38.4
TraesCS7B01G042200.3	Wheat	peroxisome	39.33	38.25
AT1G49390.1	Thale cress	cytosol	37.08	37.93
AT5G54000.2	Thale cress	cytosol	37.08	37.82
TraesCS3B01G497900.1	Wheat	cytosol	38.2	36.66
KRH23597	Soybean	cytosol, peroxisome	33.99	35.59
PGSC0003DMT400044918	Potato	cytosol	22.75	35.22
TraesCS1B01G234500.1	Wheat	plastid	25.0	33.71
TraesCS3B01G440500.1	Wheat	cytosol	34.27	33.06
TraesCS4B01G374300.1	Wheat	cytosol	30.62	31.23
TraesCS4B01G374200.1	Wheat	cytosol	30.06	30.75
TraesCS2B01G077500.1	Wheat	cytoskeleton, cytosol, peroxisome	30.9	30.3
TraesCS2B01G077600.1	Wheat	cytosol	31.18	30.16
TraesCS2B01G077800.1	Wheat	cytosol	30.9	30.05
TraesCS4B01G335300.2	Wheat	cytosol	30.06	29.48
TraesCS3B01G592000.1	Wheat	cytosol	31.18	29.29
TraesCS5B01G466400.1	Wheat	cytosol	27.25	27.4
TraesCS1B01G345200.1	Wheat	cytosol	26.97	26.67
TraesCS4B01G374100.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	29.49	26.12
TraesCS3B01G520100.3	Wheat	cytosol	26.4	24.23

Protein Annotations

EnsemblPlants:TraesCS6B01G412800.1	EnsemblPlantsGene:TraesCS6B01G412800	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF114	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SEG:seg	SUPFAM:SSF51197	MapMan:50.1.13	:	:

Description

No Description!

Coordinates

chr6B:-:686213765..686215778

Molecular Weight (calculated)

40212.4 Da

IEP (calculated)

4.662

GRAVY (calculated)

-0.191

Length

356 amino acids

Sequence
(BLAST)

001: MSYGQQFNIR EVPPIVQELV ASGVQEPPGQ YVVPEKDRPA TAVSEMPEPI PIVDLSRLSA NSADELAKLQ SALQNWDLFL AVGHGMEPSF LAEVMKAARE
101: FFKLPLEEKQ KYSNIVDGKK MSSDGYGNDM VVVENQVLDW NDRLSLLVEP ASERAYALWP TQPPSFRDIL CEYTVRCRAV ANLILQNLAK LLNLQEEYLT
201: TMLGEKSLTQ AIINYYPWCP TPDHVLGLKP HTDASMITVN FIDDDVSGLQ LQKNDIWYNV PIVPNALVVN IGDVMEVVSN GLFKSLVHRV VTNAEKERLS
301: LVMFYALDPE AEIEPVPELV DDKRPRRYRK MKSKDYLAKF FDTYATGKLA IDSMKI

Best Arabidopsis Sequence Match ( AT1G17010.1 )
(BLAST)

001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.