Factsheet for TraesCS6B01G351600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G320700.1	Wheat	cytosol	96.37	96.37
TraesCS6D01G300600.1	Wheat	cytosol	93.66	93.66
HORVU6Hr1G078640.9	Barley	cytosol, peroxisome	94.86	93.18
TraesCS5B01G224800.1	Wheat	cytosol, nucleus, peroxisome	71.3	75.88
TraesCS5B01G224900.1	Wheat	cytosol	77.95	72.47
Zm00001d030548_P001	Maize	extracellular	64.35	60.34
Os02t0280700-01	Rice	cytosol	61.63	58.12
Os06t0178500-01	Rice	cytosol	61.03	57.71
Os06t0176700-01	Rice	cytosol	61.03	57.71
TraesCS7B01G042400.2	Wheat	cytosol	58.61	54.65
KXG19442	Sorghum	cytosol	58.31	52.3
TraesCS6B01G145400.1	Wheat	cytosol	54.08	51.44
TraesCS7B01G042100.2	Wheat	cytosol	53.17	49.58
TraesCS7B01G042000.1	Wheat	cytosol	38.67	48.85
TraesCS7B01G041900.1	Wheat	cytosol	52.57	48.74
TraesCS6B01G412800.1	Wheat	cytosol	52.27	48.6
TraesCS7B01G042300.1	Wheat	cytosol	51.96	48.31
TraesCS6B01G412700.1	Wheat	cytosol	51.66	48.17
TraesCS1B01G332300.1	Wheat	cytosol	49.85	47.69
TraesCS1B01G332200.1	Wheat	cytosol	48.34	45.2
TraesCS7B01G042500.1	Wheat	cytosol	49.24	44.9
TraesCS7B01G042200.3	Wheat	peroxisome	48.64	43.99
Bra002299.1-P	Field mustard	cytosol	19.03	41.18
PGSC0003DMT400049384	Potato	cytosol	34.44	40.57
VIT_11s0118g00400.t01	Wine grape	peroxisome	32.93	39.78
Solyc06g068270.2.1	Tomato	nucleus	41.69	38.87
Solyc10g086780.1.1	Tomato	cytosol	36.25	38.71
Bra022690.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	26.28	38.67
CDY28799	Canola	cytoskeleton, cytosol, peroxisome	26.28	38.67
PGSC0003DMT400073345	Potato	cytosol	41.39	38.59
KRH60778	Soybean	cytosol, nucleus, peroxisome	41.39	38.48
VIT_11s0118g00370.t01	Wine grape	plastid	37.16	38.2
CDY71604	Canola	cytosol	40.18	38.11
PGSC0003DMT400049392	Potato	cytosol	39.88	38.04
Bra006559.1-P	Field mustard	cytosol	40.18	38.0
CDY51847	Canola	cytosol	39.88	37.93
TraesCS5B01G282100.1	Wheat	golgi	41.99	37.77
Solyc10g076840.1.1	Tomato	cytosol	39.58	37.75
CDY63243	Canola	mitochondrion	17.22	37.75
Bra002298.1-P	Field mustard	cytosol	39.58	37.64
CDX92465	Canola	cytosol	39.58	37.54
CDY56860	Canola	cytosol	39.27	37.46
TraesCS7B01G041600.1	Wheat	cytosol	42.3	37.43
VIT_11s0118g00390.t01	Wine grape	cytosol, nucleus, peroxisome	40.18	37.36
AT1G49390.1	Thale cress	cytosol	39.27	37.36
KRH03607	Soybean	cytosol, peroxisome, plastid	39.58	37.32
AT5G20400.1	Thale cress	cytosol	38.97	37.07
AT5G20550.1	Thale cress	cytosol	38.67	36.68
VIT_09s0002g08090.t01	Wine grape	cytosol, nucleus, peroxisome	38.97	36.65
Solyc07g045040.2.1	Tomato	cytosol	38.67	36.36
AT5G54000.2	Thale cress	cytosol	37.46	35.53
KRH51466	Soybean	peroxisome	33.23	33.85
TraesCS3B01G497900.1	Wheat	cytosol	37.46	33.42
VIT_11s0118g00360.t01	Wine grape	cytosol	40.18	33.42
KRH23597	Soybean	cytosol, peroxisome	34.14	33.24
TraesCS2B01G077500.1	Wheat	cytoskeleton, cytosol, peroxisome	34.14	31.13
TraesCS3B01G440500.1	Wheat	cytosol	34.14	30.62
PGSC0003DMT400044918	Potato	cytosol	21.15	30.43
TraesCS2B01G077800.1	Wheat	cytosol	33.23	30.05
TraesCS4B01G335300.2	Wheat	cytosol	32.93	30.03
TraesCS2B01G077600.1	Wheat	cytosol	33.23	29.89
TraesCS4B01G374200.1	Wheat	cytosol	31.12	29.6
TraesCS4B01G374300.1	Wheat	cytosol	31.12	29.51
TraesCS1B01G234500.1	Wheat	plastid	23.26	29.17
TraesCS3B01G592000.1	Wheat	cytosol	32.02	27.97
TraesCS5B01G466400.1	Wheat	cytosol	28.7	26.84
TraesCS1B01G345200.1	Wheat	cytosol	28.1	25.83
TraesCS4B01G374100.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.21	24.88
TraesCS3B01G520100.3	Wheat	cytosol	27.49	23.45

Protein Annotations

EnsemblPlants:TraesCS6B01G351600.1	EnsemblPlantsGene:TraesCS6B01G351600	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF379	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PRINTS:PR00682	SUPFAM:SSF51197	MapMan:50.1.13	:	:

Description

No Description!

Coordinates

chr6B:+:617038049..617039512

Molecular Weight (calculated)

37777.1 Da

IEP (calculated)

5.601

GRAVY (calculated)

-0.421

Length

331 amino acids

Sequence
(BLAST)

001: MVRTTVQELA AAVEEPPRQY VVHERDQDHL LAADEMPDPI PLIDLSRLTA ADEAHKLREA LQTWGLFLVT NHGIEESLMD AMMSASRDFF RQPSEEKHKC
101: SNLVDDGKHL EVEGYGNDKV VSPQDQGLSW NDRLHLRVEP EDERNFAKWP THPQSFRDVL LKYASRTKRI RDLILRSIAK ILDLDEDYFV NQISNKARGF
201: ARFNYYPPCP RPDLVLGMRP HSDVGLLTIL SVDHDVGGLQ VQRDGKWYNV PAKPYTLVIN LADCMEIMCN GIFMSPVHRV VTNATKERLS LGVFYVVDGE
301: TVLEPAPGLL DDKRPPRYGK FKAMDFGFSF D

Best Arabidopsis Sequence Match ( AT1G49390.1 )
(BLAST)

001: MEKPKFKTVQ EVVAAGQGLP ERYLHAPTGE GESQPLNGAV PEMDIPAIDL SLLFSSSVDG QEEMKKLHSA LSTWGVVQVM NHGITEAFLD KIYKLTKQFF
101: ALPTEEKHKC ARETGNIQGY GNDMILSDNQ VLDWIDRLFL TTYPEDKRQL KFWPQVPVGF SETLDEYTMK QRVLIEKFFK AMARSLELEE NCFLEMYGEN
201: AVMNSRFNFF PPCPRPDKVI GIKPHADGSA ITLLLPDKDV EGLQFLKDGK WYKAPIVPDT ILITLGDQME IMSNGIYKSP VHRVVTNREK ERISVATFCV
301: PGLDKEIHPA DGLVTEARPR LYKTVTKYVD LHYKYYQQGR RTIEAALI

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9XIA5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.