Factsheet for TraesCS1B01G332300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G319800.1	Wheat	cytosol	52.6	94.3
TraesCS1B01G332200.1	Wheat	cytosol	86.13	84.18
TraesCS1A01G320100.1	Wheat	cytosol	96.24	82.02
TraesCS7B01G041900.1	Wheat	cytosol	72.25	70.03
Zm00001d045145_P001	Maize	peroxisome	60.4	58.54
EER87956	Sorghum	peroxisome	59.83	57.02
TraesCS5B01G224800.1	Wheat	cytosol, nucleus, peroxisome	48.27	53.7
TraesCS7B01G042000.1	Wheat	cytosol	40.46	53.44
TraesCS7B01G042400.2	Wheat	cytosol	52.02	50.7
TraesCS6B01G351600.1	Wheat	cytosol	47.69	49.85
TraesCS7B01G042100.2	Wheat	cytosol	50.87	49.58
TraesCS5B01G224900.1	Wheat	cytosol	49.71	48.31
TraesCS6B01G145400.1	Wheat	cytosol	47.98	47.7
TraesCS7B01G042300.1	Wheat	cytosol	48.84	47.47
Bra002299.1-P	Field mustard	cytosol	20.52	46.41
Bra022690.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	30.06	46.22
CDY28799	Canola	cytoskeleton, cytosol, peroxisome	30.06	46.22
TraesCS6B01G412800.1	Wheat	cytosol	46.53	45.22
TraesCS7B01G042500.1	Wheat	cytosol	46.82	44.63
TraesCS6B01G412700.1	Wheat	cytosol	45.38	44.23
VIT_11s0118g00400.t01	Wine grape	peroxisome	34.68	43.8
KRH60778	Soybean	cytosol, nucleus, peroxisome	44.51	43.26
PGSC0003DMT400049392	Potato	cytosol	42.49	42.36
Solyc10g086780.1.1	Tomato	cytosol	37.86	42.26
TraesCS5B01G282100.1	Wheat	golgi	44.8	42.12
PGSC0003DMT400049384	Potato	cytosol	34.1	41.99
TraesCS7B01G041600.1	Wheat	cytosol	45.38	41.98
KRH03607	Soybean	cytosol, peroxisome, plastid	42.49	41.88
Bra002298.1-P	Field mustard	cytosol	41.33	41.09
CDY63243	Canola	mitochondrion	17.92	41.06
TraesCS7B01G042200.3	Wheat	peroxisome	43.35	40.98
CDX92465	Canola	cytosol	41.33	40.97
PGSC0003DMT400073345	Potato	cytosol	41.62	40.56
AT5G20400.1	Thale cress	cytosol	40.75	40.52
VIT_11s0118g00360.t01	Wine grape	cytosol	46.53	40.45
CDY56860	Canola	cytosol	40.46	40.35
CDY51847	Canola	cytosol	40.46	40.23
AT5G20550.1	Thale cress	cytosol	40.46	40.11
Solyc10g076840.1.1	Tomato	cytosol	40.17	40.06
AT5G54000.2	Thale cress	cytosol	40.17	39.83
VIT_09s0002g08090.t01	Wine grape	cytosol, nucleus, peroxisome	40.17	39.49
Solyc06g068270.2.1	Tomato	nucleus	40.46	39.44
CDY71604	Canola	cytosol	39.6	39.26
Bra006559.1-P	Field mustard	cytosol	39.6	39.14
VIT_11s0118g00390.t01	Wine grape	cytosol, nucleus, peroxisome	39.88	38.76
Solyc07g045040.2.1	Tomato	cytosol	39.31	38.64
AT1G49390.1	Thale cress	cytosol	38.73	38.51
KRH51466	Soybean	peroxisome	35.84	38.15
VIT_11s0118g00370.t01	Wine grape	plastid	34.68	37.27
KRH23597	Soybean	cytosol, peroxisome	34.68	35.29
TraesCS3B01G497900.1	Wheat	cytosol	37.57	35.04
TraesCS4B01G374300.1	Wheat	cytosol	34.1	33.81
TraesCS4B01G374200.1	Wheat	cytosol	33.53	33.33
TraesCS2B01G077500.1	Wheat	cytoskeleton, cytosol, peroxisome	34.1	32.51
TraesCS1B01G234500.1	Wheat	plastid	24.57	32.2
TraesCS2B01G077600.1	Wheat	cytosol	34.1	32.07
TraesCS2B01G077800.1	Wheat	cytosol	33.81	31.97
TraesCS3B01G440500.1	Wheat	cytosol	32.95	30.89
TraesCS3B01G592000.1	Wheat	cytosol	33.53	30.61
TraesCS4B01G335300.2	Wheat	cytosol	31.79	30.3
PGSC0003DMT400044918	Potato	cytosol	19.94	30.0
TraesCS4B01G374100.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	32.95	28.36
TraesCS5B01G466400.1	Wheat	cytosol	28.61	27.97
TraesCS1B01G345200.1	Wheat	cytosol	28.61	27.5
TraesCS3B01G520100.3	Wheat	cytosol	29.19	26.03

Protein Annotations

EnsemblPlants:TraesCS1B01G332300.1	EnsemblPlantsGene:TraesCS1B01G332300	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF373	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SEG:seg	SUPFAM:SSF51197	MapMan:50.1.13	:	:

Description

No Description!

Coordinates

chr1B:+:558495647..558497266

Molecular Weight (calculated)

39191.9 Da

IEP (calculated)

6.014

GRAVY (calculated)

-0.343

Length

346 amino acids

Sequence
(BLAST)

001: MTVQELAGAL GTPDVPAQYI VRAHQDQQLA AAVVAPVPVI DLGRLLKHCD GTSDEAAKLR SAIESWGLFM VSNHGVDAVM DDMMAASREF FRQPLEAKQR
101: YTNLISGERF QFEGYGNDRV SSPDQILDWT DRLYLKVEPE DERHVALWPA HPKTFRDALH EFTKKCGGVK DDLLRAMAKL LQLDDDDYFV KHFGERPLTN
201: ARCSYYPECP RPELVFGLKP HSDGTVVTVL MVDDRVGGLQ VLKDRVWWDV PIVPHTLLMI IGDQTEIMSN GVFRSPVHRV VTNTKKERLS VALDYSVDPE
301: KEIEPSAQLI NEKRSALYTK VKVKDYFARN YNDFTQGKMA IDTVKV

Best Arabidopsis Sequence Match ( AT1G49390.1 )
(BLAST)

001: MEKPKFKTVQ EVVAAGQGLP ERYLHAPTGE GESQPLNGAV PEMDIPAIDL SLLFSSSVDG QEEMKKLHSA LSTWGVVQVM NHGITEAFLD KIYKLTKQFF
101: ALPTEEKHKC ARETGNIQGY GNDMILSDNQ VLDWIDRLFL TTYPEDKRQL KFWPQVPVGF SETLDEYTMK QRVLIEKFFK AMARSLELEE NCFLEMYGEN
201: AVMNSRFNFF PPCPRPDKVI GIKPHADGSA ITLLLPDKDV EGLQFLKDGK WYKAPIVPDT ILITLGDQME IMSNGIYKSP VHRVVTNREK ERISVATFCV
301: PGLDKEIHPA DGLVTEARPR LYKTVTKYVD LHYKYYQQGR RTIEAALI

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9XIA5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.