Factsheet for TraesCS6B01G412700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G359300.1	Wheat	cytosol	96.9	96.9
TraesCS6D01G359600.1	Wheat	cytosol	45.63	95.86
TraesCSU01G115000.1	Wheat	cytosol	90.99	93.35
HORVU6Hr1G088440.1	Barley	cytosol	93.24	92.98
HORVU6Hr1G088420.2	Barley	cytosol, peroxisome	91.55	91.04
TraesCS6A01G375100.1	Wheat	plastid	76.9	79.59
TraesCS6B01G412800.1	Wheat	cytosol	75.21	75.0
TraesCS7B01G042100.2	Wheat	cytosol	65.63	65.63
TraesCS7B01G042000.1	Wheat	cytosol	47.61	64.5
TraesCS7B01G042300.1	Wheat	cytosol	63.38	63.2
EER88660	Sorghum	cytosol	58.31	56.4
TraesCS6B01G351600.1	Wheat	cytosol	48.17	51.66
TraesCS5B01G224800.1	Wheat	cytosol, nucleus, peroxisome	44.51	50.8
TraesCS7B01G042500.1	Wheat	cytosol	50.42	49.31
TraesCS5B01G224900.1	Wheat	cytosol	48.45	48.31
TraesCS7B01G042400.2	Wheat	cytosol	47.32	47.32
Bra002299.1-P	Field mustard	cytosol	20.28	47.06
TraesCS1B01G332300.1	Wheat	cytosol	44.23	45.38
Bra022690.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	28.73	45.33
CDY28799	Canola	cytoskeleton, cytosol, peroxisome	28.73	45.33
TraesCS1B01G332200.1	Wheat	cytosol	44.23	44.35
TraesCS7B01G041900.1	Wheat	cytosol	44.51	44.26
TraesCS6B01G145400.1	Wheat	cytosol	42.25	43.1
VIT_11s0118g00400.t01	Wine grape	peroxisome	32.96	42.7
VIT_11s0118g00370.t01	Wine grape	plastid	38.59	42.55
KRH03607	Soybean	cytosol, peroxisome, plastid	41.69	42.17
CDY56860	Canola	cytosol	41.13	42.07
CDY51847	Canola	cytosol	41.13	41.95
Bra002298.1-P	Field mustard	cytosol	41.13	41.95
TraesCS5B01G282100.1	Wheat	golgi	43.38	41.85
CDX92465	Canola	cytosol	41.13	41.83
Bra006559.1-P	Field mustard	cytosol	41.13	41.71
PGSC0003DMT400073345	Potato	cytosol	41.69	41.69
KRH60778	Soybean	cytosol, nucleus, peroxisome	41.69	41.57
VIT_11s0118g00390.t01	Wine grape	cytosol, nucleus, peroxisome	41.69	41.57
CDY71604	Canola	cytosol	40.85	41.55
TraesCS7B01G041600.1	Wheat	cytosol	43.66	41.44
AT5G20400.1	Thale cress	cytosol	40.56	41.38
PGSC0003DMT400049384	Potato	cytosol	32.68	41.28
AT5G20550.1	Thale cress	cytosol	40.28	40.97
VIT_09s0002g08090.t01	Wine grape	cytosol, nucleus, peroxisome	40.56	40.91
Solyc06g068270.2.1	Tomato	nucleus	40.56	40.56
AT1G49390.1	Thale cress	cytosol	39.72	40.52
Solyc07g045040.2.1	Tomato	cytosol	39.44	39.77
Solyc10g086780.1.1	Tomato	cytosol	34.65	39.68
PGSC0003DMT400049392	Potato	cytosol	38.31	39.19
CDY63243	Canola	mitochondrion	16.62	39.07
Solyc10g076840.1.1	Tomato	cytosol	38.03	38.9
KRH51466	Soybean	peroxisome	35.49	38.77
TraesCS7B01G042200.3	Wheat	peroxisome	39.44	38.25
VIT_11s0118g00360.t01	Wine grape	cytosol	42.82	38.19
AT5G54000.2	Thale cress	cytosol	36.9	37.54
TraesCS3B01G497900.1	Wheat	cytosol	37.46	35.85
KRH23597	Soybean	cytosol, peroxisome	33.8	35.29
PGSC0003DMT400044918	Potato	cytosol	22.25	34.35
TraesCS3B01G440500.1	Wheat	cytosol	33.52	32.25
TraesCS1B01G234500.1	Wheat	plastid	23.1	31.06
TraesCS2B01G077800.1	Wheat	cytosol	30.42	29.51
TraesCS2B01G077600.1	Wheat	cytosol	30.42	29.35
TraesCS4B01G374200.1	Wheat	cytosol	28.73	29.31
TraesCS2B01G077500.1	Wheat	cytoskeleton, cytosol, peroxisome	29.86	29.2
TraesCS4B01G374300.1	Wheat	cytosol	28.45	28.94
TraesCS4B01G335300.2	Wheat	cytosol	29.01	28.37
TraesCS3B01G592000.1	Wheat	cytosol	29.58	27.7
TraesCS5B01G466400.1	Wheat	cytosol	27.61	27.68
TraesCS1B01G345200.1	Wheat	cytosol	25.92	25.56
TraesCS3B01G520100.3	Wheat	cytosol	27.32	25.0
TraesCS4B01G374100.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	27.61	24.38

Protein Annotations

EnsemblPlants:TraesCS6B01G412700.1	EnsemblPlantsGene:TraesCS6B01G412700	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF114	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SEG:seg	SUPFAM:SSF51197	MapMan:50.1.13	:	:

Description

No Description!

Coordinates

chr6B:-:686191986..686193613

Molecular Weight (calculated)

40121.2 Da

IEP (calculated)

4.541

GRAVY (calculated)

-0.199

Length

355 amino acids

Sequence
(BLAST)

001: MASYDQQFKV LEVPPIVQEL VGAGVQEPPS QYVLPEQDRP AAAVTEMPEP IPIIDLSRLS AGSAEEFDKL RSALENWDLF LAVGHGMEPS FLAEAMKVTR
101: EFFNLPLEEK QKYSNIVDGE KLGMDGYGND MVVKENQVLD WNDRLNLLVE PESLRTYRLW PTQPPSFRDI LSEYTVKCKA AANLVFRNMA KILNLQEEHL
201: VNMIGENSIT QAIFNYYPQC PRPDHVLGLK AHTDGSIITV NFADAEGLQL QKNGIWYNVP IVPNALVMNV GDIMEILSNG FFKSLVHRVV TNAEKERLSL
301: VLVYTLELET ELAPVSELVD DKRPARYMKI KLNDYMEKYH DTYATGTLAI DGVKI

Best Arabidopsis Sequence Match ( AT1G49390.1 )
(BLAST)

001: MEKPKFKTVQ EVVAAGQGLP ERYLHAPTGE GESQPLNGAV PEMDIPAIDL SLLFSSSVDG QEEMKKLHSA LSTWGVVQVM NHGITEAFLD KIYKLTKQFF
101: ALPTEEKHKC ARETGNIQGY GNDMILSDNQ VLDWIDRLFL TTYPEDKRQL KFWPQVPVGF SETLDEYTMK QRVLIEKFFK AMARSLELEE NCFLEMYGEN
201: AVMNSRFNFF PPCPRPDKVI GIKPHADGSA ITLLLPDKDV EGLQFLKDGK WYKAPIVPDT ILITLGDQME IMSNGIYKSP VHRVVTNREK ERISVATFCV
301: PGLDKEIHPA DGLVTEARPR LYKTVTKYVD LHYKYYQQGR RTIEAALI

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9XIA5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.