Factsheet for TraesCSU01G115000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G359600.1	Wheat	cytosol	45.66	93.49
TraesCS6B01G412700.1	Wheat	cytosol	93.35	90.99
TraesCS6D01G359300.1	Wheat	cytosol	92.2	89.86
HORVU6Hr1G088440.1	Barley	cytosol	90.46	87.92
HORVU6Hr1G088420.2	Barley	cytosol, peroxisome	88.73	85.99
TraesCS6A01G375100.1	Wheat	plastid	76.88	77.55
EER88660	Sorghum	cytosol	56.07	52.86
Bra002299.1-P	Field mustard	cytosol	20.23	45.75
Bra022690.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	29.48	45.33
CDY28799	Canola	cytoskeleton, cytosol, peroxisome	29.48	45.33
TraesCSU01G102900.1	Wheat	cytosol	43.64	42.54
VIT_11s0118g00400.t01	Wine grape	peroxisome	32.66	41.24
PGSC0003DMT400049384	Potato	cytosol	33.24	40.93
KRH03607	Soybean	cytosol, peroxisome, plastid	41.33	40.74
CDY71604	Canola	cytosol	41.04	40.69
VIT_11s0118g00370.t01	Wine grape	plastid	37.86	40.68
CDY56860	Canola	cytosol	40.75	40.63
Bra002298.1-P	Field mustard	cytosol	40.75	40.52
KRH60778	Soybean	cytosol, nucleus, peroxisome	41.62	40.45
CDX92465	Canola	cytosol	40.75	40.4
Solyc10g086780.1.1	Tomato	cytosol	36.13	40.32
Bra006559.1-P	Field mustard	cytosol	40.75	40.29
CDY51847	Canola	cytosol	40.46	40.23
VIT_11s0118g00390.t01	Wine grape	cytosol, nucleus, peroxisome	41.04	39.89
PGSC0003DMT400073345	Potato	cytosol	40.75	39.72
AT1G49390.1	Thale cress	cytosol	39.88	39.66
PGSC0003DMT400049392	Potato	cytosol	39.6	39.48
AT5G20400.1	Thale cress	cytosol	39.6	39.37
AT5G20550.1	Thale cress	cytosol	39.31	38.97
Solyc10g076840.1.1	Tomato	cytosol	39.02	38.9
Solyc07g045040.2.1	Tomato	cytosol	39.31	38.64
VIT_09s0002g08090.t01	Wine grape	cytosol, nucleus, peroxisome	39.31	38.64
Solyc06g068270.2.1	Tomato	nucleus	39.6	38.59
CDY63243	Canola	mitochondrion	16.76	38.41
KRH51466	Soybean	peroxisome	35.26	37.54
VIT_11s0118g00360.t01	Wine grape	cytosol	41.91	36.43
AT5G54000.2	Thale cress	cytosol	36.71	36.39
KRH23597	Soybean	cytosol, peroxisome	32.37	32.94
PGSC0003DMT400044918	Potato	cytosol	21.39	32.17
TraesCSU01G044600.1	Wheat	mitochondrion	18.21	30.58
TraesCSU01G175100.1	Wheat	cytosol	26.59	28.4

Protein Annotations

EnsemblPlants:TraesCSU01G115000.1	EnsemblPlantsGene:TraesCSU01G115000	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF114	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SUPFAM:SSF51197	MapMan:50.1.13	:	:	:

Description

No Description!

Coordinates

chrUn:+:99816837..99818651

Molecular Weight (calculated)

39271.3 Da

IEP (calculated)

4.694

GRAVY (calculated)

-0.232

Length

346 amino acids

Sequence
(BLAST)

001: MASYDQQFKV LEVPPIVQEP PSQYVLPEQD RPAEMPEPIP IIDLSRLSAG SAEELDKLRS ALEILAVGHV HGMEPSFLAQ AMKVTREFFN LPLEEKHKYS
101: NIVDGEKLGM DGYGNDMVVK ENQVLDWNDR LNLLVEVEPE SLRTYRLWPT QPPSFRDILS EYTVRCKAAA NLVFRNMAKI LNLQEEEHLV NMIGDNSITQ
201: AIFNYYPQCP KPDHVLGLKA HTDGSIITVN FADAHAEGLQ LLKNGVWYNV PIVPNALVMN IGDIMEILSN GFFKSLVHRV VTNAEKERLS LVLVYSLDLE
301: TELEPVSEMV DDKRPARYMK IKLNDYMEKY HDTYATGTLA IEGVKI

Best Arabidopsis Sequence Match ( AT1G49390.1 )
(BLAST)

001: MEKPKFKTVQ EVVAAGQGLP ERYLHAPTGE GESQPLNGAV PEMDIPAIDL SLLFSSSVDG QEEMKKLHSA LSTWGVVQVM NHGITEAFLD KIYKLTKQFF
101: ALPTEEKHKC ARETGNIQGY GNDMILSDNQ VLDWIDRLFL TTYPEDKRQL KFWPQVPVGF SETLDEYTMK QRVLIEKFFK AMARSLELEE NCFLEMYGEN
201: AVMNSRFNFF PPCPRPDKVI GIKPHADGSA ITLLLPDKDV EGLQFLKDGK WYKAPIVPDT ILITLGDQME IMSNGIYKSP VHRVVTNREK ERISVATFCV
301: PGLDKEIHPA DGLVTEARPR LYKTVTKYVD LHYKYYQQGR RTIEAALI

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9XIA5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.