Factsheet for TraesCSU01G102900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G439800.1	Wheat	cytosol	91.27	91.01
TraesCS7A01G051800.1	Wheat	cytosol	90.99	90.99
HORVU7Hr1G009310.3	Barley	cytosol	86.2	88.18
Zm00001d045145_P001	Maize	peroxisome	59.72	59.38
EER87956	Sorghum	peroxisome	60.28	58.95
Bra002299.1-P	Field mustard	cytosol	21.41	49.67
Bra022690.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	29.01	45.78
CDY28799	Canola	cytoskeleton, cytosol, peroxisome	29.01	45.78
VIT_11s0118g00400.t01	Wine grape	peroxisome	34.37	44.53
PGSC0003DMT400049384	Potato	cytosol	35.21	44.48
CDY63243	Canola	mitochondrion	18.59	43.71
TraesCSU01G115000.1	Wheat	cytosol	42.54	43.64
KRH60778	Soybean	cytosol, nucleus, peroxisome	43.38	43.26
Solyc10g086780.1.1	Tomato	cytosol	37.75	43.23
PGSC0003DMT400049392	Potato	cytosol	41.97	42.94
Bra002298.1-P	Field mustard	cytosol	41.69	42.53
KRH03607	Soybean	cytosol, peroxisome, plastid	41.97	42.45
CDX92465	Canola	cytosol	41.69	42.41
CDY56860	Canola	cytosol	40.85	41.79
Solyc10g076840.1.1	Tomato	cytosol	40.28	41.21
PGSC0003DMT400073345	Potato	cytosol	41.13	41.13
VIT_11s0118g00360.t01	Wine grape	cytosol	45.92	40.95
AT5G20400.1	Thale cress	cytosol	40.0	40.8
AT5G20550.1	Thale cress	cytosol	39.44	40.11
Solyc07g045040.2.1	Tomato	cytosol	39.72	40.06
Solyc06g068270.2.1	Tomato	nucleus	40.0	40.0
VIT_09s0002g08090.t01	Wine grape	cytosol, nucleus, peroxisome	39.44	39.77
CDY51847	Canola	cytosol	38.59	39.37
VIT_11s0118g00390.t01	Wine grape	cytosol, nucleus, peroxisome	39.15	39.04
AT1G49390.1	Thale cress	cytosol	38.03	38.79
Bra006559.1-P	Field mustard	cytosol	38.03	38.57
AT5G54000.2	Thale cress	cytosol	37.75	38.4
CDY71604	Canola	cytosol	37.75	38.4
VIT_11s0118g00370.t01	Wine grape	plastid	34.65	38.2
KRH51466	Soybean	peroxisome	33.24	36.31
KRH23597	Soybean	cytosol, peroxisome	34.65	36.18
PGSC0003DMT400044918	Potato	cytosol	19.72	30.43
TraesCSU01G175100.1	Wheat	cytosol	27.32	29.94
TraesCSU01G044600.1	Wheat	mitochondrion	16.9	29.13

Protein Annotations

EnsemblPlants:TraesCSU01G102900.1	EnsemblPlantsGene:TraesCSU01G102900	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF373	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SEG:seg	SUPFAM:SSF51197	MapMan:50.1.13	:	:

Description

No Description!

Coordinates

chrUn:-:90116977..90118741

Molecular Weight (calculated)

40151.0 Da

IEP (calculated)

6.294

GRAVY (calculated)

-0.358

Length

355 amino acids

Sequence
(BLAST)

001: MGSTGAARAM PVQELAGALG TPDVPAPYVV RTHKDQQLAA AVVAPVPVID HGRLLRKDHS ADETAKLRSA IESWGLFMVS NHGVDAAVIE SMRAASREFF
101: RQPLEEKQRY SNLICDEQFQ SEGYGNDRVS SPDQTRDWTD RLYLKVQPED ERRIALWPAH PENFRDVLHQ FTKKCGQLKN DLLRAMAKLV GLDDENYFVD
201: QLGEKALTNA RCSYYPECPR PELVFGLKPH TDGTVVTVLM VDDHVGGLQV LRDGVWWDVP IVPHTLLILI GDQIEIMSNG IFKSPVHRVI TNAKKERLSV
301: ALDYSVDPER EIEPSPQLID EKRPAFYRKV KVKDYIATYY NHFFQGGMVI DTIKL

Best Arabidopsis Sequence Match ( AT1G49390.1 )
(BLAST)

001: MEKPKFKTVQ EVVAAGQGLP ERYLHAPTGE GESQPLNGAV PEMDIPAIDL SLLFSSSVDG QEEMKKLHSA LSTWGVVQVM NHGITEAFLD KIYKLTKQFF
101: ALPTEEKHKC ARETGNIQGY GNDMILSDNQ VLDWIDRLFL TTYPEDKRQL KFWPQVPVGF SETLDEYTMK QRVLIEKFFK AMARSLELEE NCFLEMYGEN
201: AVMNSRFNFF PPCPRPDKVI GIKPHADGSA ITLLLPDKDV EGLQFLKDGK WYKAPIVPDT ILITLGDQME IMSNGIYKSP VHRVVTNREK ERISVATFCV
301: PGLDKEIHPA DGLVTEARPR LYKTVTKYVD LHYKYYQQGR RTIEAALI

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9XIA5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.