Factsheet for AT5G20550.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G20400.1	Thale cress	cytosol	83.67	83.91
CDY51847	Canola	cytosol	78.22	78.45
AT1G49390.1	Thale cress	cytosol	77.65	77.87
Bra006559.1-P	Field mustard	cytosol	77.08	76.86
CDY71604	Canola	cytosol	76.5	76.5
AT5G54000.2	Thale cress	cytosol	73.07	73.07
PGSC0003DMT400049384	Potato	cytosol	44.7	55.52
Solyc10g086780.1.1	Tomato	cytosol	46.99	52.9
PGSC0003DMT400049392	Potato	cytosol	52.44	52.74
Solyc10g076840.1.1	Tomato	cytosol	51.29	51.59
TraesCS7D01G046300.1	Wheat	cytosol	18.05	48.46
VIT_11s0118g00360.t01	Wine grape	cytosol	54.44	47.74
TraesCS7D01G046400.1	Wheat	cytosol	22.35	45.88
TraesCS7B01G042000.1	Wheat	cytosol	33.24	44.27
TraesCS1D01G319800.1	Wheat	cytosol	24.07	43.52
HORVU7Hr1G009200.1	Barley	cytosol, peroxisome	23.21	43.32
OQU75951	Sorghum	cytosol	42.69	43.06
HORVU7Hr1G009310.3	Barley	cytosol	42.41	42.65
TraesCS6D01G359600.1	Wheat	cytosol	20.63	42.6
TraesCS5B01G224800.1	Wheat	cytosol, nucleus, peroxisome	37.82	42.44
TraesCS7A01G140600.1	Wheat	cytosol	28.65	42.37
HORVU7Hr1G028840.5	Barley	cytosol	42.69	41.97
TraesCS7B01G042100.2	Wheat	cytosol	42.69	41.97
TraesCS7D01G142300.1	Wheat	cytosol	42.69	41.97
HORVU1Hr1G066370.1	Barley	cytosol, peroxisome	39.54	41.69
TraesCS7B01G042400.2	Wheat	cytosol	42.41	41.69
TraesCS7A01G141100.1	Wheat	cytosol	43.84	41.69
EER87956	Sorghum	peroxisome	43.27	41.6
HORVU5Hr1G075760.1	Barley	cytosol	43.84	41.58
KXG29110	Sorghum	cytosol	43.27	41.48
Zm00001d045141_P001	Maize	cytosol	33.24	41.43
Zm00001d030548_P001	Maize	extracellular	41.83	41.36
TraesCS7A01G140300.2	Wheat	cytosol	42.69	41.27
TraesCS1B01G332200.1	Wheat	cytosol	41.83	41.24
TraesCS5A01G283100.2	Wheat	cytosol	42.12	41.18
Os02t0320800-01	Rice	cytosol, peroxisome	35.53	41.06
TraesCS5D01G290600.1	Wheat	cytosol	43.27	41.03
HORVU7Hr1G009140.4	Barley	cytosol, peroxisome	42.12	40.95
TraesCS7D01G141600.1	Wheat	cytosol, mitochondrion, peroxisome	41.83	40.9
TraesCS7D01G142000.2	Wheat	cytosol	41.55	40.85
TraesCS6D01G138200.1	Wheat	cytosol	42.98	40.76
Os02t0280700-01	Rice	cytosol	40.97	40.74
TraesCS4A01G439800.1	Wheat	cytosol	41.55	40.73
TraesCS7A01G140900.1	Wheat	cytosol	41.55	40.62
TraesCS7A01G051800.1	Wheat	cytosol	41.26	40.56
TraesCS7A01G140500.1	Wheat	cytosol	28.94	40.56
TraesCS7A01G140200.1	Wheat	cytosol	38.68	40.54
TraesCS5B01G282100.1	Wheat	golgi	42.69	40.49
TraesCS5D01G289800.1	Wheat	cytosol, mitochondrion	42.69	40.49
TraesCS1B01G332300.1	Wheat	cytosol	40.11	40.46
TraesCS1A01G320000.1	Wheat	cytosol	40.97	40.4
HORVU7Hr1G028850.1	Barley	cytosol	41.26	40.34
HORVU7Hr1G028870.3	Barley	cytosol	41.26	40.34
TraesCS7B01G041900.1	Wheat	cytosol	41.26	40.34
TraesCS7D01G141900.1	Wheat	cytosol	41.26	40.34
TraesCS6B01G412700.1	Wheat	cytosol	40.97	40.28
TraesCS5A01G282700.1	Wheat	golgi	42.41	40.22
TraesCS5A01G282800.1	Wheat	cytosol	39.54	40.12
Zm00001d045145_P001	Maize	peroxisome	40.97	40.06
TraesCS7A01G051200.1	Wheat	cytosol	40.69	39.89
TraesCS7B01G042300.1	Wheat	cytosol	40.69	39.89
TraesCS5D01G565100.1	Wheat	cytosol	38.11	39.82
TraesCS1D01G319700.1	Wheat	cytosol	41.26	39.78
TraesCS7A01G141000.1	Wheat	cytosol	40.69	39.78
TraesCS7D01G142200.1	Wheat	cytosol	40.69	39.78
EER87960	Sorghum	cytosol	20.06	39.77
TraesCS6D01G359300.1	Wheat	cytosol	40.4	39.72
Os06t0176700-01	Rice	cytosol	39.83	39.71
Os06t0178500-01	Rice	cytosol	39.83	39.71
TraesCS4A01G320100.1	Wheat	cytosol	37.82	39.52
EER88660	Sorghum	cytosol	41.55	39.51
HORVU6Hr1G078640.9	Barley	cytosol, peroxisome	38.11	39.47
TraesCSU01G102900.1	Wheat	cytosol	40.11	39.44
TraesCSU01G115000.1	Wheat	cytosol	38.97	39.31
TraesCS6A01G148800.2	Wheat	cytosol	41.55	39.3
EER89306	Sorghum	cytosol	40.4	39.28
TraesCS7D01G050500.1	Wheat	cytosol	39.83	39.15
TraesCS4A01G496600.1	Wheat	cytosol	37.82	39.05
TraesCS7D01G046100.1	Wheat	cytosol	39.83	39.04
TraesCS6A01G320700.1	Wheat	cytosol	36.96	38.97
TraesCS5D01G290400.1	Wheat	cytosol	41.83	38.83
TraesCS7A01G001400.1	Wheat	cytosol	36.68	38.79
HORVU7Hr1G010150.1	Barley	cytosol, endoplasmic reticulum, peroxisome	39.54	38.76
TraesCS4A01G438300.1	Wheat	cytosol	39.54	38.76
TraesCS6B01G351600.1	Wheat	cytosol	36.68	38.67
HORVU7Hr1G028880.10	Barley	plastid	42.98	38.66
TraesCS5D01G233600.1	Wheat	cytosol, nucleus, peroxisome	38.97	38.64
TraesCS4A01G442500.1	Wheat	cytosol	39.26	38.59
TraesCS7A01G055900.1	Wheat	cytosol	39.26	38.59
TraesCS5D01G233700.1	Wheat	cytosol	39.26	38.48
HORVU6Hr1G088420.2	Barley	cytosol, peroxisome	39.26	38.38
HORVU6Hr1G088440.1	Barley	cytosol	38.97	38.2
TraesCS6D01G359700.1	Wheat	cytosol	38.97	38.2
TraesCS5A01G226400.1	Wheat	cytosol	39.54	38.12
Os06t0176300-00	Rice	cytosol	33.52	38.11
Os06t0177600-00	Rice	cytosol	33.52	38.11
TraesCS6A01G375200.1	Wheat	cytosol	38.97	38.1
Os06t0176500-00	Rice	cytosol	30.09	37.77
Os06t0177700-00	Rice	cytosol	30.09	37.77
TraesCS6D01G300600.1	Wheat	cytosol	35.82	37.76
TraesCS7B01G042500.1	Wheat	cytosol	39.26	37.74
HORVU7Hr1G021490.3	Barley	cytosol, peroxisome	34.1	37.66
TraesCS6D01G107100.1	Wheat	cytosol	37.54	37.64
TraesCS5B01G224900.1	Wheat	cytosol	38.4	37.64
TraesCS6B01G412800.1	Wheat	cytosol	38.4	37.64
HORVU6Hr1G088540.1	Barley	cytosol	38.4	37.53
Zm00001d037487_P001	Maize	cytosol	38.68	37.4
TraesCS5D01G007300.1	Wheat	cytosol	20.63	37.31
HORVU7Hr1G009320.1	Barley	cytosol	28.94	37.27
HORVU6Hr1G088470.1	Barley	cytosol	38.11	37.25
HORVU7Hr1G028710.2	Barley	cytosol	39.83	37.17
TraesCS7B01G041600.1	Wheat	cytosol	39.83	37.17
TraesCS7D01G142400.1	Wheat	cytosol	39.26	37.03
TraesCS6B01G145400.1	Wheat	cytosol	36.68	36.78
TraesCS5D01G233800.1	Wheat	cytosol	32.09	36.48
TraesCS5D01G007400.1	Wheat	cytosol	37.54	36.39
TraesCS7A01G140100.1	Wheat	cytosol	27.51	35.82
KXG19442	Sorghum	cytosol	37.82	35.77
TraesCS1A01G320100.1	Wheat	cytosol	41.55	35.71
TraesCS7B01G042200.3	Wheat	peroxisome	37.25	35.52
EER87955	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	39.54	35.38
TraesCS6A01G375100.1	Wheat	plastid	34.67	35.28
TraesCS7D01G142100.1	Wheat	cytosol, nucleus, peroxisome	42.12	34.67
HORVU5Hr1G124390.1	Barley	cytosol	30.09	34.65
AT1G17020.1	Thale cress	cytosol	35.24	34.36
AT3G21420.1	Thale cress	cytosol	35.82	34.34
AT4G25310.1	Thale cress	cytosol	34.67	34.28
AT1G78550.1	Thale cress	cytosol, nucleus, peroxisome	34.96	34.27
HORVU5Hr1G065620.7	Barley	plastid	34.67	32.97
AT4G25300.1	Thale cress	cytosol	32.95	32.3
AT1G17010.1	Thale cress	cytosol	32.09	31.02
HORVU0Hr1G019590.1	Barley	peroxisome	22.06	30.68
HORVU2Hr1G096500.1	Barley	cytosol	17.77	30.24
Os06t0178700-01	Rice	cytosol	9.74	9.6

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	EntrezGene:832177	ProteinID:AED92857.1	ArrayExpress:AT5G20550	EnsemblPlantsGene:AT5G20550
RefSeq:AT5G20550	TAIR:AT5G20550	RefSeq:AT5G20550-TAIR-G	EnsemblPlants:AT5G20550.1	TAIR:AT5G20550.1	EMBL:AY085103
Unigene:At.31170	EMBL:BT030332	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0051213	GO:GO:0055114
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	RefSeq:NP_197555.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	PO:PO:0009005	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF385	UniProt:Q8LF12
SUPFAM:SSF51197	UniParc:UPI0000048B81	SEG:seg	:	:	:

Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8LF12]

Coordinates

chr5:-:6952397..6953971

Molecular Weight (calculated)

39528.7 Da

IEP (calculated)

5.287

GRAVY (calculated)

-0.285

Length

349 amino acids

Sequence
(BLAST)

001: MEKPKFKTVQ EVVAAGEGIP ERYLQPPAVD DNGQHLNAAV PVMDIPAIDL SLLLSPSDDG REELSKLHSA LSTWGVVQVI NHGITKALLD KIYKLTKEFC
101: ALPSEEKQKY AREIGSIQGY GNDMILWDDQ VLDWIDRLYI TTYPEDQRQL KFWPDVPVGF RETLHEYTMK QHLVFNQVFK AMAISLELEE NCFLDMCGEN
201: ATMDTRFNMY PPCPRPDKVI GVRPHADKSA FTLLLPDKNV EGLQFLKDGK WYKAPVVASD TILINVGDQM EIMSNGIYKS PVHRVVTNTE KERISVATFC
301: IPGADKEIQP VDGLVSEARP RLYKPVKNYV DLLNKYYIQG QRPIAASLI

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.