Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- peroxisome 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G050500.1 | Wheat | cytosol | 94.93 | 94.93 |
| TraesCS7A01G055900.1 | Wheat | cytosol | 94.93 | 94.93 |
| HORVU7Hr1G010150.1 | Barley | cytosol, endoplasmic reticulum, peroxisome | 90.14 | 89.89 |
| TraesCS7A01G051800.1 | Wheat | cytosol | 75.49 | 75.49 |
| TraesCS4A01G439800.1 | Wheat | cytosol | 75.21 | 75.0 |
| TraesCS1A01G320000.1 | Wheat | cytosol | 72.68 | 72.88 |
| TraesCS4A01G438300.1 | Wheat | cytosol | 71.55 | 71.35 |
| TraesCS7A01G051200.1 | Wheat | cytosol | 70.42 | 70.22 |
| TraesCS7A01G140200.1 | Wheat | cytosol | 62.25 | 66.37 |
| TraesCS1A01G320100.1 | Wheat | cytosol | 75.21 | 65.76 |
| TraesCS7A01G140100.1 | Wheat | cytosol | 46.48 | 61.57 |
| Zm00001d045145_P001 | Maize | peroxisome | 58.87 | 58.54 |
| EER87956 | Sorghum | peroxisome | 57.75 | 56.47 |
| TraesCS7A01G140600.1 | Wheat | cytosol | 35.77 | 53.81 |
| TraesCS7A01G141100.1 | Wheat | cytosol | 53.52 | 51.77 |
| TraesCS6A01G320700.1 | Wheat | cytosol | 48.17 | 51.66 |
| TraesCS4A01G320100.1 | Wheat | cytosol | 47.89 | 50.9 |
| TraesCS7A01G001400.1 | Wheat | cytosol | 47.04 | 50.61 |
| TraesCS4A01G496600.1 | Wheat | cytosol | 47.89 | 50.3 |
| TraesCS7A01G140900.1 | Wheat | cytosol | 50.42 | 50.14 |
| TraesCS7A01G140300.2 | Wheat | cytosol | 49.86 | 49.03 |
| TraesCS5A01G226400.1 | Wheat | cytosol | 49.01 | 48.07 |
| CDY28799 | Canola | cytoskeleton, cytosol, peroxisome | 29.86 | 47.11 |
| Bra022690.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 29.86 | 47.11 |
| Bra002299.1-P | Field mustard | cytosol | 20.28 | 47.06 |
| TraesCS7A01G141000.1 | Wheat | cytosol | 46.2 | 45.94 |
| TraesCS7A01G140500.1 | Wheat | cytosol | 32.11 | 45.78 |
| TraesCS6A01G375200.1 | Wheat | cytosol | 44.51 | 44.26 |
| VIT_11s0118g00400.t01 | Wine grape | peroxisome | 33.52 | 43.43 |
| Solyc10g086780.1.1 | Tomato | cytosol | 36.62 | 41.94 |
| PGSC0003DMT400049384 | Potato | cytosol | 32.96 | 41.64 |
| KRH60778 | Soybean | cytosol, nucleus, peroxisome | 41.69 | 41.57 |
| PGSC0003DMT400049392 | Potato | cytosol | 40.28 | 41.21 |
| KRH03607 | Soybean | cytosol, peroxisome, plastid | 40.56 | 41.03 |
| PGSC0003DMT400073345 | Potato | cytosol | 40.85 | 40.85 |
| AT5G20400.1 | Thale cress | cytosol | 39.72 | 40.52 |
| Bra002298.1-P | Field mustard | cytosol | 39.72 | 40.52 |
| CDX92465 | Canola | cytosol | 39.72 | 40.4 |
| CDY56860 | Canola | cytosol | 39.44 | 40.35 |
| TraesCS5A01G283100.2 | Wheat | cytosol | 40.56 | 40.34 |
| AT1G49390.1 | Thale cress | cytosol | 39.44 | 40.23 |
| VIT_09s0002g08090.t01 | Wine grape | cytosol, nucleus, peroxisome | 39.72 | 40.06 |
| Solyc06g068270.2.1 | Tomato | nucleus | 40.0 | 40.0 |
| TraesCS5A01G282700.1 | Wheat | golgi | 41.13 | 39.67 |
| VIT_11s0118g00360.t01 | Wine grape | cytosol | 44.23 | 39.45 |
| CDY51847 | Canola | cytosol | 38.59 | 39.37 |
| AT5G20550.1 | Thale cress | cytosol | 38.59 | 39.26 |
| AT5G54000.2 | Thale cress | cytosol | 38.59 | 39.26 |
| TraesCS6A01G375100.1 | Wheat | plastid | 37.75 | 39.07 |
| Solyc10g076840.1.1 | Tomato | cytosol | 38.03 | 38.9 |
| TraesCS5A01G282800.1 | Wheat | cytosol | 37.46 | 38.66 |
| Bra006559.1-P | Field mustard | cytosol | 38.03 | 38.57 |
| CDY63243 | Canola | mitochondrion | 16.34 | 38.41 |
| CDY71604 | Canola | cytosol | 37.75 | 38.4 |
| VIT_11s0118g00390.t01 | Wine grape | cytosol, nucleus, peroxisome | 38.03 | 37.92 |
| Solyc07g045040.2.1 | Tomato | cytosol | 37.18 | 37.5 |
| TraesCS6A01G148800.2 | Wheat | cytosol | 38.87 | 37.4 |
| KRH23597 | Soybean | cytosol, peroxisome | 35.77 | 37.35 |
| VIT_11s0118g00370.t01 | Wine grape | plastid | 33.24 | 36.65 |
| KRH51466 | Soybean | peroxisome | 33.24 | 36.31 |
| TraesCS3A01G457700.1 | Wheat | cytosol | 35.49 | 34.05 |
| TraesCS2A01G065600.1 | Wheat | cytoskeleton, cytosol, peroxisome | 34.37 | 33.33 |
| TraesCS3A01G407900.1 | Wheat | cytosol | 34.37 | 33.15 |
| TraesCS2A01G065300.1 | Wheat | cytosol | 33.8 | 32.61 |
| TraesCS2A01G065800.1 | Wheat | cytosol | 33.52 | 32.51 |
| TraesCS1A01G221200.1 | Wheat | cytosol | 32.39 | 32.49 |
| TraesCS2A01G065400.1 | Wheat | cytosol | 33.52 | 32.34 |
| TraesCS3A01G407800.1 | Wheat | cytosol | 33.24 | 31.98 |
| TraesCS2A01G065500.1 | Wheat | cytosol | 32.96 | 31.88 |
| TraesCS5A01G539900.1 | Wheat | cytosol | 28.17 | 31.45 |
| TraesCS5A01G539700.2 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 29.01 | 29.94 |
| TraesCS5A01G539800.1 | Wheat | cytosol | 29.3 | 29.89 |
| TraesCS3A01G524700.1 | Wheat | cytosol | 29.01 | 29.34 |
| TraesCS3A01G477000.2 | Wheat | cytosol | 29.01 | 29.26 |
| PGSC0003DMT400044918 | Potato | cytosol | 18.87 | 29.13 |
| TraesCS5A01G457300.1 | Wheat | cytosol | 27.89 | 28.53 |
| TraesCS1A01G331300.1 | Wheat | cytosol | 28.17 | 28.33 |
| TraesCS1A01G331400.1 | Wheat | cytosol, peroxisome, plastid | 28.73 | 26.29 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G442500.1 | EnsemblPlantsGene:TraesCS4A01G442500 | Gene3D:2.60.120.330 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF373 | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | SEG:seg | SUPFAM:SSF51197 | MapMan:50.1.13 | : | : |
Description
No Description!
Coordinates
chr4A:-:710412282..710413928
Molecular Weight (calculated)
39959.0 Da
IEP (calculated)
5.288
GRAVY (calculated)
-0.286
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MENFCVQKLA GALGTPDVPT RYVVRGHQKQ QLASTVVAPV PVINLGLLSK QDGGAADEAA KLRSAIDSWG LFLISNHGVD AAVMDGMMAA CREFFRQPLE
101: EKQRQSSLIG DDQYEGYGNY EGYGNDQVSS PDQTLDWTDR LYLKVEPEDE RRIALWPAHP ESFRDVLHEF TKKCGVVKDD LLRAMAKLLE LDDNDYFVNQ
201: LAEKPFTNAR CSYYPVCPRP ELVFGLTPHS DGTVVAILMV DDSVGGLQVL RDGVWWDVPI VPHTLLMIMG DQMEIMSNGI FKSPVHRVMT NAKKERISVV
301: LDYSVDPEKE IEPSAQLVNE KRPALYRKVK VKDYIVAHYT HFSQGKEVVM EKLKI
101: EKQRQSSLIG DDQYEGYGNY EGYGNDQVSS PDQTLDWTDR LYLKVEPEDE RRIALWPAHP ESFRDVLHEF TKKCGVVKDD LLRAMAKLLE LDDNDYFVNQ
201: LAEKPFTNAR CSYYPVCPRP ELVFGLTPHS DGTVVAILMV DDSVGGLQVL RDGVWWDVPI VPHTLLMIMG DQMEIMSNGI FKSPVHRVMT NAKKERISVV
301: LDYSVDPEKE IEPSAQLVNE KRPALYRKVK VKDYIVAHYT HFSQGKEVVM EKLKI
001: MEKPKFKTVQ EVVAAGQGLP ERYLHAPTGE GESQPLNGAV PEMDIPAIDL SLLFSSSVDG QEEMKKLHSA LSTWGVVQVM NHGITEAFLD KIYKLTKQFF
101: ALPTEEKHKC ARETGNIQGY GNDMILSDNQ VLDWIDRLFL TTYPEDKRQL KFWPQVPVGF SETLDEYTMK QRVLIEKFFK AMARSLELEE NCFLEMYGEN
201: AVMNSRFNFF PPCPRPDKVI GIKPHADGSA ITLLLPDKDV EGLQFLKDGK WYKAPIVPDT ILITLGDQME IMSNGIYKSP VHRVVTNREK ERISVATFCV
301: PGLDKEIHPA DGLVTEARPR LYKTVTKYVD LHYKYYQQGR RTIEAALI
101: ALPTEEKHKC ARETGNIQGY GNDMILSDNQ VLDWIDRLFL TTYPEDKRQL KFWPQVPVGF SETLDEYTMK QRVLIEKFFK AMARSLELEE NCFLEMYGEN
201: AVMNSRFNFF PPCPRPDKVI GIKPHADGSA ITLLLPDKDV EGLQFLKDGK WYKAPIVPDT ILITLGDQME IMSNGIYKSP VHRVVTNREK ERISVATFCV
301: PGLDKEIHPA DGLVTEARPR LYKTVTKYVD LHYKYYQQGR RTIEAALI
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9XIA5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.