Factsheet for TraesCS3A01G407900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G440500.1	Wheat	cytosol	87.5	87.26
TraesCS3A01G407800.1	Wheat	cytosol	87.23	86.99
HORVU3Hr1G091210.2	Barley	cytosol	85.6	84.68
TraesCSU01G175100.1	Wheat	cytosol	73.1	83.02
TraesCSU01G044600.1	Wheat	mitochondrion	42.66	76.21
Os03t0856000-01	Rice	cytosol	63.86	64.92
KXG37090	Sorghum	cytosol	62.77	63.81
EES08209	Sorghum	cytosol	63.32	63.66
KXG37089	Sorghum	cytosol	61.41	62.95
Zm00001d012819_P001	Maize	cytosol	61.96	62.64
TraesCS5A01G539800.1	Wheat	cytosol	47.55	50.29
VIT_02s0012g00320.t01	Wine grape	cytosol	37.23	50.18
TraesCS5A01G539700.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	46.47	49.71
TraesCS3A01G524700.1	Wheat	cytosol	46.74	49.0
VIT_02s0012g00390.t01	Wine grape	cytosol	46.74	48.73
VIT_02s0012g00450.t01	Wine grape	cytosol, nucleus, peroxisome	46.47	48.44
TraesCS5A01G539900.1	Wheat	cytosol	41.85	48.43
VIT_02s0012g00440.t01	Wine grape	extracellular	17.12	48.09
Bra010470.1-P	Field mustard	cytosol	34.51	47.57
VIT_02s0012g00360.t01	Wine grape	cytosol	42.93	47.02
VIT_02s0012g00400.t01	Wine grape	cytosol, peroxisome, plastid	44.02	46.82
Solyc02g071440.2.1	Tomato	cytosol	42.93	45.14
AT1G17020.1	Thale cress	cytosol	43.75	44.97
Bra026693.1-P	Field mustard	cytosol	43.75	44.97
TraesCS2A01G065800.1	Wheat	cytosol	44.57	44.81
Solyc02g071470.2.1	Tomato	cytosol	43.48	44.44
AT4G25300.1	Thale cress	cytosol	42.93	44.38
TraesCS1A01G221200.1	Wheat	cytosol	42.66	44.35
TraesCS2A01G065600.1	Wheat	cytoskeleton, cytosol, peroxisome	44.02	44.26
AT4G25310.1	Thale cress	cytosol	42.39	44.19
TraesCS2A01G065500.1	Wheat	cytosol	43.75	43.87
KRH75184	Soybean	cytosol	29.62	43.78
Bra010469.1-P	Field mustard	cytosol	41.58	43.71
VIT_02s0012g00350.t01	Wine grape	cytosol	41.03	43.64
PGSC0003DMT400018673	Potato	cytosol	33.15	43.57
TraesCS3A01G457700.1	Wheat	cytosol	43.75	43.51
TraesCS2A01G065400.1	Wheat	cytosol	43.48	43.48
Solyc02g071500.2.1	Tomato	cytosol	41.58	43.22
AT1G17010.1	Thale cress	cytosol	42.39	43.21
KRH58590	Soybean	cytosol	42.12	43.18
AT1G78550.1	Thale cress	cytosol, nucleus, peroxisome	41.58	42.98
Solyc02g071360.2.1	Tomato	cytosol	42.39	42.98
PGSC0003DMT400018663	Potato	cytosol	42.12	42.94
TraesCS2A01G065300.1	Wheat	cytosol	42.93	42.93
KRH21858	Soybean	cytosol	41.58	42.86
Solyc02g071430.2.1	Tomato	cytosol	42.39	42.86
Bra019177.1-P	Field mustard	cytosol	41.03	42.66
Bra026695.1-P	Field mustard	cytosol, nucleus, peroxisome	39.4	42.65
Solyc02g071410.2.1	Tomato	cytosol	41.58	42.5
Solyc02g071450.2.1	Tomato	cytosol	41.58	42.5
Bra010472.1-P	Field mustard	cytosol	41.3	42.46
KRH71023	Soybean	cytosol	41.3	42.46
Solyc02g071490.2.1	Tomato	cytosol	41.58	42.38
PGSC0003DMT400007989	Potato	cytosol	41.58	42.15
Solyc02g071480.2.1	Tomato	cytosol, nucleus, peroxisome	38.86	41.81
Bra026008.1-P	Field mustard	cytosol, nucleus, peroxisome	39.13	41.74
KRH27437	Soybean	cytosol	40.49	41.62
VIT_02s0012g00380.t01	Wine grape	cytosol	30.16	41.57
KRH43438	Soybean	nucleus	30.43	41.48
KRH13456	Soybean	cytosol	39.67	41.36
Bra035046.1-P	Field mustard	cytosol	40.22	41.34
KRH42495	Soybean	cytosol	39.67	41.01
KRH71025	Soybean	cytosol	39.67	41.01
PGSC0003DMT400007963	Potato	cytosol	40.76	40.98
VIT_02s0012g00410.t01	Wine grape	plastid	38.32	40.75
KRH27439	Soybean	cytosol	38.59	39.55
CDY69556	Canola	cytosol	4.08	39.47
PGSC0003DMT400008001	Potato	cytosol	38.32	39.39
Solyc08g062370.2.1	Tomato	cytoskeleton, cytosol, peroxisome	19.02	39.33
KRH71028	Soybean	cytosol	38.59	39.01
PGSC0003DMT400007992	Potato	cytosol, nucleus, peroxisome	38.32	38.95
TraesCS3A01G477000.2	Wheat	cytosol	37.23	38.92
PGSC0003DMT400007999	Potato	cytosol	37.5	38.87
KRH75001	Soybean	cytosol	36.96	38.86
PGSC0003DMT400055956	Potato	cytosol	18.75	38.76
PGSC0003DMT400018670	Potato	cytosol	36.68	38.68
TraesCS1A01G331300.1	Wheat	cytosol	36.68	38.24
Solyc02g071400.2.1	Tomato	cytosol	35.33	38.24
KRH21128	Soybean	cytosol	28.53	38.18
Solyc02g071380.2.1	Tomato	cytosol, nucleus, peroxisome	37.23	38.16
KRH11118	Soybean	cytosol, nucleus, peroxisome, plastid	38.32	37.9
TraesCS5A01G457300.1	Wheat	cytosol	35.33	37.46
KRG89247	Soybean	cytosol, peroxisome, plastid	23.91	37.29
KRH49750	Soybean	cytosol	35.05	36.75
KRG89246	Soybean	cytosol	35.87	36.57
KRH58593	Soybean	cytosol, peroxisome, plastid	35.87	36.36
TraesCS7A01G140200.1	Wheat	cytosol	32.88	36.34
TraesCS7A01G140100.1	Wheat	cytosol	26.36	36.19
TraesCS1A01G331400.1	Wheat	cytosol, peroxisome, plastid	37.77	35.82
KRH49748	Soybean	cytosol	35.6	35.79
PGSC0003DMT400059406	Potato	peroxisome	23.64	35.66
TraesCS7A01G140600.1	Wheat	cytosol	22.83	35.59
TraesCS1A01G320000.1	Wheat	cytosol	33.7	35.03
TraesCS7A01G051800.1	Wheat	cytosol	33.7	34.93
TraesCS7A01G140300.2	Wheat	cytosol	34.24	34.9
TraesCS7A01G141100.1	Wheat	cytosol	34.78	34.88
Bra013884.1-P	Field mustard	cytosol	41.58	34.85
TraesCS4A01G439800.1	Wheat	cytosol	33.7	34.83
TraesCS6A01G375200.1	Wheat	cytosol	33.7	34.73
TraesCS7A01G141000.1	Wheat	cytosol	33.7	34.73
TraesCS4A01G442500.1	Wheat	cytosol	33.15	34.37
TraesCS4A01G438300.1	Wheat	cytosol	32.88	33.99
TraesCS4A01G320100.1	Wheat	cytosol	30.71	33.83
TraesCS7A01G055900.1	Wheat	cytosol	32.61	33.8
PGSC0003DMT400007990	Potato	nucleus	19.84	33.8
TraesCS6A01G320700.1	Wheat	cytosol	30.16	33.53
TraesCS7A01G051200.1	Wheat	cytosol	32.34	33.43
TraesCS7A01G140900.1	Wheat	cytosol	32.34	33.33
TraesCS7A01G140500.1	Wheat	cytosol	22.28	32.93
TraesCS5A01G226400.1	Wheat	cytosol	31.79	32.32
TraesCS7A01G001400.1	Wheat	cytosol	28.8	32.12
TraesCS4A01G496600.1	Wheat	cytosol	29.08	31.66
TraesCS5A01G283100.2	Wheat	cytosol	30.71	31.65
TraesCS5A01G282700.1	Wheat	golgi	30.98	30.98
TraesCS1A01G320100.1	Wheat	cytosol	33.7	30.54
TraesCS5A01G282800.1	Wheat	cytosol	28.53	30.52
TraesCS6A01G148800.2	Wheat	cytosol	29.62	29.54
TraesCS6A01G375100.1	Wheat	plastid	26.63	28.57

Protein Annotations

EnsemblPlants:TraesCS3A01G407900.1	EnsemblPlantsGene:TraesCS3A01G407900	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF178	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SUPFAM:SSF51197	MapMan:50.1.13	:	:	:

Description

No Description!

Coordinates

chr3A:-:652909857..652911072

Molecular Weight (calculated)

40667.6 Da

IEP (calculated)

4.886

GRAVY (calculated)

-0.290

Length

368 amino acids

Sequence
(BLAST)

001: MSDPMDDAKP RNLGGSLPVP NVQALAARTD ELALTPTLLR RYVRPQPNTV DLRPDAPAGA EQEHVPVIDL GRLLAGGRDE EAARLRSACE DWGFFQVVNH
101: GIPEEILEEM KRNVMEFFAL PLAEKAALAQ EPGGVEGYGQ AFVVSEEQTL DWADMLFLLT QPPSYRDLHL WPSRPSTFKN CLESYSVEVQ RVAGELLGAM
201: AENLGVRDHS DLTRLAASQS VRMNYYPPCP EAHVDRMLGL SPHSDAVGLT LLLQVSPVPG LQIRRNGGWL PVTPLPGALI VNVGDVIEVL TNGKYKSVEH
301: RAVVNTREER MSMATFHNGN FGTTYGPLKE VVGEEEPRYR NVSVEEYTKL VFSSKLDGKN IMDAMKIN

Best Arabidopsis Sequence Match ( AT1G17020.1 )
(BLAST)

001: MEAKGAAQWS SILVPSVQEM VKEKTITTVP PRYVRSDQDK TEVDDDFDVK IEIPIIDMKR LCSSTTMDSE VEKLDFACKE WGFFQLVNHG IDSSFLDKVK
101: SEIQDFFNLP MEEKKKFWQR PDEIEGFGQA FVVSEDQKLD WADLFFHTVQ PVELRKPHLF PKLPLPFRDT LEMYSSEVQS VAKILIAKMA RALEIKPEEL
201: EKLFDDVDSV QSMRMNYYPP CPQPDQVIGL TPHSDSVGLT VLMQVNDVEG LQIKKDGKWV PVKPLPNAFI VNIGDVLEII TNGTYRSIEH RGVVNSEKER
301: LSIATFHNVG MYKEVGPAKS LVERQKVARF KRLTMKEYND GLFSRTLDGK AYLDALRI

Arabidopsis Description

SRG1Protein SRG1 [Source:UniProtKB/Swiss-Prot;Acc:Q39224]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.