Factsheet for Zm00001d012819_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37090	Sorghum	cytosol	87.64	88.12
EES08209	Sorghum	cytosol	84.62	84.15
KXG37089	Sorghum	cytosol	82.97	84.12
TraesCS3D01G013500.1	Wheat	mitochondrion	30.49	65.68
Os03t0856000-01	Rice	cytosol	65.11	65.47
HORVU3Hr1G091210.2	Barley	cytosol	64.56	63.17
TraesCS3A01G407800.1	Wheat	cytosol	63.46	62.6
TraesCSU01G175100.1	Wheat	cytosol	55.49	62.35
TraesCS3D01G403000.1	Wheat	cytosol	62.91	62.06
TraesCS3A01G407900.1	Wheat	cytosol	62.64	61.96
TraesCS3B01G440500.1	Wheat	cytosol	62.09	61.25
TraesCSU01G044600.1	Wheat	mitochondrion	34.62	61.16
Zm00001d040597_P001	Maize	cytosol	50.82	51.97
Zm00001d029218_P001	Maize	cytosol, peroxisome, plastid	43.68	51.62
VIT_02s0012g00320.t01	Wine grape	cytosol	36.54	48.72
Zm00001d048547_P001	Maize	cytosol, peroxisome, plastid	47.53	48.46
VIT_02s0012g00390.t01	Wine grape	cytosol	45.88	47.31
VIT_02s0012g00450.t01	Wine grape	cytosol, nucleus, peroxisome	45.33	46.74
Zm00001d041086_P001	Maize	cytosol	45.6	46.5
VIT_02s0012g00400.t01	Wine grape	cytosol, peroxisome, plastid	43.13	45.38
VIT_02s0012g00360.t01	Wine grape	cytosol	41.21	44.64
Bra010470.1-P	Field mustard	cytosol	32.69	44.57
VIT_02s0012g00440.t01	Wine grape	extracellular	15.38	42.75
Solyc02g071430.2.1	Tomato	cytosol	42.58	42.58
Zm00001d042192_P001	Maize	extracellular	42.58	42.35
AT4G25310.1	Thale cress	cytosol	40.93	42.21
PGSC0003DMT400007989	Potato	cytosol	42.03	42.15
AT4G25300.1	Thale cress	cytosol	41.21	42.13
CDY69556	Canola	cytosol	4.4	42.11
KRH71023	Soybean	cytosol	41.21	41.9
Bra026693.1-P	Field mustard	cytosol	40.93	41.62
Bra010472.1-P	Field mustard	cytosol	40.93	41.62
VIT_02s0012g00350.t01	Wine grape	cytosol	39.56	41.62
AT1G17020.1	Thale cress	cytosol	40.66	41.34
Bra019177.1-P	Field mustard	cytosol	40.11	41.24
Solyc02g071360.2.1	Tomato	cytosol	40.93	41.05
PGSC0003DMT400007963	Potato	cytosol	41.21	40.98
KRH58590	Soybean	cytosol	40.38	40.95
VIT_02s0012g00410.t01	Wine grape	plastid	38.74	40.75
AT1G17010.1	Thale cress	cytosol	40.38	40.72
KRH21858	Soybean	cytosol	39.84	40.62
Bra026695.1-P	Field mustard	cytosol, nucleus, peroxisome	37.91	40.59
KRH75001	Soybean	cytosol	38.74	40.29
Zm00001d029636_P001	Maize	extracellular	39.84	40.28
KRH13456	Soybean	cytosol	39.01	40.23
KRH42495	Soybean	cytosol	39.29	40.17
KRH75184	Soybean	cytosol	27.2	39.76
Bra010469.1-P	Field mustard	cytosol	38.19	39.71
VIT_02s0012g00380.t01	Wine grape	cytosol	29.12	39.7
KRH71025	Soybean	cytosol	38.46	39.33
Bra035046.1-P	Field mustard	cytosol	38.46	39.11
KRH27437	Soybean	cytosol	38.19	38.83
PGSC0003DMT400008001	Potato	cytosol	38.19	38.83
Solyc02g071400.2.1	Tomato	cytosol	36.26	38.82
AT1G78550.1	Thale cress	cytosol, nucleus, peroxisome	37.91	38.76
KRH71028	Soybean	cytosol	38.74	38.74
KRH27439	Soybean	cytosol	38.19	38.72
Bra026008.1-P	Field mustard	cytosol, nucleus, peroxisome	36.54	38.55
PGSC0003DMT400018663	Potato	cytosol	37.91	38.23
Solyc02g071380.2.1	Tomato	cytosol, nucleus, peroxisome	37.36	37.88
Solyc02g071490.2.1	Tomato	cytosol	37.36	37.67
PGSC0003DMT400007992	Potato	cytosol, nucleus, peroxisome	37.36	37.57
PGSC0003DMT400007999	Potato	cytosol	36.54	37.46
Solyc02g071440.2.1	Tomato	cytosol	35.99	37.43
Solyc08g062370.2.1	Tomato	cytoskeleton, cytosol, peroxisome	18.13	37.08
PGSC0003DMT400055956	Potato	cytosol	17.86	36.52
Solyc02g071500.2.1	Tomato	cytosol	35.44	36.44
PGSC0003DMT400018673	Potato	cytosol	28.02	36.43
Solyc02g071470.2.1	Tomato	cytosol	35.71	36.11
KRH43438	Soybean	nucleus	26.65	35.93
Solyc02g071450.2.1	Tomato	cytosol	35.16	35.56
Solyc02g071480.2.1	Tomato	cytosol, nucleus, peroxisome	33.24	35.38
KRH49750	Soybean	cytosol	33.52	34.76
Solyc02g071410.2.1	Tomato	cytosol	34.34	34.72
PGSC0003DMT400018670	Potato	cytosol	32.97	34.38
KRG89246	Soybean	cytosol	34.07	34.35
PGSC0003DMT400007990	Potato	nucleus	20.33	34.26
KRH21128	Soybean	cytosol	25.82	34.18
KRH11118	Soybean	cytosol, nucleus, peroxisome, plastid	34.34	33.6
KRH58593	Soybean	cytosol, peroxisome, plastid	33.24	33.33
KRG89247	Soybean	cytosol, peroxisome, plastid	21.43	33.05
Bra013884.1-P	Field mustard	cytosol	39.56	32.8
Zm00001d045145_P001	Maize	peroxisome	32.14	32.77
PGSC0003DMT400059406	Potato	peroxisome	21.7	32.38
KRH49748	Soybean	cytosol	32.42	32.24
Zm00001d045141_P001	Maize	cytosol	24.45	31.79
Zm00001d030548_P001	Maize	extracellular	30.49	31.44
Zm00001d041087_P001	Maize	cytosol	40.38	30.75
Zm00001d037487_P001	Maize	cytosol	30.49	30.75

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	UniProt:A0A1D6GCY9	ProteinID:AQK61501.1	InterPro:DIOX_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872
GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF178	SUPFAM:SSF51197	UniParc:UPI0001CAA9E4
EnsemblPlantsGene:Zm00001d012819	EnsemblPlants:Zm00001d012819_P001	EnsemblPlants:Zm00001d012819_T001	SEG:seg	:	:

Description

Protein SRG1

Coordinates

chr5:-:846193..847287

Molecular Weight (calculated)

39156.4 Da

IEP (calculated)

5.647

GRAVY (calculated)

-0.138

Length

364 amino acids

Sequence
(BLAST)

001: MDAKPRNLGG SLPVPNVQDL AARPGDELTP PVLSRYLRDD VDGADANGDA ASSVPVVDLA RLLDPSSHGD EESAKLKAAC EEWGFFQVIN HGVPDAVVAD
101: VKADLQAFFR LPLADKRAVA QEPGGIEGYG QAFVVSEDQK LDWADMLFLS TQPPEYRAPR FWPARPATFG DSLARYSAEV QRVAARLLAS MAANLGVADA
201: ARLARVADAQ AVRVNYYPAC PHGRGRVLGL SPHSDAAGLT LLLQVSAVPG LQIRRRGAWI SVDPIPGALV ANVGDVVEVL TNGRYKSIEH RALVSPTHHR
301: VSVAAFHSAR FGDTYAPLEE TIVDGDEPAR YRSIGVEDYV RLVLSSKLQG KNIMDAMKIN PVTE

Best Arabidopsis Sequence Match ( AT4G25300.1 )
(BLAST)

001: MEVKGATRSS IIVPSVQEMV KEKMITTVPP RYVRSDQDVA EIAVDSGLRN QIPIIDMSLL CSSTSMDSEI DKLDSACKEW GFFQLVNHGM ESSFLNKVKS
101: EVQDFFNLPM EEKKNLWQQP DEIEGFGQVF VVSEEQKLDW ADMFFLTMQP VRLRKPHLFP KLPLPFRDTL DMYSAEVKSI AKILLGKIAV ALKIKPEEMD
201: KLFDDELGQR IRLNYYPRCP EPDKVIGLTP HSDSTGLTIL LQANEVEGLQ IKKNAKWVSV KPLPNALVVN VGDILEIITN GTYRSIEHRG VVNSEKERLS
301: VAAFHNIGLG KEIGPMRSLV ERHKAAFFKS VTTEEYFNGL FSRELDGKAY LDVMRL

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SB33]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.