Factsheet for TraesCS3A01G407800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G403000.1	Wheat	cytosol	94.85	94.85
TraesCS3B01G440500.1	Wheat	cytosol	93.22	93.22
HORVU3Hr1G091210.2	Barley	cytosol	91.6	90.86
TraesCS3A01G407900.1	Wheat	cytosol	86.99	87.23
TraesCSU01G175100.1	Wheat	cytosol	73.98	84.26
TraesCSU01G044600.1	Wheat	mitochondrion	43.09	77.18
Os03t0856000-01	Rice	cytosol	65.58	66.85
EES08209	Sorghum	cytosol	64.23	64.75
KXG37090	Sorghum	cytosol	62.6	63.81
KXG37089	Sorghum	cytosol	62.06	63.79
Zm00001d012819_P001	Maize	cytosol	62.6	63.46
VIT_02s0012g00320.t01	Wine grape	cytosol	38.48	52.01
Bra010470.1-P	Field mustard	cytosol	34.96	48.31
TraesCS5A01G539800.1	Wheat	cytosol	45.53	48.28
TraesCS5A01G539700.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	44.72	47.97
VIT_02s0012g00390.t01	Wine grape	cytosol	45.8	47.88
TraesCS3A01G524700.1	Wheat	cytosol	45.26	47.58
VIT_02s0012g00450.t01	Wine grape	cytosol, nucleus, peroxisome	44.99	47.03
VIT_02s0012g00360.t01	Wine grape	cytosol	42.82	47.02
Bra026693.1-P	Field mustard	cytosol	45.26	46.65
VIT_02s0012g00440.t01	Wine grape	extracellular	16.53	46.56
AT1G17020.1	Thale cress	cytosol	44.72	46.09
VIT_02s0012g00400.t01	Wine grape	cytosol, peroxisome, plastid	42.82	45.66
TraesCS5A01G539900.1	Wheat	cytosol	39.02	45.28
TraesCS2A01G065400.1	Wheat	cytosol	44.99	45.11
AT4G25300.1	Thale cress	cytosol	43.36	44.94
TraesCS2A01G065300.1	Wheat	cytosol	44.72	44.84
AT4G25310.1	Thale cress	cytosol	42.82	44.76
KRH75184	Soybean	cytosol	30.08	44.58
TraesCS2A01G065600.1	Wheat	cytoskeleton, cytosol, peroxisome	43.9	44.26
VIT_02s0012g00350.t01	Wine grape	cytosol	41.46	44.22
TraesCS1A01G221200.1	Wheat	cytosol	42.28	44.07
TraesCS3A01G457700.1	Wheat	cytosol	44.17	44.05
Solyc02g071360.2.1	Tomato	cytosol	43.09	43.8
KRH58590	Soybean	cytosol	42.55	43.73
TraesCS2A01G065800.1	Wheat	cytosol	43.36	43.72
Bra010472.1-P	Field mustard	cytosol	42.28	43.58
AT1G78550.1	Thale cress	cytosol, nucleus, peroxisome	42.01	43.54
PGSC0003DMT400007989	Potato	cytosol	42.82	43.53
KRH21858	Soybean	cytosol	42.01	43.42
KRH13456	Soybean	cytosol	41.46	43.34
Bra026695.1-P	Field mustard	cytosol, nucleus, peroxisome	39.84	43.24
AT1G17010.1	Thale cress	cytosol	42.28	43.21
Bra010469.1-P	Field mustard	cytosol	40.92	43.14
TraesCS2A01G065500.1	Wheat	cytosol	42.82	43.05
KRH71023	Soybean	cytosol	41.73	43.02
Bra019177.1-P	Field mustard	cytosol	41.19	42.94
KRH27437	Soybean	cytosol	41.46	42.74
KRH43438	Soybean	nucleus	31.17	42.59
Solyc02g071440.2.1	Tomato	cytosol	40.38	42.57
Solyc02g071470.2.1	Tomato	cytosol	41.46	42.5
KRH42495	Soybean	cytosol	40.92	42.42
PGSC0003DMT400018673	Potato	cytosol	31.98	42.14
Solyc02g071500.2.1	Tomato	cytosol	40.38	42.09
PGSC0003DMT400018663	Potato	cytosol	40.92	41.83
Solyc02g071430.2.1	Tomato	cytosol	41.19	41.76
Bra026008.1-P	Field mustard	cytosol, nucleus, peroxisome	39.02	41.74
Bra035046.1-P	Field mustard	cytosol	40.38	41.62
KRH71025	Soybean	cytosol	39.84	41.29
Solyc02g071490.2.1	Tomato	cytosol	40.38	41.27
VIT_02s0012g00380.t01	Wine grape	cytosol	29.81	41.2
KRH27439	Soybean	cytosol	39.84	40.95
KRH75001	Soybean	cytosol	38.48	40.57
Solyc08g062370.2.1	Tomato	cytoskeleton, cytosol, peroxisome	19.51	40.45
PGSC0003DMT400007963	Potato	cytosol	40.11	40.44
Solyc02g071410.2.1	Tomato	cytosol	39.3	40.28
Solyc02g071450.2.1	Tomato	cytosol	39.3	40.28
KRH71028	Soybean	cytosol	39.57	40.11
PGSC0003DMT400055956	Potato	cytosol	19.24	39.89
VIT_02s0012g00410.t01	Wine grape	plastid	37.4	39.88
PGSC0003DMT400007999	Potato	cytosol	38.21	39.72
PGSC0003DMT400007992	Potato	cytosol, nucleus, peroxisome	38.21	38.95
Solyc02g071480.2.1	Tomato	cytosol, nucleus, peroxisome	36.04	38.89
PGSC0003DMT400008001	Potato	cytosol	37.67	38.83
KRH21128	Soybean	cytosol	28.73	38.55
Solyc02g071380.2.1	Tomato	cytosol, nucleus, peroxisome	37.4	38.44
TraesCS3A01G477000.2	Wheat	cytosol	36.59	38.35
TraesCS1A01G331300.1	Wheat	cytosol	36.59	38.24
Solyc02g071400.2.1	Tomato	cytosol	35.23	38.24
KRH11118	Soybean	cytosol, nucleus, peroxisome, plastid	38.48	38.17
KRG89247	Soybean	cytosol, peroxisome, plastid	24.39	38.14
PGSC0003DMT400018670	Potato	cytosol	36.04	38.11
TraesCS5A01G457300.1	Wheat	cytosol	35.23	37.46
PGSC0003DMT400059406	Potato	peroxisome	24.39	36.89
CDY69556	Canola	cytosol	3.79	36.84
KRH58593	Soybean	cytosol, peroxisome, plastid	36.04	36.64
KRH49750	Soybean	cytosol	34.69	36.47
TraesCS1A01G331400.1	Wheat	cytosol, peroxisome, plastid	37.94	36.08
KRH49748	Soybean	cytosol	35.77	36.07
KRG89246	Soybean	cytosol	34.96	35.73
TraesCS7A01G140600.1	Wheat	cytosol	22.76	35.59
TraesCS7A01G140200.1	Wheat	cytosol	31.71	35.14
TraesCS7A01G140100.1	Wheat	cytosol	25.2	34.7
Bra013884.1-P	Field mustard	cytosol	40.92	34.4
TraesCS7A01G140300.2	Wheat	cytosol	33.6	34.35
TraesCS7A01G141100.1	Wheat	cytosol	34.15	34.33
TraesCS7A01G141000.1	Wheat	cytosol	33.06	34.17
TraesCS6A01G320700.1	Wheat	cytosol	30.35	33.84
TraesCS7A01G001400.1	Wheat	cytosol	30.08	33.64
TraesCS6A01G375200.1	Wheat	cytosol	32.52	33.61
TraesCS4A01G320100.1	Wheat	cytosol	30.35	33.53
PGSC0003DMT400007990	Potato	nucleus	19.51	33.33
TraesCS7A01G140500.1	Wheat	cytosol	22.49	33.33
TraesCS7A01G140900.1	Wheat	cytosol	32.25	33.33
TraesCS4A01G442500.1	Wheat	cytosol	31.98	33.24
TraesCS7A01G051800.1	Wheat	cytosol	31.98	33.24
TraesCS4A01G439800.1	Wheat	cytosol	31.98	33.15
TraesCS4A01G438300.1	Wheat	cytosol	31.71	32.87
TraesCS7A01G055900.1	Wheat	cytosol	31.44	32.68
TraesCS7A01G051200.1	Wheat	cytosol	31.44	32.58
TraesCS4A01G496600.1	Wheat	cytosol	29.81	32.54
TraesCS1A01G320000.1	Wheat	cytosol	31.17	32.49
TraesCS5A01G283100.2	Wheat	cytosol	30.89	31.93
TraesCS5A01G226400.1	Wheat	cytosol	30.62	31.22
TraesCS5A01G282700.1	Wheat	golgi	30.89	30.98
TraesCS5A01G282800.1	Wheat	cytosol	28.73	30.81
TraesCS6A01G148800.2	Wheat	cytosol	29.27	29.27
TraesCS1A01G320100.1	Wheat	cytosol	31.44	28.57
TraesCS6A01G375100.1	Wheat	plastid	25.75	27.7

Protein Annotations

EnsemblPlants:TraesCS3A01G407800.1	EnsemblPlantsGene:TraesCS3A01G407800	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF178	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SUPFAM:SSF51197	MapMan:50.1.13	:	:	:

Description

No Description!

Coordinates

chr3A:-:652830385..652831599

Molecular Weight (calculated)

40759.6 Da

IEP (calculated)

4.897

GRAVY (calculated)

-0.325

Length

369 amino acids

Sequence
(BLAST)

001: MADPKPRNLG GSLPVPNVQD LAGRPDELTL TPTLLRRYVR PQPNTADLRP DAPAGEEQEH VPIIDLGRLL GPDDLAGGRD EEAARLRSAC EDWGFFQVVN
101: HGIPEETLEE MKRNVMGFFA LPLAEKAAFA QRPGEIEGYG QAFVVSEEQT LDWADMFFLL TQPPSYRDLR LWPSNPSTFK NCLENYSAEV QRVAGELLGA
201: MAENLGVRDH SDMTRLAASQ SVRMNYYPPC PEAHVDSVLG LSPHSDAVGL TLLLQVSKVP GLQIRRKGGW VPVTPLPGAL VVNVGDVIEV FTNGKYRSVE
301: HRAVVNARHE RMSIATFHSG KFGTMYGPLE EAVGDEEPRY RSISVEEYVK LVVSSKLDGK NIMDAMKID

Best Arabidopsis Sequence Match ( AT1G17020.1 )
(BLAST)

001: MEAKGAAQWS SILVPSVQEM VKEKTITTVP PRYVRSDQDK TEVDDDFDVK IEIPIIDMKR LCSSTTMDSE VEKLDFACKE WGFFQLVNHG IDSSFLDKVK
101: SEIQDFFNLP MEEKKKFWQR PDEIEGFGQA FVVSEDQKLD WADLFFHTVQ PVELRKPHLF PKLPLPFRDT LEMYSSEVQS VAKILIAKMA RALEIKPEEL
201: EKLFDDVDSV QSMRMNYYPP CPQPDQVIGL TPHSDSVGLT VLMQVNDVEG LQIKKDGKWV PVKPLPNAFI VNIGDVLEII TNGTYRSIEH RGVVNSEKER
301: LSIATFHNVG MYKEVGPAKS LVERQKVARF KRLTMKEYND GLFSRTLDGK AYLDALRI

Arabidopsis Description

SRG1Protein SRG1 [Source:UniProtKB/Swiss-Prot;Acc:Q39224]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.