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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • peroxisome 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:peroxisome
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG37090 Sorghum cytosol 90.25 89.5
EES08209 Sorghum cytosol 90.81 89.07
Zm00001d012819_P001 Maize cytosol 84.12 82.97
TraesCS3D01G013500.1 Wheat mitochondrion 31.2 66.27
Os03t0856000-01 Rice cytosol 63.51 62.98
TraesCSU01G175100.1 Wheat cytosol 56.82 62.96
TraesCS3A01G407800.1 Wheat cytosol 63.79 62.06
HORVU3Hr1G091210.2 Barley cytosol 63.79 61.56
TraesCS3A01G407900.1 Wheat cytosol 62.95 61.41
TraesCS3B01G440500.1 Wheat cytosol 62.95 61.25
TraesCSU01G044600.1 Wheat mitochondrion 35.1 61.16
TraesCS3D01G403000.1 Wheat cytosol 62.4 60.7
EES02838 Sorghum cytosol 46.8 47.59
EER95699 Sorghum cytosol 46.8 47.32
VIT_02s0012g00320.t01 Wine grape cytosol 35.93 47.25
EES15940 Sorghum cytosol 46.52 46.65
VIT_02s0012g00450.t01 Wine grape cytosol, nucleus, peroxisome 45.4 46.18
KXG32356 Sorghum plastid 44.29 45.82
Bra010470.1-P Field mustard cytosol 33.7 45.32
EER91935 Sorghum cytosol 45.4 45.28
EER91934 Sorghum cytosol 44.57 44.57
VIT_02s0012g00390.t01 Wine grape cytosol 43.45 44.19
VIT_02s0012g00360.t01 Wine grape cytosol 41.23 44.05
AT4G25310.1 Thale cress cytosol 42.62 43.34
KXG34760 Sorghum cytosol 42.9 42.9
AT1G17020.1 Thale cress cytosol 42.62 42.74
VIT_02s0012g00400.t01 Wine grape cytosol, peroxisome, plastid 40.95 42.49
OQU92563 Sorghum cytosol 44.01 42.47
CDY69556 Canola cytosol 4.46 42.11
Solyc02g071430.2.1 Tomato cytosol 42.62 42.03
VIT_02s0012g00440.t01 Wine grape extracellular 15.32 41.98
Bra026693.1-P Field mustard cytosol 41.5 41.62
AT4G25300.1 Thale cress cytosol 41.23 41.57
Bra010469.1-P Field mustard cytosol 40.39 41.43
KRH13456 Soybean cytosol 40.39 41.08
PGSC0003DMT400007989 Potato cytosol 41.5 41.05
VIT_02s0012g00350.t01 Wine grape cytosol 39.55 41.04
Bra019177.1-P Field mustard cytosol 40.39 40.96
KRH21858 Soybean cytosol 40.67 40.9
Solyc02g071360.2.1 Tomato cytosol 41.23 40.77
Bra026695.1-P Field mustard cytosol, nucleus, peroxisome 38.44 40.59
EES02842 Sorghum cytosol 43.45 40.52
Bra010472.1-P Field mustard cytosol 40.39 40.5
KRH27437 Soybean cytosol 40.39 40.5
KRH42495 Soybean cytosol 39.83 40.17
AT1G17010.1 Thale cress cytosol 40.39 40.17
PGSC0003DMT400007963 Potato cytosol 40.95 40.16
KRH58590 Soybean cytosol 40.11 40.11
KRH71023 Soybean cytosol 39.83 39.94
KRH75184 Soybean cytosol 27.58 39.76
EES04177 Sorghum cytosol 40.67 39.46
Bra026008.1-P Field mustard cytosol, nucleus, peroxisome 37.88 39.42
Solyc02g071400.2.1 Tomato cytosol 37.33 39.41
AT1G78550.1 Thale cress cytosol, nucleus, peroxisome 39.0 39.33
KRH71025 Soybean cytosol 39.0 39.33
Bra035046.1-P Field mustard cytosol 39.0 39.11
KRH27439 Soybean cytosol 39.0 39.0
OQU92296 Sorghum cytosol 39.0 39.0
VIT_02s0012g00380.t01 Wine grape cytosol 28.97 38.95
PGSC0003DMT400008001 Potato cytosol 38.72 38.83
EES12050 Sorghum cytosol 38.16 38.7
PGSC0003DMT400018663 Potato cytosol 38.72 38.5
VIT_02s0012g00410.t01 Wine grape plastid 37.05 38.44
KRH75001 Soybean cytosol 37.33 38.29
Solyc02g071440.2.1 Tomato cytosol 37.33 38.29
Solyc02g071490.2.1 Tomato cytosol 38.44 38.23
PGSC0003DMT400007992 Potato cytosol, nucleus, peroxisome 38.44 38.12
PGSC0003DMT400007999 Potato cytosol 37.6 38.03
Solyc02g071380.2.1 Tomato cytosol, nucleus, peroxisome 37.88 37.88
Solyc08g062370.2.1 Tomato cytoskeleton, cytosol, peroxisome 18.66 37.64
KRH71028 Soybean cytosol 38.16 37.64
PGSC0003DMT400018673 Potato cytosol 29.25 37.5
PGSC0003DMT400055956 Potato cytosol 18.38 37.08
Solyc02g071500.2.1 Tomato cytosol 36.49 37.01
KRH43438 Soybean nucleus 27.58 36.67
Solyc02g071450.2.1 Tomato cytosol 36.21 36.11
Solyc02g071480.2.1 Tomato cytosol, nucleus, peroxisome 34.26 35.96
Solyc02g071470.2.1 Tomato cytosol 35.93 35.83
KRH11118 Soybean cytosol, nucleus, peroxisome, plastid 36.77 35.48
Solyc02g071410.2.1 Tomato cytosol 35.38 35.28
KRG89247 Soybean cytosol, peroxisome, plastid 23.12 35.17
KRH49750 Soybean cytosol 34.26 35.04
KRH49748 Soybean cytosol 35.65 34.97
PGSC0003DMT400018670 Potato cytosol 33.98 34.96
KRG89246 Soybean cytosol 35.1 34.9
KRH21128 Soybean cytosol 26.46 34.55
KXG19500 Sorghum cytosol, endoplasmic reticulum, peroxisome 42.9 34.53
KRH58593 Soybean cytosol, peroxisome, plastid 34.82 34.44
OQU75951 Sorghum cytosol 33.15 34.39
EER89306 Sorghum cytosol 34.26 34.26
KXG29110 Sorghum cytosol 34.54 34.07
EER88660 Sorghum cytosol 34.82 34.06
KXG39676 Sorghum cytosol, endoplasmic reticulum, peroxisome 37.88 34.0
PGSC0003DMT400007990 Potato nucleus 20.06 33.33
OQU92565 Sorghum mitochondrion, plastid 25.63 33.09
PGSC0003DMT400059406 Potato peroxisome 21.73 31.97
Bra013884.1-P Field mustard cytosol 38.72 31.66
EER87956 Sorghum peroxisome 30.92 30.58
EER87960 Sorghum cytosol 14.48 29.55
KXG19442 Sorghum cytosol 30.36 29.54
EER87955 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 31.2 28.72
Protein Annotations
Gene3D:2.60.120.330MapMan:50.1.13EntrezGene:8061383UniProt:A0A1B6QGQ6InterPro:DIOX_NGO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0046872
GO:GO:0055114InterPro:IPNS-likeInterPro:IPR005123InterPro:IPR027443EnsemblPlants:KXG37089ProteinID:KXG37089
ProteinID:KXG37089.2InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171PFAM:PF14226PFscan:PS51471PANTHER:PTHR10209
PANTHER:PTHR10209:SF178EnsemblPlantsGene:SORBI_3001G006101SUPFAM:SSF51197UniParc:UPI0001A827BCRefSeq:XP_002466069.1SEG:seg
Description
hypothetical protein
Coordinates
chr1:-:568261..570006
Molecular Weight (calculated)
38572.0 Da
IEP (calculated)
5.557
GRAVY (calculated)
-0.044
Length
359 amino acids
Sequence
(BLAST)
001: MDAKPQNLGG SLPVPNVQDL AARPADELTP LVLHRYIRDD VDADANGDAA ASVPVVDLAR LLDPSHGEQE AAKLKAACED WGFFQVLNHG VPDAVIADVK
101: ADLQAFFGLP LAEKAAVAQE PGSIEGYGQH FVISADQKLD WADVLFLFTQ PLEYRAPRFW PARPATFADS LDRYSGEVQR VATSLLAAMA ANLGVADARK
201: LTRIADSQSM RINYYPACPG GAHGRVLGLS PHSDAVGLTL LLQVSAVPGL QIRRHGAWVS VDPIPGALVA NVGDVVEVLT NGRYKSIEHR AVVSPTHDRV
301: SVAAFHSAKF GGTYAPLEET MVHGEPPGYK TISVEDYVRM LLSCKLEGKN IMDAMKINP
Best Arabidopsis Sequence Match ( AT4G25300.1 )
(BLAST)
001: MEVKGATRSS IIVPSVQEMV KEKMITTVPP RYVRSDQDVA EIAVDSGLRN QIPIIDMSLL CSSTSMDSEI DKLDSACKEW GFFQLVNHGM ESSFLNKVKS
101: EVQDFFNLPM EEKKNLWQQP DEIEGFGQVF VVSEEQKLDW ADMFFLTMQP VRLRKPHLFP KLPLPFRDTL DMYSAEVKSI AKILLGKIAV ALKIKPEEMD
201: KLFDDELGQR IRLNYYPRCP EPDKVIGLTP HSDSTGLTIL LQANEVEGLQ IKKNAKWVSV KPLPNALVVN VGDILEIITN GTYRSIEHRG VVNSEKERLS
301: VAAFHNIGLG KEIGPMRSLV ERHKAAFFKS VTTEEYFNGL FSRELDGKAY LDVMRL
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SB33]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.