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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • peroxisome 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d029636_P001 Maize extracellular 90.25 90.0
EES12050 Sorghum cytosol 69.36 70.34
Os03t0439500-01 Rice cytosol 68.8 66.4
KXG39676 Sorghum cytosol, endoplasmic reticulum, peroxisome 63.51 57.0
GSMUA_AchrUn_... Banana cytosol, peroxisome 33.98 42.96
EER91934 Sorghum cytosol 42.62 42.62
GSMUA_Achr11P... Banana cytosol 42.06 42.54
GSMUA_Achr11P... Banana cytosol 30.36 42.41
GSMUA_AchrUn_... Banana cytosol, peroxisome 25.07 42.06
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 41.23 41.69
GSMUA_Achr11P... Banana cytosol 40.95 41.29
GSMUA_Achr5P20940_001 Banana cytosol 41.23 41.23
VIT_02s0012g00320.t01 Wine grape cytosol 31.2 41.03
EES02838 Sorghum cytosol 40.11 40.79
GSMUA_Achr11P... Banana cytosol, peroxisome, plastid 40.11 40.56
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 39.55 40.11
Bra010470.1-P Field mustard cytosol 29.8 40.07
KRH21858 Soybean cytosol 39.83 40.06
VIT_02s0012g00450.t01 Wine grape cytosol, nucleus, peroxisome 39.0 39.66
EER91935 Sorghum cytosol 39.28 39.17
KXG37089 Sorghum cytosol 39.0 39.0
KXG32356 Sorghum plastid 37.6 38.9
VIT_02s0012g00390.t01 Wine grape cytosol 37.88 38.53
EES08209 Sorghum cytosol 39.28 38.52
EES02842 Sorghum cytosol 40.95 38.18
VIT_02s0012g00440.t01 Wine grape extracellular 13.93 38.17
KXG37090 Sorghum cytosol 38.44 38.12
AT1G17020.1 Thale cress cytosol 37.88 37.99
KRH27437 Soybean cytosol 37.88 37.99
KRH13456 Soybean cytosol 37.33 37.96
Solyc02g071430.2.1 Tomato cytosol 38.44 37.91
OQU92563 Sorghum cytosol 39.28 37.9
Bra010469.1-P Field mustard cytosol 36.77 37.71
VIT_02s0012g00360.t01 Wine grape cytosol 35.1 37.5
KRH75184 Soybean cytosol 25.91 37.35
KRH27439 Soybean cytosol 37.33 37.33
Bra010472.1-P Field mustard cytosol 37.05 37.15
PGSC0003DMT400008001 Potato cytosol 37.05 37.15
AT4G25310.1 Thale cress cytosol 36.49 37.11
PGSC0003DMT400007992 Potato cytosol, nucleus, peroxisome 37.33 37.02
VIT_02s0012g00400.t01 Wine grape cytosol, peroxisome, plastid 35.65 36.99
PGSC0003DMT400007999 Potato cytosol 36.49 36.9
Bra019177.1-P Field mustard cytosol 36.21 36.72
AT1G78550.1 Thale cress cytosol, nucleus, peroxisome 36.21 36.52
Solyc02g071380.2.1 Tomato cytosol, nucleus, peroxisome 36.21 36.21
EER95699 Sorghum cytosol 35.65 36.06
Bra026693.1-P Field mustard cytosol 35.93 36.03
AT4G25300.1 Thale cress cytosol 35.65 35.96
KRH43438 Soybean nucleus 27.02 35.93
PGSC0003DMT400007963 Potato cytosol 36.49 35.79
Bra035046.1-P Field mustard cytosol 35.65 35.75
Bra026695.1-P Field mustard cytosol, nucleus, peroxisome 33.7 35.59
VIT_02s0012g00380.t01 Wine grape cytosol 26.46 35.58
PGSC0003DMT400007989 Potato cytosol 35.93 35.54
KRH71023 Soybean cytosol 35.38 35.47
AT1G17010.1 Thale cress cytosol 35.65 35.46
KRH42495 Soybean cytosol 35.1 35.39
KRH58590 Soybean cytosol 35.38 35.38
KRH75001 Soybean cytosol 34.26 35.14
KRH71025 Soybean cytosol 34.82 35.11
EES15940 Sorghum cytosol 34.82 34.92
Solyc02g071360.2.1 Tomato cytosol 35.1 34.71
Bra026008.1-P Field mustard cytosol, nucleus, peroxisome 33.15 34.49
Solyc02g071400.2.1 Tomato cytosol 32.59 34.41
KRH71028 Soybean cytosol 34.82 34.34
KRG89247 Soybean cytosol, peroxisome, plastid 22.56 34.32
PGSC0003DMT400055956 Potato cytosol 16.99 34.27
Solyc08g062370.2.1 Tomato cytoskeleton, cytosol, peroxisome 16.99 34.27
VIT_02s0012g00410.t01 Wine grape plastid 32.59 33.81
PGSC0003DMT400007990 Potato nucleus 20.33 33.8
KXG34760 Sorghum cytosol 33.7 33.7
KRH21128 Soybean cytosol 25.63 33.45
VIT_02s0012g00350.t01 Wine grape cytosol 32.03 33.24
PGSC0003DMT400018673 Potato cytosol 25.91 33.21
EES04177 Sorghum cytosol 33.43 32.43
KRG89246 Soybean cytosol 32.31 32.13
Solyc02g071500.2.1 Tomato cytosol 31.48 31.92
KRH49750 Soybean cytosol 31.2 31.91
KRH58593 Soybean cytosol, peroxisome, plastid 32.03 31.68
PGSC0003DMT400018663 Potato cytosol 31.75 31.58
Solyc02g071490.2.1 Tomato cytosol 31.75 31.58
Solyc02g071440.2.1 Tomato cytosol 30.64 31.43
KRH49748 Soybean cytosol 31.75 31.15
OQU92565 Sorghum mitochondrion, plastid 23.96 30.94
Solyc02g071470.2.1 Tomato cytosol 30.92 30.83
PGSC0003DMT400059406 Potato peroxisome 20.89 30.74
Solyc02g071450.2.1 Tomato cytosol 30.64 30.56
KXG19500 Sorghum cytosol, endoplasmic reticulum, peroxisome 37.6 30.27
Solyc02g071480.2.1 Tomato cytosol, nucleus, peroxisome 28.69 30.12
KRH11118 Soybean cytosol, nucleus, peroxisome, plastid 31.2 30.11
PGSC0003DMT400018670 Potato cytosol 29.25 30.09
Solyc02g071410.2.1 Tomato cytosol 29.8 29.72
KXG19442 Sorghum cytosol 29.53 28.73
OQU75951 Sorghum cytosol 27.02 28.03
Bra013884.1-P Field mustard cytosol 33.7 27.56
EER88660 Sorghum cytosol 27.86 27.25
KXG29110 Sorghum cytosol 27.58 27.2
EER87956 Sorghum peroxisome 27.3 27.0
EER89306 Sorghum cytosol 26.18 26.18
EER87960 Sorghum cytosol 12.53 25.57
EER87955 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 27.02 24.87
GSMUA_AchrUn_... Banana mitochondrion 34.54 20.1
Protein Annotations
Gene3D:2.60.120.330MapMan:50.1.13UniProt:A0A1Z5S8Z6InterPro:DIOX_NGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0055114
InterPro:IPNS-likeInterPro:IPR005123InterPro:IPR027443EnsemblPlants:OQU92296ProteinID:OQU92296ProteinID:OQU92296.1
InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171PFAM:PF14226PFscan:PS51471PANTHER:PTHR10209PANTHER:PTHR10209:SF375
EnsemblPlantsGene:SORBI_3001G324100SUPFAM:SSF51197UniParc:UPI000B425613SEG:seg::
Description
hypothetical protein
Coordinates
chr1:-:61144475..61146133
Molecular Weight (calculated)
39903.6 Da
IEP (calculated)
4.777
GRAVY (calculated)
-0.194
Length
359 amino acids
Sequence
(BLAST)
001: MAEARNYDSI VNRNEITDAA ASAFANPEQI PEKYVRTEEV LDGVVVGEDE RYELPVVDMA RLLDPELSAS EIAKLGDACR NWGFFQLTNH GVDEEVVQRM
101: KDSTVQFFSL PLESKAKVAV RGNGFEGFGH HYSRASSGKL DWAESMILVT QPVHDRNMEM WPTNPPTFRD ALEVYSVEMI DLAMKLLGFM AADLGVEQEA
201: LLDAFTGKRQ SMAIHSYPPC RHREKVMGIT PHTDGLGLTL LLHVDDTPGL QIRKDGRWFP VRPLPGAFVV NVADILDVLT NGAYASVEHR VLPDAERGRT
301: TVVIFQEASV GGLVAPLPGL LLEEGGAHAR YRSIEIEEYI KGNFNALEHG TRFIESLRI
Best Arabidopsis Sequence Match ( AT1G17010.1 )
(BLAST)
001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.