Factsheet for GSMUA_Achr11P04500_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	90.99	91.24
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	90.42	90.42
GSMUA_Achr11P...	Banana	cytosol	89.01	88.76
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	88.45	88.45
GSMUA_AchrUn_...	Banana	cytosol, peroxisome	69.58	86.97
GSMUA_Achr11P...	Banana	cytosol	62.54	86.38
GSMUA_AchrUn_...	Banana	cytosol, peroxisome	51.83	85.98
GSMUA_Achr5P20940_001	Banana	cytosol	66.48	65.74
VIT_02s0012g00320.t01	Wine grape	cytosol	41.69	54.21
GSMUA_Achr11P...	Banana	plastid	52.11	53.78
EER91934	Sorghum	cytosol	54.37	53.76
Zm00001d040597_P001	Maize	cytosol	52.96	52.81
Os10t0558900-01	Rice	cytosol	41.13	52.52
VIT_02s0012g00450.t01	Wine grape	cytosol, nucleus, peroxisome	52.11	52.41
EER91935	Sorghum	cytosol	52.96	52.22
HORVU1Hr1G056210.5	Barley	cytosol	52.11	52.11
Zm00001d029218_P001	Maize	cytosol, peroxisome, plastid	45.07	51.95
VIT_02s0012g00390.t01	Wine grape	cytosol	51.55	51.84
TraesCS1D01G222800.1	Wheat	cytosol	51.55	51.69
Os10t0559500-01	Rice	cytosol	52.39	51.67
OQU92563	Sorghum	cytosol	54.08	51.61
TraesCS1A01G221200.1	Wheat	cytosol	51.27	51.41
Os10t0558200-00	Rice	cytosol	50.42	51.14
Os10t0558750-01	Rice	cytosol, nucleus, peroxisome	40.0	50.9
Os10t0558700-02	Rice	cytosol, nucleus, peroxisome	50.99	50.7
VIT_02s0012g00400.t01	Wine grape	cytosol, peroxisome, plastid	49.3	50.58
EES02838	Sorghum	cytosol	50.14	50.42
VIT_02s0012g00360.t01	Wine grape	cytosol	47.32	50.0
TraesCS1B01G234500.1	Wheat	plastid	36.62	49.24
VIT_02s0012g00440.t01	Wine grape	extracellular	18.03	48.85
Bra026693.1-P	Field mustard	cytosol	48.45	48.04
VIT_02s0012g00350.t01	Wine grape	cytosol	46.76	47.98
EES02842	Sorghum	cytosol	51.83	47.79
KRH27437	Soybean	cytosol	48.17	47.77
KXG32356	Sorghum	plastid	45.92	46.97
Os10t0558400-00	Rice	cytosol, peroxisome	52.39	46.85
KRH21858	Soybean	cytosol	46.48	46.22
Solyc02g071430.2.1	Tomato	cytosol	47.04	45.88
AT1G17020.1	Thale cress	cytosol	45.92	45.53
KRH13456	Soybean	cytosol	45.07	45.33
Bra010470.1-P	Field mustard	cytosol	33.8	44.94
AT1G17010.1	Thale cress	cytosol	45.63	44.88
KRH58590	Soybean	cytosol	45.35	44.85
KRH75184	Soybean	cytosol	31.27	44.58
KRH75001	Soybean	cytosol	43.94	44.57
VIT_02s0012g00380.t01	Wine grape	cytosol	33.52	44.57
KRH71023	Soybean	cytosol	44.79	44.41
KRH42495	Soybean	cytosol	44.51	44.38
KRH71025	Soybean	cytosol	44.51	44.38
TraesCS3A01G477000.2	Wheat	cytosol	43.66	44.03
PGSC0003DMT400007963	Potato	cytosol	45.07	43.72
Bra010472.1-P	Field mustard	cytosol	43.94	43.58
PGSC0003DMT400008001	Potato	cytosol	43.94	43.58
Bra035046.1-P	Field mustard	cytosol	43.66	43.3
Bra019177.1-P	Field mustard	cytosol	43.1	43.22
KRH27439	Soybean	cytosol	43.66	43.18
Bra010469.1-P	Field mustard	cytosol	42.54	43.14
PGSC0003DMT400007999	Potato	cytosol	43.1	43.1
Solyc02g071400.2.1	Tomato	cytosol	41.13	42.94
TraesCS3D01G471500.2	Wheat	cytosol	42.54	42.9
KRH71028	Soybean	cytosol	43.94	42.86
OQU92565	Sorghum	mitochondrion, plastid	33.52	42.81
AT4G25310.1	Thale cress	cytosol	42.54	42.78
VIT_02s0012g00410.t01	Wine grape	plastid	41.69	42.77
Bra026695.1-P	Field mustard	cytosol, nucleus, peroxisome	40.85	42.65
Solyc02g071440.2.1	Tomato	cytosol	41.97	42.57
PGSC0003DMT400018673	Potato	cytosol	33.52	42.5
Solyc02g071450.2.1	Tomato	cytosol	43.1	42.5
Os03t0439500-01	Rice	cytosol	44.51	42.47
AT4G25300.1	Thale cress	cytosol	42.54	42.42
Bra026008.1-P	Field mustard	cytosol, nucleus, peroxisome	41.13	42.32
Solyc02g071500.2.1	Tomato	cytosol	41.97	42.09
OQU92296	Sorghum	cytosol	42.54	42.06
Solyc02g071380.2.1	Tomato	cytosol, nucleus, peroxisome	42.54	42.06
PGSC0003DMT400007992	Potato	cytosol, nucleus, peroxisome	42.54	41.71
Zm00001d029636_P001	Maize	extracellular	42.25	41.67
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	41.41	41.64
PGSC0003DMT400007989	Potato	cytosol	42.54	41.6
Solyc02g071360.2.1	Tomato	cytosol	42.54	41.6
EES12050	Sorghum	cytosol	41.41	41.53
GSMUA_AchrUn_...	Banana	mitochondrion	72.11	41.49
KRH43438	Soybean	nucleus	31.55	41.48
Os09t0354100-00	Rice	cytosol, peroxisome	33.52	41.46
PGSC0003DMT400018663	Potato	cytosol	41.97	41.27
TraesCS5A01G457300.1	Wheat	cytosol	40.28	41.21
Solyc02g071410.2.1	Tomato	cytosol	41.69	41.11
TraesCS1B01G345200.1	Wheat	cytosol	41.69	41.11
AT1G78550.1	Thale cress	cytosol, nucleus, peroxisome	41.13	41.01
PGSC0003DMT400055956	Potato	cytosol	20.56	41.01
Solyc08g062370.2.1	Tomato	cytoskeleton, cytosol, peroxisome	20.56	41.01
TraesCS5D01G468100.1	Wheat	cytosol	40.85	40.96
Solyc02g071490.2.1	Tomato	cytosol	41.41	40.72
TraesCS1A01G331300.1	Wheat	cytosol	40.28	40.51
Solyc02g071480.2.1	Tomato	cytosol, nucleus, peroxisome	38.87	40.35
Solyc02g071470.2.1	Tomato	cytosol	40.85	40.28
GSMUA_Achr11P...	Banana	cytosol	37.18	39.88
PGSC0003DMT400018670	Potato	cytosol	39.15	39.83
PGSC0003DMT400007990	Potato	nucleus	23.94	39.35
KRH49750	Soybean	cytosol	38.87	39.32
TraesCS5B01G466400.1	Wheat	cytosol	39.15	39.27
TraesCS3B01G520100.3	Wheat	cytosol	42.82	39.18
KRG89246	Soybean	cytosol	39.72	39.06
KRH58593	Soybean	cytosol, peroxisome, plastid	39.44	38.57
KRG89247	Soybean	cytosol, peroxisome, plastid	25.63	38.56
KRH11118	Soybean	cytosol, nucleus, peroxisome, plastid	40.28	38.44
KRH49748	Soybean	cytosol	39.44	38.25
KXG19500	Sorghum	cytosol, endoplasmic reticulum, peroxisome	47.32	37.67
TraesCS1A01G331400.1	Wheat	cytosol, peroxisome, plastid	40.28	36.86
KRH21128	Soybean	cytosol	28.45	36.73
TraesCS1D01G333300.1	Wheat	cytosol	33.8	36.59
HORVU3Hr1G104290.2	Barley	plastid	43.66	36.38
PGSC0003DMT400059406	Potato	peroxisome	24.23	35.25
KXG39676	Sorghum	cytosol, endoplasmic reticulum, peroxisome	39.44	35.0
HORVU1Hr1G077370.1	Barley	plastid	40.56	34.12
Os09t0353700-00	Rice	cytosol, peroxisome, plastid	35.77	31.28
Bra013884.1-P	Field mustard	cytosol	38.31	30.98

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr11G04500_001
EnsemblPlants:GSMUA_Achr11P04500_001	EnsemblPlants:GSMUA_Achr11T04500_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0RPD0
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF360
SUPFAM:SSF51197	UniParc:UPI000296D899	:	:	:	:

Description

S-norcoclaurine synthase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr11G04500_001]

Coordinates

chr11:-:3369025..3370452

Molecular Weight (calculated)

39613.8 Da

IEP (calculated)

6.114

GRAVY (calculated)

-0.181

Length

355 amino acids

Sequence
(BLAST)

001: MATPSFQRLG TSIDVPNVQA LAASIANPAD VPPRYVRPEA KADPVVSDGD SELPVIDFSR LLHRRFSREE SAKLHHACAD WGFFQLINHG VPDQAMEKMK
101: ADIVEFFKLP LEQKKAFAQL PNSLEGYGQI FVVSDDQELD WADIMYLITR PLQSRNIDLW PAQPLTFRDS LSCYSMELKG VAGTLLEVMA KNLGVAPEEF
201: STIFQDQPQG VRINYYPPCP RADEVLGISP HTDGSGLTLL LQVNDVVGLQ IRKGGNWFPV KPLPGALIAN IGDIIEILSN GVYKSVEHRA IINAKKERHS
301: IATFHGPRED LMVGPLSEIV KECKPKYVSM SYKEFMKTYF SAKLEGRSLM ESLKL

Best Arabidopsis Sequence Match ( AT1G17020.1 )
(BLAST)

001: MEAKGAAQWS SILVPSVQEM VKEKTITTVP PRYVRSDQDK TEVDDDFDVK IEIPIIDMKR LCSSTTMDSE VEKLDFACKE WGFFQLVNHG IDSSFLDKVK
101: SEIQDFFNLP MEEKKKFWQR PDEIEGFGQA FVVSEDQKLD WADLFFHTVQ PVELRKPHLF PKLPLPFRDT LEMYSSEVQS VAKILIAKMA RALEIKPEEL
201: EKLFDDVDSV QSMRMNYYPP CPQPDQVIGL TPHSDSVGLT VLMQVNDVEG LQIKKDGKWV PVKPLPNAFI VNIGDVLEII TNGTYRSIEH RGVVNSEKER
301: LSIATFHNVG MYKEVGPAKS LVERQKVARF KRLTMKEYND GLFSRTLDGK AYLDALRI

Arabidopsis Description

SRG1Protein SRG1 [Source:UniProtKB/Swiss-Prot;Acc:Q39224]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.