Factsheet for GSMUA_AchrUn_randomP26440_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol, peroxisome	65.14	86.45
GSMUA_Achr11P...	Banana	cytosol	78.17	86.38
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	90.85	72.88
GSMUA_Achr11P...	Banana	cytosol	89.08	71.07
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	87.68	70.14
GSMUA_Achr11P...	Banana	cytosol	86.97	69.58
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	84.86	67.89
Os10t0558900-01	Rice	cytosol	51.41	52.52
GSMUA_Achr5P20940_001	Banana	cytosol	63.38	50.14
VIT_02s0012g00440.t01	Wine grape	extracellular	22.18	48.09
Zm00001d029218_P001	Maize	cytosol, peroxisome, plastid	52.11	48.05
VIT_02s0012g00320.t01	Wine grape	cytosol	45.42	47.25
TraesCS1B01G234500.1	Wheat	plastid	42.61	45.83
VIT_02s0012g00450.t01	Wine grape	cytosol, nucleus, peroxisome	56.69	45.61
Bra010470.1-P	Field mustard	cytosol	41.9	44.57
VIT_02s0012g00390.t01	Wine grape	cytosol	54.93	44.19
GSMUA_Achr11P...	Banana	plastid	53.52	44.19
VIT_02s0012g00360.t01	Wine grape	cytosol	52.11	44.05
EER91934	Sorghum	cytosol	55.28	43.73
Os10t0558700-02	Rice	cytosol, nucleus, peroxisome	54.58	43.42
HORVU1Hr1G056210.5	Barley	cytosol	54.23	43.38
EER91935	Sorghum	cytosol	54.58	43.06
Os10t0559500-01	Rice	cytosol	54.23	42.78
Zm00001d040597_P001	Maize	cytosol	53.52	42.7
Os10t0558750-01	Rice	cytosol, nucleus, peroxisome	41.9	42.65
KRH75184	Soybean	cytosol	37.32	42.57
TraesCS1A01G221200.1	Wheat	cytosol	52.82	42.37
TraesCS1D01G222800.1	Wheat	cytosol	52.82	42.37
VIT_02s0012g00400.t01	Wine grape	cytosol, peroxisome, plastid	51.41	42.2
OQU92563	Sorghum	cytosol	54.93	41.94
Bra026693.1-P	Field mustard	cytosol	52.82	41.9
Os10t0558200-00	Rice	cytosol	51.41	41.71
VIT_02s0012g00350.t01	Wine grape	cytosol	50.7	41.62
Os09t0354100-00	Rice	cytosol, peroxisome	41.55	41.12
PGSC0003DMT400055956	Potato	cytosol	25.35	40.45
GSMUA_AchrUn_...	Banana	mitochondrion	87.32	40.19
KRH43438	Soybean	nucleus	38.03	40.0
EES02838	Sorghum	cytosol	49.65	39.94
KRH27437	Soybean	cytosol	50.0	39.66
AT1G17020.1	Thale cress	cytosol	49.65	39.39
Solyc08g062370.2.1	Tomato	cytoskeleton, cytosol, peroxisome	24.65	39.33
AT1G17010.1	Thale cress	cytosol	49.65	39.06
Os10t0558400-00	Rice	cytosol, peroxisome	54.58	39.04
KRH75001	Soybean	cytosol	47.89	38.86
Solyc02g071430.2.1	Tomato	cytosol	49.65	38.74
Bra019177.1-P	Field mustard	cytosol	48.24	38.7
AT4G25310.1	Thale cress	cytosol	47.89	38.53
GSMUA_Achr11P...	Banana	cytosol	44.72	38.37
Bra010472.1-P	Field mustard	cytosol	48.24	38.27
PGSC0003DMT400007963	Potato	cytosol	49.3	38.25
KRH42495	Soybean	cytosol	47.89	38.2
KRH71025	Soybean	cytosol	47.89	38.2
KRG89247	Soybean	cytosol, peroxisome, plastid	31.69	38.14
KRH21858	Soybean	cytosol	47.89	38.1
Bra035046.1-P	Field mustard	cytosol	47.89	37.99
KRH13456	Soybean	cytosol	47.18	37.96
EES02842	Sorghum	cytosol	51.41	37.92
AT4G25300.1	Thale cress	cytosol	47.54	37.92
KRH58590	Soybean	cytosol	47.89	37.88
Bra026695.1-P	Field mustard	cytosol, nucleus, peroxisome	45.07	37.65
KRH71028	Soybean	cytosol	48.24	37.64
KXG32356	Sorghum	plastid	45.77	37.46
KRH27439	Soybean	cytosol	47.18	37.33
KRH71023	Soybean	cytosol	46.83	37.15
Bra026008.1-P	Field mustard	cytosol, nucleus, peroxisome	45.07	37.1
PGSC0003DMT400007999	Potato	cytosol	46.13	36.9
Bra010469.1-P	Field mustard	cytosol	45.42	36.86
Solyc02g071440.2.1	Tomato	cytosol	45.42	36.86
VIT_02s0012g00410.t01	Wine grape	plastid	44.72	36.71
PGSC0003DMT400059406	Potato	peroxisome	31.34	36.48
TraesCS3A01G477000.2	Wheat	cytosol	45.07	36.36
Solyc02g071450.2.1	Tomato	cytosol	45.77	36.11
Solyc02g071360.2.1	Tomato	cytosol	46.13	36.09
PGSC0003DMT400008001	Potato	cytosol	45.42	36.03
AT1G78550.1	Thale cress	cytosol, nucleus, peroxisome	45.07	35.96
Solyc02g071380.2.1	Tomato	cytosol, nucleus, peroxisome	45.42	35.93
Solyc02g071400.2.1	Tomato	cytosol	42.96	35.88
Solyc02g071410.2.1	Tomato	cytosol	45.42	35.83
PGSC0003DMT400007989	Potato	cytosol	45.77	35.81
PGSC0003DMT400018663	Potato	cytosol	45.42	35.73
Solyc02g071490.2.1	Tomato	cytosol	45.42	35.73
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	44.37	35.69
TraesCS3D01G471500.2	Wheat	cytosol	44.01	35.51
Solyc02g071500.2.1	Tomato	cytosol	44.01	35.31
OQU92565	Sorghum	mitochondrion, plastid	34.51	35.25
PGSC0003DMT400007992	Potato	cytosol, nucleus, peroxisome	44.72	35.08
EES12050	Sorghum	cytosol	43.66	35.03
TraesCS5A01G457300.1	Wheat	cytosol	42.61	34.87
VIT_02s0012g00380.t01	Wine grape	cytosol	32.75	34.83
KRH49750	Soybean	cytosol	42.96	34.76
TraesCS1B01G345200.1	Wheat	cytosol	44.01	34.72
KRH58593	Soybean	cytosol, peroxisome, plastid	44.37	34.71
PGSC0003DMT400018670	Potato	cytosol	42.61	34.67
PGSC0003DMT400018673	Potato	cytosol	34.15	34.64
Solyc02g071470.2.1	Tomato	cytosol	43.66	34.44
KRH11118	Soybean	cytosol, nucleus, peroxisome, plastid	45.07	34.41
Solyc02g071480.2.1	Tomato	cytosol, nucleus, peroxisome	41.2	34.21
TraesCS1A01G331300.1	Wheat	cytosol	42.25	33.99
OQU92296	Sorghum	cytosol	42.96	33.98
TraesCS5D01G468100.1	Wheat	cytosol	42.25	33.9
Zm00001d029636_P001	Maize	extracellular	42.61	33.61
Os03t0439500-01	Rice	cytosol	44.01	33.6
KRG89246	Soybean	cytosol	42.25	33.24
KRH21128	Soybean	cytosol	32.04	33.09
TraesCS5B01G466400.1	Wheat	cytosol	40.49	32.49
TraesCS3B01G520100.3	Wheat	cytosol	44.37	32.47
KRH49748	Soybean	cytosol	41.2	31.97
KXG19500	Sorghum	cytosol, endoplasmic reticulum, peroxisome	48.94	31.17
PGSC0003DMT400007990	Potato	nucleus	23.59	31.02
TraesCS1A01G331400.1	Wheat	cytosol, peroxisome, plastid	42.25	30.93
HORVU3Hr1G104290.2	Barley	plastid	45.07	30.05
TraesCS1D01G333300.1	Wheat	cytosol	34.51	29.88
KXG39676	Sorghum	cytosol, endoplasmic reticulum, peroxisome	41.9	29.75
Bra013884.1-P	Field mustard	cytosol	45.77	29.61
Os09t0353700-00	Rice	cytosol, peroxisome, plastid	42.25	29.56
HORVU1Hr1G077370.1	Barley	plastid	43.31	29.15

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_AchrUn_randomG26440_001
EnsemblPlants:GSMUA_AchrUn_randomP26440_001	EnsemblPlants:GSMUA_AchrUn_randomT26440_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0UCK2
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF360
SUPFAM:SSF51197	UniParc:UPI0002959360	:	:	:	:

Description

Putative Protein SRG1 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG26440_001]

Coordinates

chrchrUn_random:+:129722409..129723739

Molecular Weight (calculated)

31806.7 Da

IEP (calculated)

7.973

GRAVY (calculated)

-0.096

Length

284 amino acids

Sequence
(BLAST)

001: AKLHHACADW GFFQLINHGV PDQVMEKMKA DIVEFFKLPL EEKKAFARLP NSLEGYGQAF VVSDDQQLDW ADMLTLITRP LQSRNIDLWP AQPLTFRDSL
101: SCYSMELKSV AGTLLEVMAK NLGVAPEEFS TIFQDQTQAV RINYYPPCPR ADEVLGLSPH TDGSGLTLLL QVNDVEGLQI RKGGNWFPVK QLPGALIANI
201: GDIIEILSNG VYKSIEHRTI INAKEKRLSI ATFHGPIEYS VIGPLAEIVK GCKPKYVSMS FGKFMKAYFS AELKGKRFMK NLKL

Best Arabidopsis Sequence Match ( AT1G17010.1 )
(BLAST)

001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.