Factsheet for GSMUA_Achr11P05730_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	72.21	67.71
Solyc01g067620.2.1	Tomato	nucleus	65.26	59.5
PGSC0003DMT400027666	Potato	cytosol, nucleus, peroxisome	65.26	59.5
VIT_05s0020g01310.t01	Wine grape	cytosol	65.56	59.45
Zm00001d042192_P001	Maize	extracellular	63.44	57.38
Os01t0935400-00	Rice	cytosol	63.14	57.1
TraesCS3D01G450500.1	Wheat	cytosol	63.44	56.91
TraesCS3A01G457700.1	Wheat	cytosol	63.44	56.76
KRH37129	Soybean	cytosol	62.54	56.71
TraesCS3B01G497900.1	Wheat	cytosol	63.44	56.6
EES04177	Sorghum	cytosol	63.14	56.49
KRH12130	Soybean	cytosol	62.24	56.44
Bra023884.1-P	Field mustard	cytosol, nucleus, peroxisome	61.33	55.92
Bra031281.1-P	Field mustard	cytosol	61.33	55.92
CDY44337	Canola	cytosol	61.33	55.92
CDY38615	Canola	cytosol	61.33	55.92
AT3G21420.1	Thale cress	cytosol	61.33	55.77
CDY37294	Canola	cytosol, nucleus, peroxisome	61.03	55.65
CDY19267	Canola	cytosol	60.73	55.37
KRH02234	Soybean	cytosol	54.08	49.72
HORVU3Hr1G098580.2	Barley	plastid	63.75	46.07
GSMUA_AchrUn_...	Banana	cytosol, peroxisome	38.37	44.72
GSMUA_AchrUn_...	Banana	cytosol, peroxisome	27.49	42.52
GSMUA_Achr11P...	Banana	cytosol	31.72	40.86
GSMUA_Achr5P20940_001	Banana	cytosol	42.3	39.0
GSMUA_Achr11P...	Banana	cytosol	41.09	38.2
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	40.79	38.14
GSMUA_Achr11P...	Banana	cytosol	39.88	37.18
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	39.88	37.18
GSMUA_Achr11P...	Banana	plastid	37.76	36.34
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	37.76	35.21
GSMUA_AchrUn_...	Banana	mitochondrion	38.37	20.58

Protein Annotations

MapMan:11.9.1.5	Gene3D:2.60.120.330	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr11G05730_001
EnsemblPlants:GSMUA_Achr11P05730_001	EnsemblPlants:GSMUA_Achr11T05730_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0RPQ3
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF169
SUPFAM:SSF51197	UniParc:UPI000295AC36	SEG:seg	:	:	:

Description

Putative Protein SRG1 [Source:GMGC_GENE;Acc:GSMUA_Achr11G05730_001]

Coordinates

chr11:-:4268561..4271251

Molecular Weight (calculated)

37508.6 Da

IEP (calculated)

6.715

GRAVY (calculated)

-0.176

Length

331 amino acids

Sequence
(BLAST)

001: MLMGRKLSSL LKTPERESEM AKLAAACEGW GFFQVINHGV EHELLEKMEK LAKEFFMLPL EEKEKYPMPP GGIQGYGHAF VFSEQQKLDW CNMFALGLAP
101: AFMRKPELWP TNPPSFSETL EKYSNSIRLL CETLLGFIAE SLGLRRSFFN EMFGEAVQAV RMNYYPPCSR PDLVLGLTPH SDGSALTVLQ QETASVGLQI
201: LKDGAWLPVH PIANALVVNV GDTLEVLTNG KYKSVEHRAV TNRESDRLSM VTFYAPSYEI ELGPVPELVN DKACLYRRYN HGEYSRLYIT NKLEGKKRLE
301: FAKIQTNRID LTILFPVTLE VCRHPISQLA I

Best Arabidopsis Sequence Match ( AT3G21420.1 )
(BLAST)

001: MAPLPISSIR VGKIDDVQEL IKSKPNKVPE RFIREEYERG VVVSSLKTHH LHHQIPVIDL SKLSKPDNDD FFFEILKLSQ ACEDWGFFQV INHGIEVEVV
101: EDIEEVASEF FDMPLEEKKK YPMEPGTVQG YGQAFIFSED QKLDWCNMFA LGVHPPQIRN PKLWPSKPAR FSESLEGYSK EIRELCKRLL KYIAISLGLK
201: EERFEEMFGE AVQAVRMNYY PPCSSPDLVL GLSPHSDGSA LTVLQQSKNS CVGLQILKDN TWVPVKPLPN ALVINIGDTI EVLSNGKYKS VEHRAVTNRE
301: KERLTIVTFY APNYEVEIEP MSELVDDETN PCKYRSYNHG DYSYHYVSNK LQGKKSLDFA KILN

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LIF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.