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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • peroxisome 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT4G25300.1 Thale cress cytosol 85.84 85.11
CDY52350 Canola cytosol 60.06 79.4
CDX94459 Canola cytosol 55.24 78.95
Bra010470.1-P Field mustard cytosol 59.49 78.65
CDY24860 Canola cytosol 59.49 78.65
CDY08973 Canola cytosol 59.21 78.28
CDY08970 Canola cytosol 79.32 78.21
CDX92691 Canola cytosol 32.29 78.08
CDY24858 Canola cytosol, peroxisome, plastid 79.04 77.93
Bra010472.1-P Field mustard cytosol 78.47 77.37
CDX89424 Canola cytosol 62.61 76.21
Bra010469.1-P Field mustard cytosol 75.07 75.71
Bra019177.1-P Field mustard cytosol 75.92 75.71
CDY11068 Canola cytosol 75.92 75.71
AT1G17020.1 Thale cress cytosol 75.64 74.58
CDX92689 Canola cytosol 73.94 72.7
AT1G17010.1 Thale cress cytosol 73.09 71.47
AT1G78550.1 Thale cress cytosol, nucleus, peroxisome 65.72 65.17
CDX89425 Canola cytosol, peroxisome, plastid 35.98 61.95
KRH21858 Soybean cytosol 58.36 57.7
KRH13456 Soybean cytosol 56.94 56.94
KRH27439 Soybean cytosol 57.51 56.55
KRH27437 Soybean cytosol 57.22 56.42
VIT_15s0021g00950.t01 Wine grape cytosol 55.52 56.32
VIT_15s0021g00960.t01 Wine grape cytosol 57.79 56.04
VIT_10s0003g02450.t01 Wine grape cytosol 57.22 55.19
VIT_10s0003g02470.t01 Wine grape cytosol, mitochondrion, peroxisome, plastid 33.43 55.14
Bra013884.1-P Field mustard cytosol 65.72 52.85
GSMUA_AchrUn_... Banana cytosol, peroxisome 38.53 47.89
GSMUA_AchrUn_... Banana cytosol, peroxisome 28.9 47.66
GSMUA_Achr5P20940_001 Banana cytosol 47.88 47.08
TraesCS3D01G013500.1 Wheat mitochondrion 22.38 46.75
TraesCS4B01G374300.1 Wheat cytosol 45.89 46.42
TraesCS5A01G539800.1 Wheat cytosol 45.04 45.69
TraesCS4D01G363100.1 Wheat cytosol 45.04 45.56
GSMUA_Achr11P... Banana cytosol 33.14 45.53
TraesCS4D01G363200.1 Wheat cytosol 44.76 45.4
TraesCS4B01G374200.1 Wheat cytosol 44.48 45.11
TraesCS4D01G363000.1 Wheat cytosol 45.61 44.97
TraesCS5A01G539900.1 Wheat cytosol 40.51 44.97
Os01t0351800-01 Rice cytosol 43.63 44.77
TraesCS5A01G539700.2 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole 43.63 44.77
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 44.76 44.63
GSMUA_Achr11P... Banana plastid 43.34 44.48
Zm00001d048547_P001 Maize cytosol, peroxisome, plastid 44.76 44.26
Os10t0558750-01 Rice cytosol, nucleus, peroxisome 34.84 44.09
TraesCS4D01G363300.1 Wheat cytosol 42.49 43.99
HORVU4Hr1G088340.42 Barley cytosol 46.18 43.82
TraesCS3B01G440500.1 Wheat cytosol 45.61 43.63
GSMUA_Achr11P... Banana cytosol, peroxisome, plastid 43.63 43.38
TraesCS1A01G221200.1 Wheat cytosol 43.34 43.22
TraesCS3D01G529900.1 Wheat cytosol 42.78 43.02
GSMUA_Achr11P... Banana cytosol 43.34 42.98
Zm00001d040597_P001 Maize cytosol 43.34 42.98
TraesCS1D01G222800.1 Wheat cytosol 43.06 42.94
TraesCS3A01G407800.1 Wheat cytosol 44.76 42.82
EER95699 Sorghum cytosol 43.06 42.82
Os10t0558900-01 Rice cytosol 33.71 42.81
EER91934 Sorghum cytosol 43.34 42.62
KXG37089 Sorghum cytosol 43.34 42.62
TraesCS3D01G403000.1 Wheat cytosol 44.48 42.55
GSMUA_Achr11P... Banana cytosol 42.78 42.54
TraesCS3A01G407900.1 Wheat cytosol 44.19 42.39
Os10t0559500-01 Rice cytosol 43.06 42.22
HORVU2Hr1G010950.3 Barley cytoskeleton, cytosol, peroxisome 43.06 42.11
TraesCS2D01G063800.1 Wheat cytoskeleton, cytosol, peroxisome 43.63 42.08
TraesCS2D01G064000.1 Wheat cytosol 32.29 42.07
TraesCS1B01G234500.1 Wheat plastid 31.44 42.05
Os01t0352100-01 Rice cytosol 41.64 42.0
HORVU1Hr1G056210.5 Barley cytosol 42.21 41.97
HORVU3Hr1G091210.2 Barley cytosol 44.19 41.94
TraesCS3A01G524700.1 Wheat cytosol 41.64 41.88
EES08209 Sorghum cytosol 43.34 41.8
TraesCS2B01G077800.1 Wheat cytosol 43.34 41.8
TraesCS2D01G063700.1 Wheat cytoskeleton, cytosol, peroxisome 43.06 41.76
KXG37090 Sorghum cytosol 42.78 41.71
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 41.93 41.69
EES15940 Sorghum cytosol 42.21 41.62
TraesCS2B01G077500.1 Wheat cytoskeleton, cytosol, peroxisome 42.78 41.6
TraesCS2D01G064100.1 Wheat cytosol 43.06 41.53
KXG34760 Sorghum cytosol 42.21 41.5
Zm00001d041086_P001 Maize cytosol 41.93 41.46
EER91935 Sorghum cytosol 42.21 41.39
TraesCS2A01G065800.1 Wheat cytosol 42.78 41.26
TraesCS3B01G592000.1 Wheat cytosol 44.19 41.16
Os10t0558200-00 Rice cytosol 40.79 41.14
HORVU2Hr1G010930.2 Barley cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 41.93 41.0
TraesCS2A01G065600.1 Wheat cytoskeleton, cytosol, peroxisome 42.49 40.98
Zm00001d012819_P001 Maize cytosol 42.21 40.93
Os10t0558700-02 Rice cytosol, nucleus, peroxisome 41.36 40.9
TraesCS2A01G065500.1 Wheat cytosol 42.49 40.87
TraesCSU01G044600.1 Wheat mitochondrion 23.8 40.78
TraesCS2D01G063600.1 Wheat cytosol 42.21 40.6
TraesCS2B01G077600.1 Wheat cytosol 42.21 40.49
TraesCS2D01G063400.1 Wheat cytosol 42.21 40.49
AT3G21420.1 Thale cress cytosol 41.64 40.38
Zm00001d029218_P001 Maize cytosol, peroxisome, plastid 35.13 40.26
Os03t0856000-01 Rice cytosol 41.08 40.06
TraesCS4B01G335300.2 Wheat cytosol 41.08 39.94
HORVU2Hr1G010960.1 Barley cytosol, mitochondrion, peroxisome 40.51 39.94
KXG32356 Sorghum plastid 39.09 39.77
TraesCS2A01G065300.1 Wheat cytosol 41.36 39.67
TraesCS2A01G065400.1 Wheat cytosol 41.36 39.67
TraesCS2D01G063500.1 Wheat cytosol 41.36 39.67
HORVU4Hr1G080610.2 Barley cytosol 40.79 39.67
EES02838 Sorghum cytosol 39.38 39.38
TraesCSU01G175100.1 Wheat cytosol 35.69 38.89
TraesCS3A01G477000.2 Wheat cytosol 38.24 38.35
TraesCS3D01G471500.2 Wheat cytosol 38.24 38.35
TraesCS4B01G374100.2 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 43.06 37.81
EES02842 Sorghum cytosol 41.08 37.66
Os09t0354100-00 Rice cytosol, peroxisome 30.59 37.63
TraesCS4D01G330600.1 Wheat cytosol 38.53 37.36
Os10t0558400-00 Rice cytosol, peroxisome 41.64 37.03
OQU92563 Sorghum cytosol 38.53 36.56
OQU92296 Sorghum cytosol 37.11 36.49
TraesCS1A01G331300.1 Wheat cytosol 36.26 36.26
AT5G20400.1 Thale cress cytosol 35.69 36.21
Os03t0439500-01 Rice cytosol 37.96 36.02
TraesCS5D01G468100.1 Wheat cytosol 35.98 35.88
AT1G49390.1 Thale cress cytosol 35.13 35.63
TraesCS5B01G466400.1 Wheat cytosol 35.41 35.31
TraesCS1B01G345200.1 Wheat cytosol 35.98 35.28
TraesCS5A01G457300.1 Wheat cytosol 34.56 35.16
Zm00001d029636_P001 Maize extracellular 35.69 35.0
EES12050 Sorghum cytosol 34.84 34.75
AT5G20550.1 Thale cress cytosol 34.28 34.67
TraesCS3B01G520100.3 Wheat cytosol 37.96 34.54
AT5G54000.2 Thale cress cytosol 33.71 34.1
TraesCS1A01G331400.1 Wheat cytosol, peroxisome, plastid 37.11 33.76
OQU92565 Sorghum mitochondrion, plastid 25.78 32.73
KXG39676 Sorghum cytosol, endoplasmic reticulum, peroxisome 35.98 31.75
HORVU3Hr1G104290.2 Barley plastid 38.24 31.69
KXG19500 Sorghum cytosol, endoplasmic reticulum, peroxisome 38.81 30.72
HORVU1Hr1G077370.1 Barley plastid 36.54 30.57
TraesCS1D01G333300.1 Wheat cytosol 28.05 30.18
Os09t0353700-00 Rice cytosol, peroxisome, plastid 32.86 28.57
Zm00001d041087_P001 Maize cytosol 37.11 27.41
GSMUA_AchrUn_... Banana mitochondrion 37.11 21.23
Protein Annotations
Gene3D:2.60.120.330MapMan:50.1.13EntrezGene:828634ProteinID:AEE85038.1ArrayExpress:AT4G25310EnsemblPlantsGene:AT4G25310
RefSeq:AT4G25310TAIR:AT4G25310RefSeq:AT4G25310-TAIR-GEnsemblPlants:AT4G25310.1TAIR:AT4G25310.1EMBL:BT011229
EMBL:BT012157ProteinID:CAA23072.1ProteinID:CAB81342.1InterPro:DIOX_NGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0055114
InterPro:IPNS-likeInterPro:IPR005123InterPro:IPR027443RefSeq:NP_194261.1InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171
PFAM:PF14226PFscan:PS51471PANTHER:PTHR10209PANTHER:PTHR10209:SF168UniProt:Q9SB32SUPFAM:SSF51197
UniParc:UPI00000489E6SEG:seg::::
Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SB32]
Coordinates
chr4:+:12949664..12951937
Molecular Weight (calculated)
39935.2 Da
IEP (calculated)
5.199
GRAVY (calculated)
-0.283
Length
353 amino acids
Sequence
(BLAST)
001: MEGKGVTFSS VIVPSVQEMV KEKVITTVLP PRYVRSDQEK GEAAIDSGEN QIPIIDMSLL SSSTSMDSEI DKLDFACKEW GFFQLVNHGM DLDKFKSDIQ
101: DFFNLPMEEK KKLWQQPGDI EGFGQAFVFS EEQKLDWADV FFLTMQPVPL RKPHLFPKLP LPFRDTLDTY SAELKSIAKV LFAKLASALK IKPEEMEKLF
201: DDELGQRIRM NYYPPCPEPD KAIGLTPHSD ATGLTILLQV NEVEGLQIKK DGKWVSVKPL PNALVVNVGD ILEIITNGTY RSIEHRGVVN SEKERLSVAS
301: FHNTGFGKEI GPMRSLVERH KGALFKTLTT EEYFHGLFSR ELDGKAYLDV MRI
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.