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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • peroxisome 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d041086_P001 Maize cytosol 90.5 90.76
KXG34760 Sorghum cytosol 64.8 64.62
TraesCS2A01G065500.1 Wheat cytosol 65.08 63.49
TraesCS2D01G063600.1 Wheat cytosol 65.08 63.49
HORVU2Hr1G010930.2 Barley cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 63.41 62.88
TraesCS2D01G064000.1 Wheat cytosol 47.49 62.73
TraesCS2D01G063800.1 Wheat cytoskeleton, cytosol, peroxisome 63.97 62.57
HORVU2Hr1G010960.1 Barley cytosol, mitochondrion, peroxisome 62.29 62.29
TraesCS2B01G077600.1 Wheat cytosol 63.69 61.96
TraesCS2D01G063400.1 Wheat cytosol 63.41 61.68
TraesCS2A01G065400.1 Wheat cytosol 63.13 61.41
TraesCS2D01G063500.1 Wheat cytosol 63.13 61.41
HORVU2Hr1G010950.3 Barley cytoskeleton, cytosol, peroxisome 61.45 60.94
TraesCS2A01G065600.1 Wheat cytoskeleton, cytosol, peroxisome 62.29 60.93
TraesCS2A01G065300.1 Wheat cytosol 62.29 60.6
TraesCS2A01G065800.1 Wheat cytosol 61.73 60.38
TraesCS2D01G064100.1 Wheat cytosol 61.45 60.11
TraesCS2D01G063700.1 Wheat cytoskeleton, cytosol, peroxisome 60.61 59.62
TraesCS2B01G077500.1 Wheat cytoskeleton, cytosol, peroxisome 60.34 59.5
TraesCS2B01G077800.1 Wheat cytosol 60.61 59.29
Zm00001d041087_P001 Maize cytosol 78.77 59.0
KXG37090 Sorghum cytosol 47.77 47.24
KXG37089 Sorghum cytosol 46.65 46.52
EES08209 Sorghum cytosol 47.21 46.17
VIT_02s0012g00450.t01 Wine grape cytosol, nucleus, peroxisome 44.69 45.33
VIT_02s0012g00390.t01 Wine grape cytosol 44.13 44.76
KRH75184 Soybean cytosol 31.01 44.58
Bra010470.1-P Field mustard cytosol 33.24 44.57
VIT_02s0012g00320.t01 Wine grape cytosol 33.8 44.32
KRH58590 Soybean cytosol 43.85 43.73
KRH75001 Soybean cytosol 42.46 43.43
KRH27439 Soybean cytosol 43.02 42.9
KRH42495 Soybean cytosol 42.46 42.7
KRH71028 Soybean cytosol 43.3 42.58
KRH21858 Soybean cytosol 42.46 42.58
KRH13456 Soybean cytosol 41.9 42.49
VIT_02s0012g00400.t01 Wine grape cytosol, peroxisome, plastid 41.06 42.49
Bra019177.1-P Field mustard cytosol 41.9 42.37
AT4G25310.1 Thale cress cytosol 41.62 42.21
Bra026693.1-P Field mustard cytosol 42.18 42.18
VIT_02s0012g00440.t01 Wine grape extracellular 15.36 41.98
VIT_02s0012g00360.t01 Wine grape cytosol 39.39 41.96
EER91935 Sorghum cytosol 42.18 41.94
KRH27437 Soybean cytosol 41.9 41.9
AT4G25300.1 Thale cress cytosol 41.06 41.29
EER95699 Sorghum cytosol 40.78 41.13
AT1G17020.1 Thale cress cytosol 41.06 41.06
Bra010472.1-P Field mustard cytosol 41.06 41.06
KRH71023 Soybean cytosol 41.06 41.06
Solyc02g071360.2.1 Tomato cytosol 41.34 40.77
PGSC0003DMT400007989 Potato cytosol 41.06 40.5
KRH71025 Soybean cytosol 40.22 40.45
KRG89247 Soybean cytosol, peroxisome, plastid 26.54 40.25
PGSC0003DMT400007963 Potato cytosol 41.06 40.16
VIT_02s0012g00350.t01 Wine grape cytosol 38.55 39.88
Bra010469.1-P Field mustard cytosol 38.83 39.71
AT1G17010.1 Thale cress cytosol 39.94 39.61
Solyc02g071430.2.1 Tomato cytosol 40.22 39.56
CDY69556 Canola cytosol 4.19 39.47
Solyc02g071440.2.1 Tomato cytosol 38.55 39.43
Solyc08g062370.2.1 Tomato cytoskeleton, cytosol, peroxisome 19.55 39.33
PGSC0003DMT400018663 Potato cytosol 39.39 39.06
PGSC0003DMT400007999 Potato cytosol 38.55 38.87
Bra026695.1-P Field mustard cytosol, nucleus, peroxisome 36.87 38.82
PGSC0003DMT400055956 Potato cytosol 19.27 38.76
EER91934 Sorghum cytosol 38.83 38.72
Solyc02g071380.2.1 Tomato cytosol, nucleus, peroxisome 38.83 38.72
OQU92563 Sorghum cytosol 40.22 38.71
KXG32356 Sorghum plastid 37.43 38.62
PGSC0003DMT400018673 Potato cytosol 30.17 38.57
Bra026008.1-P Field mustard cytosol, nucleus, peroxisome 37.15 38.55
EES02838 Sorghum cytosol 37.99 38.53
PGSC0003DMT400059406 Potato peroxisome 26.26 38.52
Solyc02g071490.2.1 Tomato cytosol 38.83 38.5
EES02842 Sorghum cytosol 41.34 38.44
VIT_02s0012g00410.t01 Wine grape plastid 36.87 38.15
Solyc02g071500.2.1 Tomato cytosol 37.71 38.14
KRG89246 Soybean cytosol 37.99 37.67
PGSC0003DMT400007992 Potato cytosol, nucleus, peroxisome 37.99 37.57
EES04177 Sorghum cytosol 38.83 37.57
Solyc02g071410.2.1 Tomato cytosol 37.71 37.5
Solyc02g071450.2.1 Tomato cytosol 37.71 37.5
Solyc02g071470.2.1 Tomato cytosol 37.71 37.5
PGSC0003DMT400008001 Potato cytosol 37.43 37.43
KRH49748 Soybean cytosol 37.99 37.16
Solyc02g071400.2.1 Tomato cytosol 35.2 37.06
KRH49750 Soybean cytosol 36.31 37.04
Bra035046.1-P Field mustard cytosol 36.87 36.87
VIT_02s0012g00380.t01 Wine grape cytosol 27.37 36.7
KRH11118 Soybean cytosol, nucleus, peroxisome, plastid 37.99 36.56
AT1G78550.1 Thale cress cytosol, nucleus, peroxisome 36.31 36.52
EES12050 Sorghum cytosol 36.03 36.44
PGSC0003DMT400018670 Potato cytosol 35.47 36.39
KRH21128 Soybean cytosol 27.93 36.36
Solyc02g071480.2.1 Tomato cytosol, nucleus, peroxisome 34.36 35.96
KRH43438 Soybean nucleus 27.09 35.93
KRH58593 Soybean cytosol, peroxisome, plastid 35.47 34.99
EER89306 Sorghum cytosol 34.92 34.82
OQU92296 Sorghum cytosol 34.92 34.82
OQU75951 Sorghum cytosol 32.96 34.1
KXG29110 Sorghum cytosol 34.64 34.07
PGSC0003DMT400007990 Potato nucleus 20.39 33.8
KXG19442 Sorghum cytosol 34.64 33.6
KXG39676 Sorghum cytosol, endoplasmic reticulum, peroxisome 36.31 32.5
EER87956 Sorghum peroxisome 32.12 31.68
OQU92565 Sorghum mitochondrion, plastid 24.3 31.3
KXG19500 Sorghum cytosol, endoplasmic reticulum, peroxisome 38.55 30.94
Bra013884.1-P Field mustard cytosol 37.71 30.75
EER87960 Sorghum cytosol 15.08 30.68
EER88660 Sorghum cytosol 30.73 29.97
EER87955 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 29.05 26.67
Protein Annotations
Gene3D:2.60.120.330MapMan:50.1.13EntrezGene:8061249UniProt:C5YNI2InterPro:DIOX_NEnsemblPlants:EES15940
ProteinID:EES15940ProteinID:EES15940.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150
GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0055114InterPro:IPNS-likeInterPro:IPR005123
InterPro:IPR027443InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171PFAM:PF14226PFscan:PS51471PANTHER:PTHR10209
PANTHER:PTHR10209:SF376EnsemblPlantsGene:SORBI_3008G091500SUPFAM:SSF51197UniParc:UPI0001A881EFRefSeq:XP_002442102.1:
Description
hypothetical protein
Coordinates
chr8:+:37978972..37982666
Molecular Weight (calculated)
40519.7 Da
IEP (calculated)
6.054
GRAVY (calculated)
-0.291
Length
358 amino acids
Sequence
(BLAST)
001: MASESRISQV ATTIPVRNVQ DLAACDAGGE LTSEALERYI RPDIDKDAVL YEHSGELPLV DLGRLLNPQH WEEEAAKLRY ACEEWGFFQV LSHGVPEGVM
101: LNVKRDIQEF FQLPLDVKNA YAQTPGDLQG YGQAYVVSND QKLDWADMFV IITQPPPARD MKHWPTEPLT FRKSLEDYCD ELKKVAHSIV EAIAKILNID
201: PKLTSDKYAV QVLRMNYYPP CMSMPEKVLG FSPHSDGSFL TILLQVNSVE GLQIKRHDAW IPVKPHPEAL LVNVGDFLEI MTNGKFKSIE HRVIINPRKE
301: RLSVSAFHNP KFDGVVSPVT GTPTEKLLYS TVKVEDYITH HLSNKLDGKR ALDHVKMF
Best Arabidopsis Sequence Match ( AT1G17010.1 )
(BLAST)
001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.