Factsheet for AT1G17020.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX81796	Canola	cytosol	87.15	87.15
Bra026693.1-P	Field mustard	cytosol	86.03	86.03
CDY21769	Canola	cytosol	85.2	83.79
AT1G17010.1	Thale cress	cytosol	77.37	76.73
AT4G25310.1	Thale cress	cytosol	74.58	75.64
AT4G25300.1	Thale cress	cytosol	74.86	75.28
AT1G78550.1	Thale cress	cytosol, nucleus, peroxisome	64.8	65.17
VIT_15s0021g00960.t01	Wine grape	cytosol	61.73	60.71
VIT_15s0021g00950.t01	Wine grape	cytosol	58.94	60.63
KRH27437	Soybean	cytosol	60.61	60.61
KRH21858	Soybean	cytosol	60.34	60.5
KRH13456	Soybean	cytosol	58.94	59.77
KRH27439	Soybean	cytosol	59.5	59.33
VIT_10s0003g02470.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	33.8	56.54
VIT_10s0003g02450.t01	Wine grape	cytosol	57.26	56.01
GSMUA_AchrUn_...	Banana	cytosol, peroxisome	30.45	50.93
GSMUA_AchrUn_...	Banana	cytosol, peroxisome	39.39	49.65
TraesCS4D01G363100.1	Wheat	cytosol	46.37	47.56
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	46.65	47.18
TraesCS4B01G374300.1	Wheat	cytosol	45.53	46.7
GSMUA_Achr5P20940_001	Banana	cytosol	46.65	46.52
GSMUA_Achr11P...	Banana	cytosol, peroxisome, plastid	46.09	46.48
TraesCS3D01G013500.1	Wheat	mitochondrion	21.79	46.15
GSMUA_Achr11P...	Banana	cytosol	45.53	45.92
GSMUA_Achr11P...	Banana	cytosol	45.53	45.79
GSMUA_Achr11P...	Banana	cytosol	32.68	45.53
TraesCS4D01G363200.1	Wheat	cytosol	44.13	45.4
TraesCS5A01G539700.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	43.58	45.35
TraesCS4B01G374200.1	Wheat	cytosol	43.85	45.11
TraesCS5A01G539900.1	Wheat	cytosol	39.94	44.97
TraesCS5A01G539800.1	Wheat	cytosol	43.58	44.83
Os10t0558750-01	Rice	cytosol, nucleus, peroxisome	34.92	44.8
Os01t0351800-01	Rice	cytosol	43.02	44.77
TraesCS3A01G407800.1	Wheat	cytosol	46.09	44.72
TraesCS3B01G440500.1	Wheat	cytosol	46.09	44.72
TraesCS3D01G403000.1	Wheat	cytosol	45.81	44.44
TraesCS4D01G363300.1	Wheat	cytosol	42.18	44.28
Zm00001d048547_P001	Maize	cytosol, peroxisome, plastid	44.13	44.26
TraesCS3A01G407900.1	Wheat	cytosol	44.97	43.75
TraesCS3D01G529900.1	Wheat	cytosol	42.74	43.59
TraesCS4D01G363000.1	Wheat	cytosol	43.58	43.58
GSMUA_Achr11P...	Banana	plastid	41.62	43.31
Zm00001d040597_P001	Maize	cytosol	43.02	43.26
TraesCS1A01G221200.1	Wheat	cytosol	42.74	43.22
HORVU1Hr1G056210.5	Barley	cytosol	42.74	43.1
TraesCS1D01G222800.1	Wheat	cytosol	42.46	42.94
EER91934	Sorghum	cytosol	43.02	42.9
EER95699	Sorghum	cytosol	42.46	42.82
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	42.46	42.82
TraesCS1B01G234500.1	Wheat	plastid	31.56	42.8
HORVU3Hr1G091210.2	Barley	cytosol	44.41	42.74
HORVU4Hr1G088340.42	Barley	cytosol	44.41	42.74
KXG37089	Sorghum	cytosol	42.74	42.62
Os10t0559500-01	Rice	cytosol	42.74	42.5
TraesCS3A01G524700.1	Wheat	cytosol	41.62	42.45
EES08209	Sorghum	cytosol	43.3	42.35
Os01t0352100-01	Rice	cytosol	41.34	42.29
Os10t0558900-01	Rice	cytosol	32.68	42.09
Os10t0558200-00	Rice	cytosol	41.06	42.0
EER91935	Sorghum	cytosol	42.18	41.94
HORVU2Hr1G010950.3	Barley	cytoskeleton, cytosol, peroxisome	42.18	41.83
TraesCSU01G044600.1	Wheat	mitochondrion	24.02	41.75
TraesCS2B01G077500.1	Wheat	cytoskeleton, cytosol, peroxisome	42.18	41.6
Zm00001d029218_P001	Maize	cytosol, peroxisome, plastid	35.75	41.56
TraesCS2D01G063800.1	Wheat	cytoskeleton, cytosol, peroxisome	42.46	41.53
TraesCS2D01G063700.1	Wheat	cytoskeleton, cytosol, peroxisome	42.18	41.48
TraesCS3B01G592000.1	Wheat	cytosol	43.85	41.42
TraesCS2A01G065600.1	Wheat	cytoskeleton, cytosol, peroxisome	42.18	41.26
TraesCS2B01G077800.1	Wheat	cytosol	42.18	41.26
TraesCS2D01G064100.1	Wheat	cytosol	42.18	41.26
KXG37090	Sorghum	cytosol	41.62	41.16
Os03t0856000-01	Rice	cytosol	41.62	41.16
EES15940	Sorghum	cytosol	41.06	41.06
Zm00001d041086_P001	Maize	cytosol	40.78	40.9
HORVU2Hr1G010930.2	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	41.06	40.72
TraesCS2A01G065800.1	Wheat	cytosol	41.62	40.71
AT3G21420.1	Thale cress	cytosol	41.34	40.66
Zm00001d012819_P001	Maize	cytosol	41.34	40.66
TraesCS2A01G065500.1	Wheat	cytosol	41.62	40.6
TraesCS2D01G064000.1	Wheat	cytosol	30.73	40.59
EES02838	Sorghum	cytosol	39.94	40.51
HORVU4Hr1G080610.2	Barley	cytosol	41.06	40.5
Os10t0558700-02	Rice	cytosol, nucleus, peroxisome	40.22	40.34
TraesCS2D01G063600.1	Wheat	cytosol	41.34	40.33
TraesCS4B01G335300.2	Wheat	cytosol	40.78	40.22
KXG32356	Sorghum	plastid	38.83	40.06
KXG34760	Sorghum	cytosol	39.94	39.83
TraesCSU01G175100.1	Wheat	cytosol	36.03	39.81
Os09t0354100-00	Rice	cytosol, peroxisome	31.84	39.72
TraesCS2D01G063400.1	Wheat	cytosol	40.78	39.67
HORVU2Hr1G010960.1	Barley	cytosol, mitochondrion, peroxisome	39.11	39.11
EES02842	Sorghum	cytosol	41.9	38.96
Os03t0439500-01	Rice	cytosol	40.22	38.71
TraesCS3A01G477000.2	Wheat	cytosol	37.99	38.64
TraesCS2A01G065300.1	Wheat	cytosol	39.66	38.59
TraesCS2A01G065400.1	Wheat	cytosol	39.66	38.59
TraesCS2B01G077600.1	Wheat	cytosol	39.66	38.59
TraesCS2D01G063500.1	Wheat	cytosol	39.66	38.59
TraesCS4D01G330600.1	Wheat	cytosol	39.11	38.46
OQU92563	Sorghum	cytosol	39.94	38.44
TraesCS4B01G374100.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	43.02	38.31
TraesCS3D01G471500.2	Wheat	cytosol	37.43	38.07
OQU92296	Sorghum	cytosol	37.99	37.88
Os10t0558400-00	Rice	cytosol, peroxisome	41.9	37.78
AT5G20400.1	Thale cress	cytosol	36.03	37.07
TraesCS5D01G468100.1	Wheat	cytosol	36.59	37.01
Zm00001d029636_P001	Maize	extracellular	37.15	36.94
EES12050	Sorghum	cytosol	36.31	36.72
TraesCS1B01G345200.1	Wheat	cytosol	36.87	36.67
TraesCS1A01G331300.1	Wheat	cytosol	36.03	36.54
TraesCS5B01G466400.1	Wheat	cytosol	35.75	36.16
TraesCS5A01G457300.1	Wheat	cytosol	34.92	36.02
AT1G49390.1	Thale cress	cytosol	34.92	35.92
AT5G20550.1	Thale cress	cytosol	34.36	35.24
TraesCS3B01G520100.3	Wheat	cytosol	37.71	34.79
AT5G54000.2	Thale cress	cytosol	33.52	34.38
TraesCS1A01G331400.1	Wheat	cytosol, peroxisome, plastid	37.15	34.28
KXG39676	Sorghum	cytosol, endoplasmic reticulum, peroxisome	37.15	33.25
OQU92565	Sorghum	mitochondrion, plastid	25.7	33.09
HORVU3Hr1G104290.2	Barley	plastid	37.99	31.92
KXG19500	Sorghum	cytosol, endoplasmic reticulum, peroxisome	39.66	31.84
TraesCS1D01G333300.1	Wheat	cytosol	29.05	31.71
HORVU1Hr1G077370.1	Barley	plastid	36.87	31.28
Os09t0353700-00	Rice	cytosol, peroxisome, plastid	33.24	29.31
Zm00001d041087_P001	Maize	cytosol	36.59	27.41
GSMUA_AchrUn_...	Banana	mitochondrion	37.99	22.04

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	EntrezGene:838272	ProteinID:AAD50032.1	ProteinID:AEE29531.1	ArrayExpress:AT1G17020
EnsemblPlantsGene:AT1G17020	RefSeq:AT1G17020	TAIR:AT1G17020	RefSeq:AT1G17020-TAIR-G	EnsemblPlants:AT1G17020.1	TAIR:AT1G17020.1
EMBL:AY048302	EMBL:AY139794	Unigene:At.21208	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0010150	GO:GO:0016491
GO:GO:0016682	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443
RefSeq:NP_173145.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PO:PO:0000230	PO:PO:0000293
PO:PO:0001185	PO:PO:0007017	PO:PO:0007115	PO:PO:0007611	PO:PO:0007616	PO:PO:0009005
PO:PO:0009009	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020100	PO:PO:0025022	PO:PO:0025281	PFscan:PS51471
PANTHER:PTHR10209	PANTHER:PTHR10209:SF168	UniProt:Q39224	Symbol:SRG1	SUPFAM:SSF51197	UniParc:UPI0000048271
EMBL:X79052	SEG:seg	:	:	:	:

Description

SRG1Protein SRG1 [Source:UniProtKB/Swiss-Prot;Acc:Q39224]

Coordinates

chr1:+:5820080..5822013

Molecular Weight (calculated)

41041.4 Da

IEP (calculated)

5.110

GRAVY (calculated)

-0.355

Length

358 amino acids

Sequence
(BLAST)

001: MEAKGAAQWS SILVPSVQEM VKEKTITTVP PRYVRSDQDK TEVDDDFDVK IEIPIIDMKR LCSSTTMDSE VEKLDFACKE WGFFQLVNHG IDSSFLDKVK
101: SEIQDFFNLP MEEKKKFWQR PDEIEGFGQA FVVSEDQKLD WADLFFHTVQ PVELRKPHLF PKLPLPFRDT LEMYSSEVQS VAKILIAKMA RALEIKPEEL
201: EKLFDDVDSV QSMRMNYYPP CPQPDQVIGL TPHSDSVGLT VLMQVNDVEG LQIKKDGKWV PVKPLPNAFI VNIGDVLEII TNGTYRSIEH RGVVNSEKER
301: LSIATFHNVG MYKEVGPAKS LVERQKVARF KRLTMKEYND GLFSRTLDGK AYLDALRI

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.