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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • mitochondrion 2
  • peroxisome 1
  • cytosol 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:peroxisome
Plant-mPloc:cytosol
Predotar:secretory
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400049392 Potato cytosol 93.87 83.86
Solyc10g076840.1.1 Tomato cytosol 80.97 72.33
Bra002299.1-P Field mustard cytosol 30.0 60.78
Bra022690.1-P Field mustard cytoskeleton, cytosol, peroxisome 39.03 53.78
CDY28799 Canola cytoskeleton, cytosol, peroxisome 39.03 53.78
TraesCS7D01G046300.1 Wheat cytosol 21.29 50.77
CDY63243 Canola mitochondrion 24.19 49.67
Bra002298.1-P Field mustard cytosol 55.48 49.43
CDX92465 Canola cytosol 55.48 49.28
CDY56860 Canola cytosol 54.84 48.99
AT5G20400.1 Thale cress cytosol 54.19 48.28
AT1G49390.1 Thale cress cytosol 53.55 47.7
CDY51847 Canola cytosol 53.55 47.7
TraesCS7D01G046400.1 Wheat cytosol 26.13 47.65
Bra006559.1-P Field mustard cytosol 53.23 47.14
AT5G20550.1 Thale cress cytosol 52.9 46.99
CDY71604 Canola cytosol 52.26 46.42
VIT_11s0118g00360.t01 Wine grape cytosol 58.39 45.48
HORVU7Hr1G009200.1 Barley cytosol, peroxisome 27.42 45.45
AT5G54000.2 Thale cress cytosol 50.65 44.99
TraesCS7A01G140600.1 Wheat cytosol 34.19 44.92
Solyc06g068270.2.1 Tomato nucleus 51.29 44.79
Solyc07g045040.2.1 Tomato cytosol 50.0 44.03
TraesCS7B01G042000.1 Wheat cytosol 36.77 43.51
TraesCS1D01G319800.1 Wheat cytosol 26.13 41.97
TraesCS6D01G359600.1 Wheat cytosol 22.58 41.42
HORVU1Hr1G066370.1 Barley cytosol, peroxisome 43.55 40.79
Zm00001d030548_P001 Maize extracellular 45.48 39.94
TraesCS5B01G224800.1 Wheat cytosol, nucleus, peroxisome 40.0 39.87
HORVU7Hr1G028840.5 Barley cytosol 44.84 39.15
HORVU7Hr1G028850.1 Barley cytosol 44.52 38.66
HORVU7Hr1G009310.3 Barley cytosol 42.9 38.33
TraesCS7D01G142300.1 Wheat cytosol 43.87 38.31
OQU75951 Sorghum cytosol 42.58 38.15
TraesCS1A01G320000.1 Wheat cytosol 43.55 38.14
TraesCS7A01G140900.1 Wheat cytosol 43.87 38.1
TraesCS7D01G141600.1 Wheat cytosol, mitochondrion, peroxisome 43.87 38.1
TraesCS4A01G439800.1 Wheat cytosol 43.55 37.92
TraesCS1B01G332300.1 Wheat cytosol 42.26 37.86
TraesCS1D01G319700.1 Wheat cytosol 44.19 37.85
HORVU7Hr1G028870.3 Barley cytosol 43.55 37.82
TraesCS7B01G042100.2 Wheat cytosol 43.23 37.75
TraesCS7D01G142000.2 Wheat cytosol 43.23 37.75
TraesCSU01G102900.1 Wheat cytosol 43.23 37.75
TraesCS6B01G412800.1 Wheat cytosol 43.23 37.64
TraesCS7B01G042300.1 Wheat cytosol 43.23 37.64
TraesCS7D01G046100.1 Wheat cytosol 43.23 37.64
TraesCS6A01G375200.1 Wheat cytosol 43.23 37.53
TraesCS7A01G051800.1 Wheat cytosol 42.9 37.46
TraesCS7B01G042400.2 Wheat cytosol 42.9 37.46
TraesCS6D01G359700.1 Wheat cytosol 42.9 37.36
EER88660 Sorghum cytosol 44.19 37.33
TraesCS7A01G141100.1 Wheat cytosol 44.19 37.33
HORVU7Hr1G009140.4 Barley cytosol, peroxisome 43.23 37.33
TraesCS1B01G332200.1 Wheat cytosol 42.58 37.29
TraesCS7A01G141000.1 Wheat cytosol 42.9 37.25
TraesCS7B01G041900.1 Wheat cytosol 42.9 37.25
TraesCS7D01G142200.1 Wheat cytosol 42.9 37.25
EER87956 Sorghum peroxisome 43.55 37.19
TraesCS6A01G320700.1 Wheat cytosol 39.68 37.16
TraesCS4A01G320100.1 Wheat cytosol 40.0 37.13
TraesCS7A01G140300.2 Wheat cytosol 43.23 37.12
HORVU6Hr1G078640.9 Barley cytosol, peroxisome 40.32 37.09
Os02t0320800-01 Rice cytosol, peroxisome 36.13 37.09
TraesCS7A01G051200.1 Wheat cytosol 42.58 37.08
TraesCS5D01G565100.1 Wheat cytosol 39.68 36.83
TraesCS4A01G438300.1 Wheat cytosol 42.26 36.8
Os06t0176500-00 Rice cytosol 32.9 36.69
Os06t0177700-00 Rice cytosol 32.9 36.69
TraesCS4A01G442500.1 Wheat cytosol 41.94 36.62
TraesCS6B01G145400.1 Wheat cytosol 40.97 36.49
TraesCS6D01G107100.1 Wheat cytosol 40.97 36.49
Os02t0280700-01 Rice cytosol 41.29 36.47
HORVU6Hr1G088470.1 Barley cytosol 41.94 36.41
Zm00001d045145_P001 Maize peroxisome 41.94 36.41
TraesCS5B01G282100.1 Wheat golgi 43.23 36.41
TraesCS7A01G055900.1 Wheat cytosol 41.61 36.34
TraesCS7A01G140200.1 Wheat cytosol 39.03 36.34
TraesCS6B01G351600.1 Wheat cytosol 38.71 36.25
HORVU6Hr1G088540.1 Barley cytosol 41.61 36.13
TraesCS5A01G283100.2 Wheat cytosol 41.61 36.13
TraesCSU01G115000.1 Wheat cytosol 40.32 36.13
TraesCS4A01G496600.1 Wheat cytosol 39.35 36.09
Zm00001d045141_P001 Maize cytosol 32.58 36.07
KXG29110 Sorghum cytosol 42.26 35.99
TraesCS6D01G300600.1 Wheat cytosol 38.39 35.95
HORVU5Hr1G075760.1 Barley cytosol 42.58 35.87
TraesCS5D01G289800.1 Wheat cytosol, mitochondrion 42.58 35.87
TraesCS5D01G290600.1 Wheat cytosol 42.58 35.87
TraesCS7D01G141900.1 Wheat cytosol 41.29 35.85
HORVU7Hr1G009320.1 Barley cytosol 31.29 35.79
TraesCS7A01G001400.1 Wheat cytosol 38.06 35.76
TraesCS7A01G140500.1 Wheat cytosol 28.71 35.74
HORVU7Hr1G010150.1 Barley cytosol, endoplasmic reticulum, peroxisome 40.97 35.67
TraesCS7D01G050500.1 Wheat cytosol 40.65 35.49
TraesCS5A01G226400.1 Wheat cytosol 41.29 35.36
TraesCS6D01G138200.1 Wheat cytosol 41.94 35.33
TraesCS5D01G007300.1 Wheat cytosol 21.94 35.23
KXG19442 Sorghum cytosol 41.94 35.23
EER87960 Sorghum cytosol 20.0 35.23
TraesCS5D01G233600.1 Wheat cytosol, nucleus, peroxisome 40.0 35.23
Os06t0176700-01 Rice cytosol 39.68 35.14
Os06t0178500-01 Rice cytosol 39.68 35.14
TraesCS5D01G233700.1 Wheat cytosol 40.32 35.11
TraesCS5A01G282700.1 Wheat golgi 41.61 35.05
TraesCS7B01G042200.3 Wheat peroxisome 40.97 34.7
TraesCS6B01G412700.1 Wheat cytosol 39.68 34.65
TraesCS6D01G359300.1 Wheat cytosol 39.68 34.65
TraesCS5A01G282800.1 Wheat cytosol 38.39 34.59
TraesCS5B01G224900.1 Wheat cytosol 39.68 34.55
EER89306 Sorghum cytosol 40.0 34.54
HORVU7Hr1G028880.10 Barley plastid 43.23 34.54
HORVU6Hr1G088420.2 Barley cytosol, peroxisome 39.68 34.45
HORVU7Hr1G021490.3 Barley cytosol, peroxisome 34.84 34.18
HORVU6Hr1G088440.1 Barley cytosol 39.03 33.99
TraesCS5D01G290400.1 Wheat cytosol 40.97 33.78
TraesCS6A01G148800.2 Wheat cytosol 40.0 33.6
Os06t0176300-00 Rice cytosol 33.23 33.55
Os06t0177600-00 Rice cytosol 33.23 33.55
Zm00001d037487_P001 Maize cytosol 39.03 33.52
Solyc01g067620.2.1 Tomato nucleus 39.03 33.33
TraesCS7B01G042500.1 Wheat cytosol 39.03 33.33
TraesCS7D01G142400.1 Wheat cytosol 39.68 33.24
HORVU7Hr1G028710.2 Barley cytosol 40.0 33.16
TraesCS5D01G007400.1 Wheat cytosol 38.39 33.06
TraesCS1A01G320100.1 Wheat cytosol 43.23 33.0
TraesCS7B01G041600.1 Wheat cytosol 39.68 32.89
TraesCS7A01G140100.1 Wheat cytosol 28.39 32.84
HORVU5Hr1G065620.7 Barley plastid 38.71 32.7
Solyc08g062370.2.1 Tomato cytoskeleton, cytosol, peroxisome 18.71 32.58
Solyc02g071490.2.1 Tomato cytosol 37.74 32.41
TraesCS6A01G375100.1 Wheat plastid 35.81 32.36
TraesCS5D01G233800.1 Wheat cytosol 31.94 32.25
TraesCS7D01G142100.1 Wheat cytosol, nucleus, peroxisome 43.55 31.84
EER87955 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 40.0 31.79
Solyc02g071430.2.1 Tomato cytosol 37.1 31.59
Solyc02g071440.2.1 Tomato cytosol 35.48 31.43
Solyc02g071380.2.1 Tomato cytosol, nucleus, peroxisome 36.13 31.2
Solyc02g071500.2.1 Tomato cytosol 35.48 31.07
Solyc02g071400.2.1 Tomato cytosol 33.87 30.88
HORVU2Hr1G096500.1 Barley cytosol 20.32 30.73
Solyc02g071480.2.1 Tomato cytosol, nucleus, peroxisome 33.55 30.41
HORVU5Hr1G124390.1 Barley cytosol 29.35 30.03
Solyc02g071450.2.1 Tomato cytosol 34.84 30.0
Solyc02g071470.2.1 Tomato cytosol 34.84 30.0
Solyc02g071410.2.1 Tomato cytosol 34.19 29.44
Solyc02g071360.2.1 Tomato cytosol 33.87 28.93
HORVU0Hr1G019590.1 Barley peroxisome 21.61 26.69
Os06t0178700-01 Rice cytosol 10.65 9.32
Protein Annotations
Gene3D:2.60.120.330MapMan:50.1.13InterPro:DIOX_NGO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0055114InterPro:IPNS-like
InterPro:IPR005123InterPro:IPR027443UniProt:K4D4A9InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171PFAM:PF14226
PFscan:PS51471PANTHER:PTHR10209PANTHER:PTHR10209:SF373SUPFAM:SSF51197EnsemblPlantsGene:Solyc10g086780.1EnsemblPlants:Solyc10g086780.1.1
UniParc:UPI0002769630:::::
Description
No Description!
Coordinates
chr10:+:65501792..65504213
Molecular Weight (calculated)
35464.8 Da
IEP (calculated)
4.828
GRAVY (calculated)
-0.221
Length
310 amino acids
Sequence
(BLAST)
001: MLNVPVVDLR LLTSTARKQE LNKLQSGLKF CGCIQVINHG LADSFLDKVH EISKQFFALP AEEKLKYART VDDIYGYGND SVLSDKQKLD WTDRLYLNVF
101: PEAIRNLKLW PQKPECFREV FEEYINNMKL LSESLLKAMA VSLNLEENCF LDQCGEGREM IARFNFYPPC PTPEVVLGIK PHADASAITI LLQDKEVEGL
201: QVLKDDQWFR VPIVPYGLLV NVGDQVEIMS NGIFKSPVHR VVTNADQERN TLAVFIMPDV TDGIGPVEKL INEEMPRAYK DVKNYVELFF QSYQHGKRPI
301: ETAMICQEQD
Best Arabidopsis Sequence Match ( AT5G20400.1 )
(BLAST)
001: MEKPKFKTVQ EVVAAGEGLP ERYLHAPTGD GEVQPLNAAV PEMDIPAIDL NLLLSSSEAG QQELSKLHSA LSTWGVVQVM NHGITKAFLD KIYKLTKEFF
101: ALPTEEKQKC AREIDSIQGY GNDMILWDDQ VLDWIDRLYI TTYPEDQRQL NFWPEVPLGF RETLHEYTMK QRIVIEQFFK AMARSLELEE NSFLDMYGES
201: ATLDTRFNMY PPCPSPDKVI GVKPHADGSA ITLLLPDKDV GGLQFQKDGK WYKAPIVPDT ILINVGDQME IMSNGIYKSP VHRVVTNREK ERISVATFCI
301: PGADKEIQPV NELVSEARPR LYKTVKKYVE LYFKYYQQGR RPIEAALI
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q84K82]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.