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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • peroxisome 1
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, peroxisome
MultiLoc:peroxisome
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7B01G042300.1 Wheat cytosol 94.4 94.66
TraesCS7D01G142200.1 Wheat cytosol 94.4 94.4
TraesCS7A01G141000.1 Wheat cytosol 91.32 91.32
HORVU7Hr1G028840.5 Barley cytosol 73.11 73.52
EER88660 Sorghum cytosol 67.23 65.4
HORVU6Hr1G088540.1 Barley cytosol 64.99 64.99
HORVU6Hr1G088470.1 Barley cytosol 64.43 64.43
HORVU6Hr1G088440.1 Barley cytosol 63.03 63.2
HORVU6Hr1G088420.2 Barley cytosol, peroxisome 62.47 62.47
HORVU7Hr1G021490.3 Barley cytosol, peroxisome 52.1 58.86
HORVU7Hr1G009200.1 Barley cytosol, peroxisome 29.13 55.62
HORVU1Hr1G066370.1 Barley cytosol, peroxisome 48.46 52.27
HORVU6Hr1G078640.9 Barley cytosol, peroxisome 48.46 51.34
HORVU7Hr1G009140.4 Barley cytosol, peroxisome 51.54 51.25
HORVU7Hr1G009310.3 Barley cytosol 49.02 50.43
HORVU7Hr1G028850.1 Barley cytosol 50.42 50.42
HORVU7Hr1G009320.1 Barley cytosol 36.41 47.97
Bra002299.1-P Field mustard cytosol 20.45 47.71
HORVU7Hr1G010150.1 Barley cytosol, endoplasmic reticulum, peroxisome 47.06 47.19
VIT_11s0118g00400.t01 Wine grape peroxisome 35.85 46.72
HORVU7Hr1G028880.10 Barley plastid 49.58 45.62
Bra022690.1-P Field mustard cytoskeleton, cytosol, peroxisome 28.57 45.33
CDY28799 Canola cytoskeleton, cytosol, peroxisome 28.57 45.33
KRH03607 Soybean cytosol, peroxisome, plastid 43.98 44.73
VIT_11s0118g00390.t01 Wine grape cytosol, nucleus, peroxisome 44.26 44.38
HORVU5Hr1G065620.7 Barley plastid 45.38 44.14
HORVU5Hr1G075760.1 Barley cytosol 45.38 44.02
Solyc10g086780.1.1 Tomato cytosol 37.82 43.55
PGSC0003DMT400073345 Potato cytosol 43.14 43.38
HORVU5Hr1G124390.1 Barley cytosol 36.69 43.23
PGSC0003DMT400049392 Potato cytosol 42.02 43.23
Solyc07g045040.2.1 Tomato cytosol 42.58 43.18
VIT_11s0118g00370.t01 Wine grape plastid 38.94 43.17
Solyc06g068270.2.1 Tomato nucleus 42.58 42.82
AT5G20400.1 Thale cress cytosol 41.74 42.82
HORVU7Hr1G028710.2 Barley cytosol 44.82 42.78
PGSC0003DMT400049384 Potato cytosol 33.61 42.7
KRH60778 Soybean cytosol, nucleus, peroxisome 42.58 42.7
CDY51847 Canola cytosol 41.46 42.53
Bra006559.1-P Field mustard cytosol 41.18 42.0
Solyc10g076840.1.1 Tomato cytosol 40.34 41.5
AT1G49390.1 Thale cress cytosol 40.34 41.38
AT5G20550.1 Thale cress cytosol 40.34 41.26
CDY71604 Canola cytosol 40.34 41.26
Bra002298.1-P Field mustard cytosol 40.06 41.09
CDY63243 Canola mitochondrion 17.37 41.06
HORVU2Hr1G096500.1 Barley cytosol 23.53 40.98
CDX92465 Canola cytosol 40.06 40.97
VIT_11s0118g00360.t01 Wine grape cytosol 45.66 40.95
CDY56860 Canola cytosol 39.78 40.92
VIT_09s0002g08090.t01 Wine grape cytosol, nucleus, peroxisome 40.34 40.91
AT5G54000.2 Thale cress cytosol 38.66 39.54
KRH51466 Soybean peroxisome 35.85 39.38
HORVU0Hr1G019590.1 Barley peroxisome 26.05 37.05
KRH23597 Soybean cytosol, peroxisome 34.73 36.47
PGSC0003DMT400044918 Potato cytosol 23.25 36.09
HORVU1Hr1G056210.5 Barley cytosol 33.33 33.52
HORVU3Hr1G091210.2 Barley cytosol 33.61 32.26
HORVU2Hr1G010930.2 Barley cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 31.37 31.02
HORVU2Hr1G010950.3 Barley cytoskeleton, cytosol, peroxisome 30.81 30.47
HORVU4Hr1G080610.2 Barley cytosol 30.81 30.3
HORVU4Hr1G088340.42 Barley cytosol 30.81 29.57
HORVU3Hr1G098580.2 Barley plastid 37.82 29.48
HORVU2Hr1G010960.1 Barley cytosol, mitochondrion, peroxisome 28.85 28.77
HORVU3Hr1G104290.2 Barley plastid 29.97 25.12
HORVU1Hr1G077370.1 Barley plastid 25.21 21.33
Protein Annotations
Gene3D:2.60.120.330MapMan:50.1.13UniProt:A0A287VVA5InterPro:DIOX_NGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0055114
EnsemblPlantsGene:HORVU7Hr1G028870EnsemblPlants:HORVU7Hr1G028870.3InterPro:IPNS-likeInterPro:IPR005123InterPro:IPR027443InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171PFAM:PF14226PFscan:PS51471PANTHER:PTHR10209PANTHER:PTHR10209:SF114SUPFAM:SSF51197
UniParc:UPI000B486A4E:::::
Description
No Description!
Coordinates
chrchr7H:-:53506258..53507964
Molecular Weight (calculated)
40726.8 Da
IEP (calculated)
4.671
GRAVY (calculated)
-0.274
Length
357 amino acids
Sequence
(BLAST)
001: MACEEPSKIV NIPSIVQELV TCVQEPPSQY VVPEQNRPDV ACSEMPEPIP IIDLSRLPAP GNSSDEVAKM QSALESWGLF LAVGHGIQPS FLDEVMKVTR
101: EFYKLPPEEK QKYSNLVDGQ EFRMEGYGND IVVSEKQTLD WSDRLYLVVE PESRRIYSLW PTHPPSFRDI LCEYAVKCRE IASLVLRHLA RMLNLHEDYF
201: VEMIEEDAIT YARFNYYPHC PKPDQVLGLK PHTDATVITV VFIDDSVNGL QVQKNGVWYK VPIVPNALLV NTGDAMEILS NGFFKSPVHR AVTNAEKDRV
301: SLVMFYTPDP EREIEPAAEL VDEKRPTQYR KIKTKDYLTK LFETFAEGTL VIDTVKI
Best Arabidopsis Sequence Match ( AT1G17010.1 )
(BLAST)
001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.