Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_10s0003g02360.t01 | Wine grape | cytosol | 92.98 | 69.74 |
| VIT_10s0003g02350.t01 | Wine grape | cytosol | 91.67 | 69.44 |
| VIT_10s0003g02340.t01 | Wine grape | cytosol | 92.11 | 68.4 |
| VIT_10s0003g02400.t01 | Wine grape | cytosol | 89.91 | 66.78 |
| VIT_10s0003g02280.t01 | Wine grape | cytosol | 82.46 | 61.24 |
| VIT_10s0003g02330.t01 | Wine grape | plastid | 93.86 | 59.61 |
| VIT_10s0003g02290.t01 | Wine grape | plastid | 93.42 | 59.33 |
| VIT_10s0003g02390.t01 | Wine grape | cytosol | 93.86 | 59.12 |
| VIT_10s0003g02300.t01 | Wine grape | cytosol | 91.67 | 57.73 |
| KRH21128 | Soybean | cytosol | 61.84 | 51.27 |
| VIT_16s0022g00420.t01 | Wine grape | cytosol, nucleus, peroxisome, plastid | 77.63 | 48.23 |
| VIT_16s0022g00430.t01 | Wine grape | plastid | 78.95 | 46.75 |
| VIT_10s0003g02260.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 37.72 | 45.99 |
| VIT_02s0012g00320.t01 | Wine grape | cytosol | 50.0 | 41.76 |
| KRH11118 | Soybean | cytosol, nucleus, peroxisome, plastid | 66.23 | 40.59 |
| KRH58593 | Soybean | cytosol, peroxisome, plastid | 62.72 | 39.39 |
| PGSC0003DMT400059406 | Potato | peroxisome | 42.11 | 39.34 |
| VIT_10s0003g02470.t01 | Wine grape | cytosol, mitochondrion, peroxisome, plastid | 36.84 | 39.25 |
| VIT_15s0021g00960.t01 | Wine grape | cytosol | 59.21 | 37.09 |
| VIT_15s0021g00950.t01 | Wine grape | cytosol | 55.7 | 36.49 |
| VIT_10s0003g02450.t01 | Wine grape | cytosol | 58.33 | 36.34 |
| VIT_02s0012g00380.t01 | Wine grape | cytosol | 41.67 | 35.58 |
| VIT_10s0003g02320.t01 | Wine grape | cytosol, golgi, peroxisome | 67.54 | 34.53 |
| VIT_02s0012g00360.t01 | Wine grape | cytosol | 48.68 | 33.04 |
| VIT_02s0012g00450.t01 | Wine grape | cytosol, nucleus, peroxisome | 47.81 | 30.88 |
| VIT_02s0012g00400.t01 | Wine grape | cytosol, peroxisome, plastid | 46.49 | 30.64 |
| VIT_02s0012g00410.t01 | Wine grape | plastid | 46.49 | 30.64 |
| VIT_02s0012g00390.t01 | Wine grape | cytosol | 46.49 | 30.03 |
| VIT_11s0118g00370.t01 | Wine grape | plastid | 41.23 | 29.19 |
| VIT_11s0118g00400.t01 | Wine grape | peroxisome | 34.21 | 28.47 |
| VIT_02s0012g00350.t01 | Wine grape | cytosol | 42.54 | 28.03 |
| VIT_05s0020g01310.t01 | Wine grape | cytosol | 43.42 | 27.12 |
| VIT_11s0118g00390.t01 | Wine grape | cytosol, nucleus, peroxisome | 41.23 | 26.4 |
| VIT_13s0019g02010.t01 | Wine grape | cytosol | 41.23 | 25.61 |
| VIT_03s0091g01080.t01 | Wine grape | cytosol | 41.23 | 25.34 |
| VIT_09s0002g08090.t01 | Wine grape | cytosol, nucleus, peroxisome | 39.04 | 25.28 |
| VIT_10s0003g02420.t01 | Wine grape | cytosol | 15.35 | 24.82 |
| VIT_10s0003g02430.t01 | Wine grape | cytosol, nucleus, peroxisome | 51.75 | 23.98 |
| VIT_11s0118g00360.t01 | Wine grape | cytosol | 40.35 | 23.12 |
| VIT_02s0012g00440.t01 | Wine grape | extracellular | 11.84 | 20.61 |
| VIT_08s0007g00750.t01 | Wine grape | cytosol, nucleus, peroxisome | 40.35 | 13.12 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:50.1.13 | ProteinID:CBI30790 | ProteinID:CBI30790.3 | UniProt:D7TJW8 | InterPro:DIOX_N |
| EMBL:FN595992 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 |
| InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF370 |
| SUPFAM:SSF51197 | UniParc:UPI0001BE3908 | ArrayExpress:VIT_10s0003g02380 | EnsemblPlantsGene:VIT_10s0003g02380 | EnsemblPlants:VIT_10s0003g02380.t01 | RefSeq:XP_002270646 |
| RefSeq:XP_002270646.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr10:+:4275894..4277927
Molecular Weight (calculated)
25851.4 Da
IEP (calculated)
4.884
GRAVY (calculated)
-0.225
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MKHLIMSETA DSELEKLHST CKEWGFFQLV NHGVSSSLVE KLKSEIGEFY KLPLEERIKY KMRPGDFEGY GLSPIRSEDQ KLDWGDRFYM TTNPIHTRKP
101: YLLPELPPSL RDSLECYLAE LQKLAMMLLG FMAKALKLEK GEMEELFEDG KQSVRMTYYP PCPQPELVMG LTPHSDATGI TILLQINGVD GLQIKNDGVW
201: IPVSFLPDAL VVNIGDILEV SPHGYTLA
101: YLLPELPPSL RDSLECYLAE LQKLAMMLLG FMAKALKLEK GEMEELFEDG KQSVRMTYYP PCPQPELVMG LTPHSDATGI TILLQINGVD GLQIKNDGVW
201: IPVSFLPDAL VVNIGDILEV SPHGYTLA
001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.