Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 4
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_16s0022g00420.t01 | Wine grape | cytosol, nucleus, peroxisome, plastid | 89.87 | 94.28 |
| VIT_10s0003g02380.t01 | Wine grape | cytosol | 46.75 | 78.95 |
| VIT_10s0003g02360.t01 | Wine grape | cytosol | 62.34 | 78.95 |
| VIT_10s0003g02350.t01 | Wine grape | cytosol | 61.56 | 78.74 |
| VIT_10s0003g02280.t01 | Wine grape | cytosol | 61.56 | 77.2 |
| VIT_10s0003g02400.t01 | Wine grape | cytosol | 61.3 | 76.87 |
| VIT_10s0003g02340.t01 | Wine grape | cytosol | 61.3 | 76.87 |
| VIT_10s0003g02260.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 36.88 | 75.94 |
| VIT_10s0003g02290.t01 | Wine grape | plastid | 69.09 | 74.09 |
| VIT_10s0003g02330.t01 | Wine grape | plastid | 68.83 | 73.82 |
| VIT_10s0003g02300.t01 | Wine grape | cytosol | 69.09 | 73.48 |
| VIT_10s0003g02390.t01 | Wine grape | cytosol | 69.09 | 73.48 |
| KRH11118 | Soybean | cytosol, nucleus, peroxisome, plastid | 58.7 | 60.75 |
| VIT_10s0003g02420.t01 | Wine grape | cytosol | 21.04 | 57.45 |
| KRH58593 | Soybean | cytosol, peroxisome, plastid | 54.03 | 57.3 |
| KRH21128 | Soybean | cytosol | 40.26 | 56.36 |
| VIT_15s0021g00950.t01 | Wine grape | cytosol | 48.83 | 54.02 |
| VIT_15s0021g00960.t01 | Wine grape | cytosol | 50.13 | 53.02 |
| PGSC0003DMT400059406 | Potato | peroxisome | 33.51 | 52.87 |
| VIT_10s0003g02470.t01 | Wine grape | cytosol, mitochondrion, peroxisome, plastid | 29.35 | 52.8 |
| VIT_10s0003g02450.t01 | Wine grape | cytosol | 49.61 | 52.19 |
| VIT_02s0012g00440.t01 | Wine grape | extracellular | 15.84 | 46.56 |
| VIT_02s0012g00450.t01 | Wine grape | cytosol, nucleus, peroxisome | 41.82 | 45.61 |
| VIT_02s0012g00390.t01 | Wine grape | cytosol | 41.04 | 44.76 |
| VIT_02s0012g00320.t01 | Wine grape | cytosol | 31.43 | 44.32 |
| VIT_02s0012g00360.t01 | Wine grape | cytosol | 37.92 | 43.45 |
| VIT_02s0012g00400.t01 | Wine grape | cytosol, peroxisome, plastid | 37.66 | 41.91 |
| VIT_10s0003g02320.t01 | Wine grape | cytosol, golgi, peroxisome | 47.79 | 41.26 |
| VIT_02s0012g00350.t01 | Wine grape | cytosol | 36.88 | 41.04 |
| VIT_02s0012g00380.t01 | Wine grape | cytosol | 27.79 | 40.07 |
| VIT_11s0118g00400.t01 | Wine grape | peroxisome | 26.49 | 37.23 |
| VIT_13s0019g02010.t01 | Wine grape | cytosol | 35.32 | 37.06 |
| VIT_05s0020g01310.t01 | Wine grape | cytosol | 35.06 | 36.99 |
| VIT_10s0003g02430.t01 | Wine grape | cytosol, nucleus, peroxisome | 46.75 | 36.59 |
| VIT_11s0118g00390.t01 | Wine grape | cytosol, nucleus, peroxisome | 33.25 | 35.96 |
| VIT_11s0118g00370.t01 | Wine grape | plastid | 29.87 | 35.71 |
| VIT_02s0012g00410.t01 | Wine grape | plastid | 31.95 | 35.55 |
| VIT_09s0002g08090.t01 | Wine grape | cytosol, nucleus, peroxisome | 31.69 | 34.66 |
| VIT_03s0091g01080.t01 | Wine grape | cytosol | 33.25 | 34.5 |
| VIT_11s0118g00360.t01 | Wine grape | cytosol | 33.25 | 32.16 |
| VIT_08s0007g00750.t01 | Wine grape | cytosol, nucleus, peroxisome | 34.29 | 18.83 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:50.1.13 | ProteinID:CCB49337 | ProteinID:CCB49337.1 | InterPro:DIOX_N | UniProt:F6HAV2 |
| EMBL:FN595506 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 |
| InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF176 |
| SUPFAM:SSF51197 | UniParc:UPI0002108D51 | ArrayExpress:VIT_16s0022g00430 | EnsemblPlantsGene:VIT_16s0022g00430 | EnsemblPlants:VIT_16s0022g00430.t01 | : |
Description
No Description!
Coordinates
chr16:+:11462797..11464363
Molecular Weight (calculated)
43675.9 Da
IEP (calculated)
5.489
GRAVY (calculated)
-0.277
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSIPSSSF GTPPSILSIQ ELAKQPMATV PQIFLLEDQE RPVLRENAAL PDIPTIDMKR LIMSETTDFE LDKLHSACKE WGFFQGQTDP YISWTLSCFS
101: NKIIETNNWV DAQLVNHGVS SSLVEDLKHE IVEFYKLPLE EKMKYKTPAD AEGYGPSIIR SEDQKLDWGD RFYMLTNPIH RRKPHLLPQL PPSLRDNLEL
201: YISDSQKLAM RLLGLMAKAM KLDKREMEEL FDDGKQAVRM TYYPPCPQSE MVMGIAPHSD ATGITILLQV NEVDGLQIKK DGVWIPVNVL PDALVVNVGD
301: ILEIVSNGMY TSIEHRATVN STKERISIAM FFSPKFSAEI GPAAGLITPQ NLPVFKRIGM EKYYEDFFSR KLDGKSYLEH MKIKK
101: NKIIETNNWV DAQLVNHGVS SSLVEDLKHE IVEFYKLPLE EKMKYKTPAD AEGYGPSIIR SEDQKLDWGD RFYMLTNPIH RRKPHLLPQL PPSLRDNLEL
201: YISDSQKLAM RLLGLMAKAM KLDKREMEEL FDDGKQAVRM TYYPPCPQSE MVMGIAPHSD ATGITILLQV NEVDGLQIKK DGVWIPVNVL PDALVVNVGD
301: ILEIVSNGMY TSIEHRATVN STKERISIAM FFSPKFSAEI GPAAGLITPQ NLPVFKRIGM EKYYEDFFSR KLDGKSYLEH MKIKK
001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.