Factsheet for VIT_08s0007g00750.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH00010	Soybean	cytosol, peroxisome	27.1	67.86
KRH00008	Soybean	cytosol	33.95	63.13
KRH00004	Soybean	cytosol	28.1	59.88
KRH49137	Soybean	cytosol, peroxisome	25.68	55.9
VIT_13s0019g02010.t01	Wine grape	cytosol	29.24	55.86
VIT_02s0012g00320.t01	Wine grape	cytosol	17.55	45.05
VIT_05s0020g01310.t01	Wine grape	cytosol	22.4	43.01
VIT_02s0012g00440.t01	Wine grape	extracellular	7.99	42.75
VIT_02s0012g00390.t01	Wine grape	cytosol	21.4	42.49
VIT_02s0012g00450.t01	Wine grape	cytosol, nucleus, peroxisome	21.26	42.21
VIT_02s0012g00360.t01	Wine grape	cytosol	19.69	41.07
VIT_02s0012g00400.t01	Wine grape	cytosol, peroxisome, plastid	20.11	40.75
VIT_15s0021g00960.t01	Wine grape	cytosol	21.11	40.66
VIT_10s0003g02420.t01	Wine grape	cytosol	8.13	40.43
VIT_10s0003g02380.t01	Wine grape	cytosol	13.12	40.35
VIT_10s0003g02350.t01	Wine grape	cytosol	17.12	39.87
VIT_15s0021g00950.t01	Wine grape	cytosol	19.69	39.66
VIT_10s0003g02260.t01	Wine grape	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	10.56	39.57
VIT_10s0003g02360.t01	Wine grape	cytosol	17.12	39.47
VIT_10s0003g02280.t01	Wine grape	cytosol	17.12	39.09
VIT_10s0003g02340.t01	Wine grape	cytosol	17.12	39.09
VIT_10s0003g02400.t01	Wine grape	cytosol	17.12	39.09
VIT_02s0012g00350.t01	Wine grape	cytosol	19.26	39.02
VIT_10s0003g02450.t01	Wine grape	cytosol	19.97	38.25
VIT_11s0118g00370.t01	Wine grape	plastid	17.4	37.89
VIT_11s0118g00400.t01	Wine grape	peroxisome	14.41	36.86
VIT_11s0118g00390.t01	Wine grape	cytosol, nucleus, peroxisome	18.4	36.24
VIT_10s0003g02330.t01	Wine grape	plastid	18.54	36.21
VIT_02s0012g00410.t01	Wine grape	plastid	17.83	36.13
VIT_16s0022g00420.t01	Wine grape	cytosol, nucleus, peroxisome, plastid	18.83	35.97
VIT_10s0003g02290.t01	Wine grape	plastid	18.4	35.93
VIT_10s0003g02300.t01	Wine grape	cytosol	18.54	35.91
VIT_10s0003g02390.t01	Wine grape	cytosol	18.4	35.64
VIT_02s0012g00380.t01	Wine grape	cytosol	13.41	35.21
VIT_10s0003g02470.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	10.7	35.05
VIT_11s0118g00360.t01	Wine grape	cytosol	19.69	34.67
VIT_09s0002g08090.t01	Wine grape	cytosol, nucleus, peroxisome	17.4	34.66
VIT_16s0022g00430.t01	Wine grape	plastid	18.83	34.29
VIT_03s0091g01080.t01	Wine grape	cytosol	17.4	32.88
VIT_10s0003g02430.t01	Wine grape	cytosol, nucleus, peroxisome	20.4	29.07
VIT_10s0003g02320.t01	Wine grape	cytosol, golgi, peroxisome	13.41	21.08

Protein Annotations

EntrezGene:100240894	wikigene:100240894	EntrezGene:100245988	wikigene:100245988	Gene3D:2.60.120.330	MapMan:50.1.13
ProteinID:CCB55571	ProteinID:CCB55571.1	InterPro:DIOX_N	UniProt:F6HL84	EMBL:FN595991	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPNS-like
InterPro:IPR005123	InterPro:IPR027443	EntrezGene:LOC100240894	wikigene:LOC100240894	EntrezGene:LOC100245988	wikigene:LOC100245988
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF184
SUPFAM:SSF51197	UniParc:UPI000210965E	ArrayExpress:VIT_08s0007g00750	EnsemblPlantsGene:VIT_08s0007g00750	EnsemblPlants:VIT_08s0007g00750.t01	RefSeq:XP_002271117
RefSeq:XP_002271117.1	RefSeq:XP_002271148	RefSeq:XP_002271148.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr8:-:14960085..14969195

Molecular Weight (calculated)

80181.9 Da

IEP (calculated)

5.077

GRAVY (calculated)

-0.381

Length

701 amino acids

Sequence
(BLAST)

001: MDINIAEAVE GEDALTYAGS LPVPNVQEME RSNPMQVPER YIRNQEDMPK TTDAIHLSCE IPVIDLSLLS NGHKEELKKL ELACEEWGFF QVVNHGVAEE
101: VLQGMKYSAS EFFELPLQEK NKYAMASDDI QGYGQAFVVS EEQKLDWSDI LVLVIYPTRF RKLKFWPNAP KEFKEKIEVY SNEVKRVGEE LLCSLSLIMG
201: MDKDTLLGLH KEFVQALRVN YYPTCSIPDQ VLGVSPHSDT SILTILMQDD DVTGLQIKHS GEWVPVKPIP NALVVNIGDV IEIWSNGKYR SIEHRAVTNK
301: NRARISFASF ILPHDDVEIE PFDHLVDSQQ PIKIYKKVRY GDYLRHSMKR KMEGKFHTEM EMVRCNLSCI PDRFKRSEED KSKGVDLSVL SPQIPVIDLA
401: LLSSENVEEL KKLEWACKCW GFFMATNHGI PEEVLQRVKD AAAGFFELPF EEKKAYSLDS NEMQGYGQPF MVSEEKLDWS DSLILRIYPS HFQKLKFWPT
501: TPADFRDTVE TYSTEVRKVA ETLLGSLSLT MGMTKDALLR LHKDMAQALR VNYYPTCRNP DQVIGISPHS DATSISILLQ DDDVTGLEIQ HDGGWVPVHP
601: ILNSLVVNIG DVIEMWSNGK YNSIEHRTMA NENRARMSLA TFFTPDTDVE IEPLDHILDP QGSNRIYKKV KYGDYLTRSL WKKIEGKTNL RFAKYNDKVE
701: S

Best Arabidopsis Sequence Match ( AT3G21420.1 )
(BLAST)

001: MAPLPISSIR VGKIDDVQEL IKSKPNKVPE RFIREEYERG VVVSSLKTHH LHHQIPVIDL SKLSKPDNDD FFFEILKLSQ ACEDWGFFQV INHGIEVEVV
101: EDIEEVASEF FDMPLEEKKK YPMEPGTVQG YGQAFIFSED QKLDWCNMFA LGVHPPQIRN PKLWPSKPAR FSESLEGYSK EIRELCKRLL KYIAISLGLK
201: EERFEEMFGE AVQAVRMNYY PPCSSPDLVL GLSPHSDGSA LTVLQQSKNS CVGLQILKDN TWVPVKPLPN ALVINIGDTI EVLSNGKYKS VEHRAVTNRE
301: KERLTIVTFY APNYEVEIEP MSELVDDETN PCKYRSYNHG DYSYHYVSNK LQGKKSLDFA KILN

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LIF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.