Factsheet for VIT_13s0019g02010.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0012g00320.t01	Wine grape	cytosol	34.06	45.79
VIT_02s0012g00440.t01	Wine grape	extracellular	16.08	45.04
VIT_02s0012g00360.t01	Wine grape	cytosol	39.24	42.86
VIT_15s0021g00960.t01	Wine grape	cytosol	42.51	42.86
VIT_15s0021g00950.t01	Wine grape	cytosol	40.6	42.82
VIT_02s0012g00390.t01	Wine grape	cytosol	41.14	42.78
VIT_02s0012g00450.t01	Wine grape	cytosol, nucleus, peroxisome	40.33	41.93
VIT_10s0003g02450.t01	Wine grape	cytosol	41.69	41.8
VIT_10s0003g02380.t01	Wine grape	cytosol	25.61	41.23
VIT_10s0003g02260.t01	Wine grape	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	20.71	40.64
VIT_02s0012g00350.t01	Wine grape	cytosol	38.15	40.46
VIT_10s0003g02360.t01	Wine grape	cytosol	32.97	39.8
VIT_10s0003g02280.t01	Wine grape	cytosol	33.24	39.74
VIT_05s0020g01310.t01	Wine grape	cytosol	39.51	39.73
VIT_10s0003g02420.t01	Wine grape	cytosol	15.26	39.72
VIT_02s0012g00400.t01	Wine grape	cytosol, peroxisome, plastid	37.06	39.31
VIT_10s0003g02340.t01	Wine grape	cytosol	32.7	39.09
VIT_10s0003g02350.t01	Wine grape	cytosol	31.88	38.87
VIT_10s0003g02470.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	22.62	38.78
VIT_10s0003g02400.t01	Wine grape	cytosol	32.43	38.76
VIT_10s0003g02330.t01	Wine grape	plastid	37.33	38.16
VIT_10s0003g02290.t01	Wine grape	plastid	37.06	37.88
VIT_02s0012g00410.t01	Wine grape	plastid	35.15	37.28
VIT_10s0003g02390.t01	Wine grape	cytosol	36.51	37.02
VIT_10s0003g02300.t01	Wine grape	cytosol	36.24	36.74
VIT_16s0022g00420.t01	Wine grape	cytosol, nucleus, peroxisome, plastid	36.24	36.24
VIT_11s0118g00400.t01	Wine grape	peroxisome	26.98	36.13
VIT_02s0012g00380.t01	Wine grape	cytosol	26.16	35.96
VIT_11s0118g00370.t01	Wine grape	plastid	31.34	35.71
VIT_11s0118g00390.t01	Wine grape	cytosol, nucleus, peroxisome	34.33	35.39
VIT_16s0022g00430.t01	Wine grape	plastid	37.06	35.32
VIT_09s0002g08090.t01	Wine grape	cytosol, nucleus, peroxisome	32.7	34.09
VIT_11s0118g00360.t01	Wine grape	cytosol	36.24	33.42
VIT_03s0091g01080.t01	Wine grape	cytosol	29.97	29.65
VIT_08s0007g00750.t01	Wine grape	cytosol, nucleus, peroxisome	55.86	29.24
VIT_10s0003g02430.t01	Wine grape	cytosol, nucleus, peroxisome	38.69	28.86
VIT_10s0003g02320.t01	Wine grape	cytosol, golgi, peroxisome	25.61	21.08

Protein Annotations

EntrezGene:100242772	wikigene:100242772	Gene3D:2.60.120.330	MapMan:50.1.13	ProteinID:CBI31645	ProteinID:CBI31645.3
UniProt:D7TLQ8	InterPro:DIOX_N	EMBL:FN595998	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like
InterPro:IPR005123	InterPro:IPR027443	EntrezGene:LOC100242772	wikigene:LOC100242772	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF132	SUPFAM:SSF51197	UniParc:UPI00015C986B
ArrayExpress:VIT_13s0019g02010	EnsemblPlantsGene:VIT_13s0019g02010	EnsemblPlants:VIT_13s0019g02010.t01	RefSeq:XP_002278096	RefSeq:XP_002278096.2	RefSeq:XP_002278096.3

Description

No Description!

Coordinates

chr13:-:3328970..3330424

Molecular Weight (calculated)

41667.0 Da

IEP (calculated)

5.314

GRAVY (calculated)

-0.408

Length

367 amino acids

Sequence
(BLAST)

001: MDTKAENGVM QEHQELGWGK SLPVPSVQEI VKNDSQSVPE RYIQEHKNRP LGSDSCPVSS QIPIIDLHLL ACGDEDERTK LNFACKEWGF FQVINHGVAE
101: EVLQKMKTAV AAFFELPLEE KKKYSMAEND LQGYGQGYVV SDQQKLDWGD LIFLLTLPNK YKKMKYWPVT VTGFKEGIEE YATEMHKVTE EILGNLSLLM
201: GMDKDGLRLL HAEMKQAMRL NYYPTCSRPD LVLGVSPHSD ASSITVLLQD DEITGLQIRH KGGWVPVKPI PNALVVNIGD AIEAWNNGMY KSIEHRAVTN
301: EKRARMSIAT FLIPEDDVEI GPVDSVVGTY HQPVMYKKIK YVDYLRYTLS REMDGKAHTE FLKLENE

Best Arabidopsis Sequence Match ( AT3G21420.1 )
(BLAST)

001: MAPLPISSIR VGKIDDVQEL IKSKPNKVPE RFIREEYERG VVVSSLKTHH LHHQIPVIDL SKLSKPDNDD FFFEILKLSQ ACEDWGFFQV INHGIEVEVV
101: EDIEEVASEF FDMPLEEKKK YPMEPGTVQG YGQAFIFSED QKLDWCNMFA LGVHPPQIRN PKLWPSKPAR FSESLEGYSK EIRELCKRLL KYIAISLGLK
201: EERFEEMFGE AVQAVRMNYY PPCSSPDLVL GLSPHSDGSA LTVLQQSKNS CVGLQILKDN TWVPVKPLPN ALVINIGDTI EVLSNGKYKS VEHRAVTNRE
301: KERLTIVTFY APNYEVEIEP MSELVDDETN PCKYRSYNHG DYSYHYVSNK LQGKKSLDFA KILN

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LIF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.