Factsheet for VIT_10s0003g02320.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0003g02260.t01	Wine grape	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	32.06	76.47
VIT_10s0003g02350.t01	Wine grape	cytosol	51.57	76.41
VIT_10s0003g02340.t01	Wine grape	cytosol	52.02	75.57
VIT_10s0003g02400.t01	Wine grape	cytosol	51.57	74.92
VIT_10s0003g02360.t01	Wine grape	cytosol	50.9	74.67
VIT_10s0003g02380.t01	Wine grape	cytosol	34.53	67.54
VIT_10s0003g02280.t01	Wine grape	cytosol	44.17	64.17
VIT_10s0003g02300.t01	Wine grape	cytosol	52.02	64.09
VIT_10s0003g02390.t01	Wine grape	cytosol	51.35	63.26
VIT_10s0003g02330.t01	Wine grape	plastid	50.67	62.95
VIT_10s0003g02290.t01	Wine grape	plastid	50.67	62.95
VIT_10s0003g02420.t01	Wine grape	cytosol	18.16	57.45
VIT_10s0003g02470.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	24.89	51.87
VIT_16s0022g00420.t01	Wine grape	cytosol, nucleus, peroxisome, plastid	41.03	49.86
PGSC0003DMT400059406	Potato	peroxisome	26.68	48.77
VIT_16s0022g00430.t01	Wine grape	plastid	41.26	47.79
KRH11118	Soybean	cytosol, nucleus, peroxisome, plastid	35.43	42.47
KRH58593	Soybean	cytosol, peroxisome, plastid	34.53	42.42
VIT_02s0012g00440.t01	Wine grape	extracellular	12.33	41.98
VIT_15s0021g00950.t01	Wine grape	cytosol	30.27	38.79
VIT_15s0021g00960.t01	Wine grape	cytosol	31.39	38.46
VIT_10s0003g02450.t01	Wine grape	cytosol	31.39	38.25
KRH21128	Soybean	cytosol	23.09	37.45
VIT_02s0012g00450.t01	Wine grape	cytosol, nucleus, peroxisome	25.34	32.01
VIT_02s0012g00390.t01	Wine grape	cytosol	25.11	31.73
VIT_02s0012g00400.t01	Wine grape	cytosol, peroxisome, plastid	23.99	30.92
VIT_02s0012g00360.t01	Wine grape	cytosol	23.09	30.65
VIT_02s0012g00320.t01	Wine grape	cytosol	18.16	29.67
VIT_11s0118g00400.t01	Wine grape	peroxisome	17.49	28.47
VIT_10s0003g02430.t01	Wine grape	cytosol, nucleus, peroxisome	30.27	27.44
VIT_02s0012g00350.t01	Wine grape	cytosol	20.63	26.59
VIT_11s0118g00390.t01	Wine grape	cytosol, nucleus, peroxisome	21.08	26.4
VIT_11s0118g00370.t01	Wine grape	plastid	18.83	26.09
VIT_13s0019g02010.t01	Wine grape	cytosol	21.08	25.61
VIT_05s0020g01310.t01	Wine grape	cytosol	20.85	25.48
VIT_03s0091g01080.t01	Wine grape	cytosol	21.08	25.34
VIT_09s0002g08090.t01	Wine grape	cytosol, nucleus, peroxisome	19.96	25.28
VIT_02s0012g00380.t01	Wine grape	cytosol	14.8	24.72
VIT_02s0012g00410.t01	Wine grape	plastid	18.61	23.99
VIT_11s0118g00360.t01	Wine grape	cytosol	20.63	23.12
VIT_08s0007g00750.t01	Wine grape	cytosol, nucleus, peroxisome	21.08	13.41

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	ProteinID:CBI30784	ProteinID:CBI30784.3	UniProt:D7TJW2	InterPro:DIOX_N
EMBL:FN595992	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF370	SUPFAM:SSF51197	TMHMM:TMhelix	UniParc:UPI0001BE3902
ArrayExpress:VIT_10s0003g02320	EnsemblPlantsGene:VIT_10s0003g02320	EnsemblPlants:VIT_10s0003g02320.t01	SEG:seg	:	:

Description

No Description!

Coordinates

chr10:-:4143873..4165767

Molecular Weight (calculated)

51066.4 Da

IEP (calculated)

6.431

GRAVY (calculated)

-0.068

Length

446 amino acids

Sequence
(BLAST)

001: MKHLIMSETA GSELEKLHST CKEWGFFPLV NHGVRSSLVL YDNQPYTYKE AYLLPELPSL LRDSLECYLA ELQKLAMMLL GFMAKALKLE KGEMEELFED
101: GMQSVRITYY PPCPQPELVM GLTPHSDATG ITILLQINGV DGLQIKKDGV WIPVSFLPDA LVVNVGDVLE ILSNGVYTSI EHRATVNAAK ERISIAMFFN
201: PKFSAQTKPA PSQINPQNPP LFKQVGMEKY FKDFFSRKLD GKSYLWFNRS LKLGQLTMAS TQFPSFRAAP VQSVQELIKE PIPAVPQPFI LDDPQSPILS
301: ASTPLPLLPT IDMKHIIMSE TADAELEKLH STCKEWGFFQ LVNHGVSSSL VEKLKSEIGE FYKLPWEERI KYKMRPRDFE GYGLSPIRSE DQKLDWGDRF
401: YMTTNPIHTR KPYLLPELPP SLRFCLIIII FFFFFFFFQL YICFLL

Best Arabidopsis Sequence Match ( AT1G17010.1 )
(BLAST)

001: MEAKEETPWS SILVPSVQEM VKDKMITTVP PRYVRYDQDK TEVVVHDSGL ISEIPIIDMN RLCSSTAVDS EVEKLDFACK EYGFFQLVNH GIDPSFLDKI
101: KSEIQDFFNL PMEEKKKLWQ TPAVMEGFGQ AFVVSEDQKL DWADLFFLIM QPVQLRKRHL FPKLPLPFRD TLDMYSTRVK SIAKILLAKM AKALQIKPEE
201: VEEIFGDDMM QSMRMNYYPP CPQPNLVTGL IPHSDAVGLT ILLQVNEVDG LQIKKNGKWF FVKPLQNAFI VNVGDVLEII TNGTYRSIEH RAMVNLEKER
301: LSIATFHNTG MDKEIGPARS LVQRQEAAKF RSLKTKDYLN GLFSRELKGK AYLDAMRIEG K

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I629]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.