Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 3
- peroxisome 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
VIT_10s0003g02290.t01 | Wine grape | plastid | 99.16 | 99.16 |
VIT_10s0003g02360.t01 | Wine grape | cytosol | 83.01 | 98.03 |
VIT_10s0003g02350.t01 | Wine grape | cytosol | 79.94 | 95.35 |
VIT_10s0003g02340.t01 | Wine grape | cytosol | 80.78 | 94.46 |
VIT_10s0003g02380.t01 | Wine grape | cytosol | 59.61 | 93.86 |
VIT_10s0003g02390.t01 | Wine grape | cytosol | 94.43 | 93.65 |
VIT_10s0003g02300.t01 | Wine grape | cytosol | 94.15 | 93.37 |
VIT_10s0003g02400.t01 | Wine grape | cytosol | 79.67 | 93.16 |
VIT_10s0003g02280.t01 | Wine grape | cytosol | 70.75 | 82.74 |
VIT_10s0003g02260.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 40.95 | 78.61 |
VIT_16s0022g00420.t01 | Wine grape | cytosol, nucleus, peroxisome, plastid | 72.98 | 71.39 |
VIT_16s0022g00430.t01 | Wine grape | plastid | 73.82 | 68.83 |
KRH11118 | Soybean | cytosol, nucleus, peroxisome, plastid | 63.79 | 61.56 |
KRH58593 | Soybean | cytosol, peroxisome, plastid | 60.45 | 59.78 |
PGSC0003DMT400059406 | Potato | peroxisome | 40.11 | 59.02 |
KRH21128 | Soybean | cytosol | 45.13 | 58.91 |
VIT_10s0003g02420.t01 | Wine grape | cytosol | 22.56 | 57.45 |
VIT_10s0003g02470.t01 | Wine grape | cytosol, mitochondrion, peroxisome, plastid | 33.43 | 56.07 |
VIT_15s0021g00950.t01 | Wine grape | cytosol | 53.2 | 54.89 |
VIT_15s0021g00960.t01 | Wine grape | cytosol | 54.87 | 54.12 |
VIT_10s0003g02450.t01 | Wine grape | cytosol | 52.37 | 51.37 |
VIT_10s0003g02320.t01 | Wine grape | cytosol, golgi, peroxisome | 62.95 | 50.67 |
VIT_02s0012g00440.t01 | Wine grape | extracellular | 16.71 | 45.8 |
VIT_02s0012g00450.t01 | Wine grape | cytosol, nucleus, peroxisome | 44.29 | 45.04 |
VIT_02s0012g00320.t01 | Wine grape | cytosol | 33.7 | 44.32 |
VIT_02s0012g00390.t01 | Wine grape | cytosol | 42.62 | 43.34 |
VIT_02s0012g00360.t01 | Wine grape | cytosol | 40.39 | 43.15 |
VIT_02s0012g00400.t01 | Wine grape | cytosol, peroxisome, plastid | 40.39 | 41.91 |
VIT_02s0012g00380.t01 | Wine grape | cytosol | 30.08 | 40.45 |
VIT_11s0118g00400.t01 | Wine grape | peroxisome | 29.8 | 39.05 |
VIT_02s0012g00350.t01 | Wine grape | cytosol | 37.33 | 38.73 |
VIT_05s0020g01310.t01 | Wine grape | cytosol | 38.72 | 38.08 |
VIT_11s0118g00370.t01 | Wine grape | plastid | 33.98 | 37.89 |
VIT_11s0118g00390.t01 | Wine grape | cytosol, nucleus, peroxisome | 37.33 | 37.64 |
VIT_13s0019g02010.t01 | Wine grape | cytosol | 38.16 | 37.33 |
VIT_09s0002g08090.t01 | Wine grape | cytosol, nucleus, peroxisome | 36.21 | 36.93 |
VIT_10s0003g02430.t01 | Wine grape | cytosol, nucleus, peroxisome | 49.86 | 36.38 |
VIT_02s0012g00410.t01 | Wine grape | plastid | 33.7 | 34.97 |
VIT_03s0091g01080.t01 | Wine grape | cytosol | 35.1 | 33.96 |
VIT_11s0118g00360.t01 | Wine grape | cytosol | 37.05 | 33.42 |
VIT_08s0007g00750.t01 | Wine grape | cytosol, nucleus, peroxisome | 36.21 | 18.54 |
Protein Annotations
EntrezGene:100257293 | wikigene:100257293 | EntrezGene:100264195 | wikigene:100264195 | EntrezGene:100267456 | wikigene:100267456 |
Gene3D:2.60.120.330 | MapMan:50.1.13 | EMBL:AM427728 | EMBL:AM465590 | ProteinID:CAN72515 | ProteinID:CAN72515.1 |
ProteinID:CAN73448 | ProteinID:CAN73448.1 | ProteinID:CCB55742 | ProteinID:CCB55742.1 | ncoils:Coil | InterPro:DIOX_N |
UniProt:F6HMF3 | EMBL:FN595992 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPNS-like | InterPro:IPR005123 |
InterPro:IPR027443 | EntrezGene:LOC100257293 | wikigene:LOC100257293 | EntrezGene:LOC100264195 | wikigene:LOC100264195 | EntrezGene:LOC100267456 |
wikigene:LOC100267456 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 | PANTHER:PTHR10209 |
PANTHER:PTHR10209:SF370 | SUPFAM:SSF51197 | UniParc:UPI00015CC5D1 | ArrayExpress:VIT_10s0003g02330 | EnsemblPlantsGene:VIT_10s0003g02330 | EnsemblPlants:VIT_10s0003g02330.t01 |
RefSeq:XP_002270288 | RefSeq:XP_002270288.1 | : | : | : | : |
Description
No Description!
Coordinates
chr10:+:4182039..4184353
Molecular Weight (calculated)
40453.3 Da
IEP (calculated)
5.701
GRAVY (calculated)
-0.230
Length
359 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTQFSSIR AAPVQSVQEL IKEPIPAVPQ PFILDDPQPP ILSASTPLPQ LPTIDMKHLI MSETAGSELE KLHSTCKEWG FFQLVNHGVS SSFMEKLKSE
101: IGEFYKLPLE ERMKYKMRPG DVEGYGLSPI RSEDQKLDWG DRFYMTTNPI HTRKPYLLPE LPPSLRDSLE CYLAELQKLV MMLLGFMAKA LKLEKGEMEE
201: LFEDGMQSVR MTYYPPCPQP ELVMGLTPHS DATGITILLQ INGVDGLQIK KDGVWIPVSF LPDALVVNVG DILEILSNGV YTSIEHRATV NAAKERISIA
301: MFFNPKSSAQ IKPAASLINP QNPPLFKQVG MEKYFKDFFS RKLDGKSYLE HMKIKNEEA
101: IGEFYKLPLE ERMKYKMRPG DVEGYGLSPI RSEDQKLDWG DRFYMTTNPI HTRKPYLLPE LPPSLRDSLE CYLAELQKLV MMLLGFMAKA LKLEKGEMEE
201: LFEDGMQSVR MTYYPPCPQP ELVMGLTPHS DATGITILLQ INGVDGLQIK KDGVWIPVSF LPDALVVNVG DILEILSNGV YTSIEHRATV NAAKERISIA
301: MFFNPKSSAQ IKPAASLINP QNPPLFKQVG MEKYFKDFFS RKLDGKSYLE HMKIKNEEA
001: MEAEGEKQWS SLIVPFVLEI VKEKNFTTIP PRYVRVDQEK TEILNDSSLS SEIPVIDMTR LCSVSAMDSE LKKLDFACQD WGFFQLVNHG IDSSFLEKLE
101: TEVQEFFNLP MKEKQKLWQR SGEFEGFGQV NIVSENQKLD WGDMFILTTE PIRSRKSHLF SKLPPPFRET LETYSSEVKS IAKILFAKMA SVLEIKHEEM
201: EDLFDDVWQS IKINYYPPCP QPDQVMGLTQ HSDAAGLTIL LQVNQVEGLQ IKKDGKWVVV KPLRDALVVN VGEILEIITN GRYRSIEHRA VVNSEKERLS
301: VAMFHSPGKE TIIRPAKSLV DRQKQCLFKS MSTQEYFDAF FTQKLNGKSH LDLMRI
101: TEVQEFFNLP MKEKQKLWQR SGEFEGFGQV NIVSENQKLD WGDMFILTTE PIRSRKSHLF SKLPPPFRET LETYSSEVKS IAKILFAKMA SVLEIKHEEM
201: EDLFDDVWQS IKINYYPPCP QPDQVMGLTQ HSDAAGLTIL LQVNQVEGLQ IKKDGKWVVV KPLRDALVVN VGEILEIITN GRYRSIEHRA VVNSEKERLS
301: VAMFHSPGKE TIIRPAKSLV DRQKQCLFKS MSTQEYFDAF FTQKLNGKSH LDLMRI
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SYM7]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.