Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13681 | Canola | cytosol, mitochondrion | 62.61 | 72.0 |
| AT3G27100.1 | Thale cress | cytosol | 68.7 | 68.7 |
| CDY52397 | Canola | cytosol | 67.83 | 62.4 |
| KRH06944 | Soybean | cytosol | 50.43 | 50.88 |
| Solyc02g068110.2.1 | Tomato | cytosol | 31.3 | 50.7 |
| KRG94523 | Soybean | cytosol | 49.57 | 50.0 |
| Bra039092.1-P | Field mustard | cytosol | 68.7 | 48.47 |
| KXG34000 | Sorghum | cytosol | 46.09 | 47.32 |
| Os01t0920200-01 | Rice | cytosol | 46.09 | 46.9 |
| Zm00001d012030_P003 | Maize | plastid | 46.09 | 44.54 |
| PGSC0003DMT400017833 | Potato | cytosol | 49.57 | 44.53 |
| TraesCS3B01G464700.1 | Wheat | cytosol, nucleus, plastid | 44.35 | 43.97 |
| TraesCS3A01G427600.1 | Wheat | cytosol | 43.48 | 43.1 |
| TraesCS3D01G423200.1 | Wheat | cytosol, nucleus, plastid | 43.48 | 43.1 |
| VIT_14s0068g02060.t01 | Wine grape | mitochondrion | 46.96 | 42.52 |
| Zm00001d042340_P001 | Maize | mitochondrion | 46.09 | 38.13 |
| GSMUA_Achr8P00800_001 | Banana | cytosol | 46.09 | 31.55 |
| HORVU3Hr1G094220.7 | Barley | nucleus, plastid | 41.74 | 27.75 |
Protein Annotations
| Gene3D:1.10.246.140 | MapMan:15.3.4.2.3 | EnsemblPlantsGene:Bra025249 | EnsemblPlants:Bra025249.1 | EnsemblPlants:Bra025249.1-P | GO:GO:0000124 |
| GO:GO:0003674 | GO:GO:0003713 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005635 | GO:GO:0005643 | GO:GO:0005654 | GO:GO:0006139 | GO:GO:0006406 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045893 | InterPro:IPR038212 |
| UniProt:M4E8Z3 | PFAM:PF10163 | PANTHER:PTHR12514 | InterPro:TF_ENY2 | InterPro:TF_EnY2_sf | UniParc:UPI000253F616 |
Description
AT3G27100 (E=1e-038) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 157 Blast hits to 157 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 121; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Coordinates
chrA06:+:22580125..22580705
Molecular Weight (calculated)
13426.2 Da
IEP (calculated)
8.752
GRAVY (calculated)
-0.810
Length
115 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVCFLSRKH SVNRSSVPDE DVTDASSEKD KLTLEEIINI KLVESGEREN LMELVRDRLV ESGWKDEMRV ACREHVKKKG RKDVTVDELI RVITPKGRER
101: YTNPFGMKPE QRNLR
101: YTNPFGMKPE QRNLR
001: MKHSVNRPPT PDEDDVADGF EKDKVTLREI INVKLVESGE KENLMELVRD RLVECGWKDE MRIACREHVK KKGRKDVTVD ELIRVITPKG RASVPDSVKA
101: ELLNRIQNFI VSAAL
101: ELLNRIQNFI VSAAL
Arabidopsis Description
Transcription and mRNA export factor SUS1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NQ54]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.