Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G423200.1 | Wheat | cytosol, nucleus, plastid | 97.41 | 97.41 |
| TraesCS3A01G427600.1 | Wheat | cytosol | 95.69 | 95.69 |
| KXG34000 | Sorghum | cytosol | 81.9 | 84.82 |
| Os01t0920200-01 | Rice | cytosol | 79.31 | 81.42 |
| Zm00001d012030_P003 | Maize | plastid | 78.45 | 76.47 |
| Solyc02g068110.2.1 | Tomato | cytosol | 46.55 | 76.06 |
| KRH06944 | Soybean | cytosol | 64.66 | 65.79 |
| KRG94523 | Soybean | cytosol | 62.93 | 64.04 |
| VIT_14s0068g02060.t01 | Wine grape | mitochondrion | 69.83 | 63.78 |
| CDY00167 | Canola | cytosol | 52.59 | 63.54 |
| HORVU3Hr1G094220.7 | Barley | nucleus, plastid | 92.24 | 61.85 |
| AT3G27100.1 | Thale cress | cytosol | 60.34 | 60.87 |
| CDY20061 | Canola | cytosol, mitochondrion, nucleus | 59.48 | 58.47 |
| Zm00001d042340_P001 | Maize | mitochondrion | 68.1 | 56.83 |
| GSMUA_Achr8P00800_001 | Banana | cytosol | 76.72 | 52.98 |
| PGSC0003DMT400017833 | Potato | cytosol | 55.17 | 50.0 |
| CDY13681 | Canola | cytosol, mitochondrion | 38.79 | 45.0 |
| Bra025249.1-P | Field mustard | cytosol | 43.97 | 44.35 |
| Bra039092.1-P | Field mustard | cytosol | 61.21 | 43.56 |
| CDY52397 | Canola | cytosol | 38.79 | 36.0 |
Protein Annotations
| Gene3D:1.10.246.140 | MapMan:15.3.4.2.3 | GO:GO:0000124 | GO:GO:0003674 | GO:GO:0003713 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005635 | GO:GO:0005643 | GO:GO:0005654 |
| GO:GO:0006139 | GO:GO:0006406 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045893 | InterPro:IPR038212 | HAMAP:MF_03046 | PFAM:PF10163 | PANTHER:PTHR12514 |
| InterPro:TF_ENY2 | InterPro:TF_EnY2_sf | EnsemblPlantsGene:TraesCS3B01G464700 | EnsemblPlants:TraesCS3B01G464700.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr3B:-:707415731..707418135
Molecular Weight (calculated)
13341.0 Da
IEP (calculated)
5.321
GRAVY (calculated)
-0.653
Length
116 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSSINRPPT PDQDDDEEEE QGKEASLGDI INLKLVESGE KERLMELLRE RLVECGWRDD MKALCRAYAR KKGRNNVTLD DLIHVITPKG RASVPDAVKA
101: ELLQRIRSFL MSFSLW
101: ELLQRIRSFL MSFSLW
001: MKHSVNRPPT PDEDDVADGF EKDKVTLREI INVKLVESGE KENLMELVRD RLVECGWKDE MRIACREHVK KKGRKDVTVD ELIRVITPKG RASVPDSVKA
101: ELLNRIQNFI VSAAL
101: ELLNRIQNFI VSAAL
Arabidopsis Description
Transcription and mRNA export factor SUS1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NQ54]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.