Subcellular Localization
min:
: max
Winner_takes_all: cytosol, mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 3
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025249.1-P | Field mustard | cytosol | 72.0 | 62.61 |
| AT3G27100.1 | Thale cress | cytosol | 64.0 | 55.65 |
| CDY00167 | Canola | cytosol | 53.0 | 55.21 |
| CDY20061 | Canola | cytosol, mitochondrion, nucleus | 65.0 | 55.08 |
| CDY52397 | Canola | cytosol | 60.0 | 48.0 |
| KRH06944 | Soybean | cytosol | 49.0 | 42.98 |
| KRG94523 | Soybean | cytosol | 48.0 | 42.11 |
| KXG34000 | Sorghum | cytosol | 47.0 | 41.96 |
| Os01t0920200-01 | Rice | cytosol | 45.0 | 39.82 |
| PGSC0003DMT400017833 | Potato | cytosol | 50.0 | 39.06 |
| TraesCS3B01G464700.1 | Wheat | cytosol, nucleus, plastid | 45.0 | 38.79 |
| Solyc02g068110.2.1 | Tomato | cytosol | 27.0 | 38.03 |
| TraesCS3A01G427600.1 | Wheat | cytosol | 44.0 | 37.93 |
| TraesCS3D01G423200.1 | Wheat | cytosol, nucleus, plastid | 44.0 | 37.93 |
| Zm00001d012030_P003 | Maize | plastid | 45.0 | 37.82 |
| VIT_14s0068g02060.t01 | Wine grape | mitochondrion | 48.0 | 37.8 |
| Zm00001d042340_P001 | Maize | mitochondrion | 45.0 | 32.37 |
| GSMUA_Achr8P00800_001 | Banana | cytosol | 46.0 | 27.38 |
| HORVU3Hr1G094220.7 | Barley | nucleus, plastid | 42.0 | 24.28 |
Protein Annotations
| Gene3D:1.10.246.140 | MapMan:15.3.4.2.3 | UniProt:A0A078FKL7 | EnsemblPlants:CDY13681 | ProteinID:CDY13681 | ProteinID:CDY13681.1 |
| GO:GO:0000124 | GO:GO:0003674 | GO:GO:0003713 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005635 | GO:GO:0005643 | GO:GO:0005654 | GO:GO:0006139 | GO:GO:0006406 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045893 |
| EnsemblPlantsGene:GSBRNA2T00078105001 | InterPro:IPR038212 | PFAM:PF10163 | PANTHER:PTHR12514 | InterPro:TF_ENY2 | InterPro:TF_EnY2_sf |
| UniParc:UPI0004EE8684 | : | : | : | : | : |
Description
BnaA06g32420DBnaA06g32420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FKL7]
Coordinates
chrLK032037:-:569629..570174
Molecular Weight (calculated)
11588.9 Da
IEP (calculated)
5.787
GRAVY (calculated)
-0.498
Length
100 amino acids
Sequence
(BLAST)
(BLAST)
1: MLCHLLSSSR VCWRYSVNRF PVPDEDVTDA SSEKDKLTLG EIINIKLVES GEKDNLMELV RERLVESGWK DEREHVKKKG RKDVTVDELI RVYTIQTLLG
001: MKHSVNRPPT PDEDDVADGF EKDKVTLREI INVKLVESGE KENLMELVRD RLVECGWKDE MRIACREHVK KKGRKDVTVD ELIRVITPKG RASVPDSVKA
101: ELLNRIQNFI VSAAL
101: ELLNRIQNFI VSAAL
Arabidopsis Description
Transcription and mRNA export factor SUS1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NQ54]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.