Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
22065420
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG34000 | Sorghum | cytosol | 90.76 | 96.43 |
| Os01t0920200-01 | Rice | cytosol | 79.83 | 84.07 |
| TraesCS3D01G423200.1 | Wheat | cytosol, nucleus, plastid | 78.15 | 80.17 |
| TraesCS3B01G464700.1 | Wheat | cytosol, nucleus, plastid | 76.47 | 78.45 |
| TraesCS3A01G427600.1 | Wheat | cytosol | 75.63 | 77.59 |
| Solyc02g068110.2.1 | Tomato | cytosol | 46.22 | 77.46 |
| KRH06944 | Soybean | cytosol | 67.23 | 70.18 |
| Zm00001d042340_P001 | Maize | mitochondrion | 81.51 | 69.78 |
| KRG94523 | Soybean | cytosol | 65.55 | 68.42 |
| VIT_14s0068g02060.t01 | Wine grape | mitochondrion | 69.75 | 65.35 |
| CDY00167 | Canola | cytosol | 50.42 | 62.5 |
| AT3G27100.1 | Thale cress | cytosol | 57.14 | 59.13 |
| CDY20061 | Canola | cytosol, mitochondrion, nucleus | 56.3 | 56.78 |
| GSMUA_Achr8P00800_001 | Banana | cytosol | 77.31 | 54.76 |
| HORVU3Hr1G094220.7 | Barley | nucleus, plastid | 74.79 | 51.45 |
| PGSC0003DMT400017833 | Potato | cytosol | 52.94 | 49.22 |
| Bra025249.1-P | Field mustard | cytosol | 44.54 | 46.09 |
| CDY13681 | Canola | cytosol, mitochondrion | 37.82 | 45.0 |
| Bra039092.1-P | Field mustard | cytosol | 58.82 | 42.94 |
| CDY52397 | Canola | cytosol | 36.13 | 34.4 |
Protein Annotations
| Gene3D:1.10.246.140 | MapMan:15.3.4.2.3 | UniProt:A0A1D6G5X6 | ProteinID:AQK98613.1 | GO:GO:0000124 | GO:GO:0003674 |
| GO:GO:0003713 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005635 |
| GO:GO:0005643 | GO:GO:0005654 | GO:GO:0006139 | GO:GO:0006325 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0006368 | GO:GO:0006406 | GO:GO:0006464 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015031 | GO:GO:0016043 | GO:GO:0016569 | GO:GO:0016578 |
| GO:GO:0019538 | GO:GO:0045893 | GO:GO:0051028 | GO:GO:0070390 | GO:GO:0071819 | InterPro:IPR038212 |
| HAMAP:MF_03046 | PFAM:PF10163 | PANTHER:PTHR12514 | InterPro:TF_ENY2 | InterPro:TF_EnY2_sf | UniParc:UPI0008457F52 |
| EnsemblPlantsGene:Zm00001d012030 | EnsemblPlants:Zm00001d012030_P003 | EnsemblPlants:Zm00001d012030_T003 | SEG:seg | : | : |
Description
E2 protein isoform 5
Coordinates
chr8:+:166780957..166784066
Molecular Weight (calculated)
13663.6 Da
IEP (calculated)
10.338
GRAVY (calculated)
-0.674
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MRWGDGFRRA SINRPPTPSA EEDRDKQPSL GEIINIKLVE TGEKEKLMEL LRERLAECGW RDEMKALCRA YARKKGRNNV TVDDLIHVIT PKGRASVPDS
101: VKAELLQRIR SFLMSTTLR
101: VKAELLQRIR SFLMSTTLR
001: MKHSVNRPPT PDEDDVADGF EKDKVTLREI INVKLVESGE KENLMELVRD RLVECGWKDE MRIACREHVK KKGRKDVTVD ELIRVITPKG RASVPDSVKA
101: ELLNRIQNFI VSAAL
101: ELLNRIQNFI VSAAL
Arabidopsis Description
Transcription and mRNA export factor SUS1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NQ54]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.