Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025249.1-P | Field mustard | cytosol | 62.4 | 67.83 |
| CDY00167 | Canola | cytosol | 48.0 | 62.5 |
| CDY13681 | Canola | cytosol, mitochondrion | 48.0 | 60.0 |
| CDY20061 | Canola | cytosol, mitochondrion, nucleus | 53.6 | 56.78 |
| AT3G27100.1 | Thale cress | cytosol | 48.0 | 52.17 |
| KXG34000 | Sorghum | cytosol | 36.8 | 41.07 |
| KRG94523 | Soybean | cytosol | 36.0 | 39.47 |
| KRH06944 | Soybean | cytosol | 36.0 | 39.47 |
| Os01t0920200-01 | Rice | cytosol | 35.2 | 38.94 |
| TraesCS3B01G464700.1 | Wheat | cytosol, nucleus, plastid | 36.0 | 38.79 |
| TraesCS3A01G427600.1 | Wheat | cytosol | 35.2 | 37.93 |
| TraesCS3D01G423200.1 | Wheat | cytosol, nucleus, plastid | 35.2 | 37.93 |
| Solyc02g068110.2.1 | Tomato | cytosol | 20.8 | 36.62 |
| Zm00001d012030_P003 | Maize | plastid | 34.4 | 36.13 |
| VIT_14s0068g02060.t01 | Wine grape | mitochondrion | 34.4 | 33.86 |
| PGSC0003DMT400017833 | Potato | cytosol | 34.4 | 33.59 |
| Zm00001d042340_P001 | Maize | mitochondrion | 36.0 | 32.37 |
| GSMUA_Achr8P00800_001 | Banana | cytosol | 35.2 | 26.19 |
| HORVU3Hr1G094220.7 | Barley | nucleus, plastid | 32.8 | 23.7 |
Protein Annotations
| Gene3D:1.10.246.140 | MapMan:15.3.4.2.3 | UniProt:A0A078IR12 | EnsemblPlants:CDY52397 | ProteinID:CDY52397 | ProteinID:CDY52397.1 |
| GO:GO:0000124 | GO:GO:0003674 | GO:GO:0003713 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005635 | GO:GO:0005643 | GO:GO:0005654 | GO:GO:0006139 | GO:GO:0006406 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045893 |
| EnsemblPlantsGene:GSBRNA2T00006842001 | InterPro:IPR038212 | PFAM:PF10163 | PANTHER:PTHR12514 | InterPro:TF_ENY2 | InterPro:TF_EnY2_sf |
| UniParc:UPI0004EDE4BB | : | : | : | : | : |
Description
BnaC07g48960DBnaC07g48960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IR12]
Coordinates
chrLK033083:+:18311..19024
Molecular Weight (calculated)
14284.2 Da
IEP (calculated)
6.003
GRAVY (calculated)
-0.542
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSSAFLLLE FAGKICDRSI KTDPFDFSEA TVTSPVPDED VTVASEKDEL TLGEIINIKL VESGEKDNLM ELVRDRLVES GRKDGMRVAC REHVKKKGRK
101: DVAVDELIRR YTNPFRMKPE QRNLR
101: DVAVDELIRR YTNPFRMKPE QRNLR
001: MKHSVNRPPT PDEDDVADGF EKDKVTLREI INVKLVESGE KENLMELVRD RLVECGWKDE MRIACREHVK KKGRKDVTVD ELIRVITPKG RASVPDSVKA
101: ELLNRIQNFI VSAAL
101: ELLNRIQNFI VSAAL
Arabidopsis Description
Transcription and mRNA export factor SUS1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NQ54]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.