CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH06944	Soybean	cytosol	94.74	94.74
Solyc02g068110.2.1	Tomato	cytosol	49.12	78.87
KXG34000	Sorghum	cytosol	69.3	70.54
VIT_14s0068g02060.t01	Wine grape	mitochondrion	77.19	69.29
Os01t0920200-01	Rice	cytosol	66.67	67.26
AT3G27100.1	Thale cress	cytosol	66.67	66.09
CDY00167	Canola	cytosol	55.26	65.62
Zm00001d012030_P003	Maize	plastid	68.42	65.55
TraesCS3D01G423200.1	Wheat	cytosol, nucleus, plastid	64.91	63.79
TraesCS3B01G464700.1	Wheat	cytosol, nucleus, plastid	64.04	62.93
TraesCS3A01G427600.1	Wheat	cytosol	63.16	62.07
CDY20061	Canola	cytosol, mitochondrion, nucleus	63.16	61.02
PGSC0003DMT400017833	Potato	cytosol	58.77	52.34
Zm00001d042340_P001	Maize	mitochondrion	62.28	51.08
GSMUA_Achr8P00800_001	Banana	cytosol	73.68	50.0
Bra025249.1-P	Field mustard	cytosol	50.0	49.57
CDY13681	Canola	cytosol, mitochondrion	42.11	48.0
Bra039092.1-P	Field mustard	cytosol	64.04	44.79
HORVU3Hr1G094220.7	Barley	nucleus, plastid	63.16	41.62
CDY52397	Canola	cytosol	39.47	36.0

Protein Annotations

Gene3D:1.10.246.140	EntrezGene:100527713	MapMan:15.3.4.2.3	EMBL:ACUP02011973	EMBL:BT092579	UniProt:C6T567
EnsemblPlantsGene:GLYMA_19G091000	GO:GO:0000124	GO:GO:0003674	GO:GO:0003682	GO:GO:0003713	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005635	GO:GO:0005643
GO:GO:0005654	GO:GO:0006139	GO:GO:0006325	GO:GO:0006351	GO:GO:0006355	GO:GO:0006357
GO:GO:0006368	GO:GO:0006406	GO:GO:0006464	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0015031	GO:GO:0016043	GO:GO:0016569	GO:GO:0016578
GO:GO:0016973	GO:GO:0019538	GO:GO:0045893	GO:GO:0051028	GO:GO:0070390	GO:GO:0071819
InterPro:IPR038212	EnsemblPlants:KRG94523	ProteinID:KRG94523	ProteinID:KRG94523.1	HAMAP:MF_03046	PFAM:PF10163
PANTHER:PTHR12514	InterPro:TF_ENY2	InterPro:TF_EnY2_sf	UniParc:UPI0001B15CAE	SEG:seg	:

Description

hypothetical protein

Coordinates

chr19:+:32332981..32335250

Molecular Weight (calculated)

12968.0 Da

IEP (calculated)

8.777

GRAVY (calculated)

-0.354

Length

114 amino acids

Sequence
(BLAST)

001: MKPKASVNRP PTPDVVENVP EREPTLQELI NIKLIETGEK ERLMELLRER LVDCGWKDEM ETLCRAVVKK KGRNNVTVDE LVHVITPKGR VSIPDSVKAE
101: LLQRIRTFLV SAAL

Best Arabidopsis Sequence Match ( AT3G27100.1 )
(BLAST)

001: MKHSVNRPPT PDEDDVADGF EKDKVTLREI INVKLVESGE KENLMELVRD RLVECGWKDE MRIACREHVK KKGRKDVTVD ELIRVITPKG RASVPDSVKA
101: ELLNRIQNFI VSAAL

Arabidopsis Description

Transcription and mRNA export factor SUS1 [Source:UniProtKB/Swiss-Prot;Acc:Q6NQ54]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.