Factsheet for Bra028838.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66969	Canola	extracellular	97.79	97.43
AT5G03350.1	Thale cress	extracellular	76.38	75.55
Bra027257.1-P	Field mustard	extracellular	61.62	60.51
Bra019014.1-P	Field mustard	extracellular	62.73	60.5
Bra021101.1-P	Field mustard	extracellular	59.41	58.33
Bra031794.1-P	Field mustard	extracellular	61.25	57.24
Bra019013.1-P	Field mustard	extracellular	50.92	50.0
Bra019012.1-P	Field mustard	extracellular	50.18	49.63
HORVU2Hr1G043510.1	Barley	extracellular	27.31	28.57
HORVU3Hr1G113660.1	Barley	extracellular, vacuole	28.78	22.87
HORVU5Hr1G036880.1	Barley	cytosol	15.13	22.53
HORVU7Hr1G009980.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	27.68	21.99
GSMUA_Achr6P33000_001	Banana	golgi	23.99	18.95
HORVU2Hr1G099010.1	Barley	cytosol	16.24	12.26
HORVU1Hr1G013700.1	Barley	plastid, vacuole	29.52	10.54

Protein Annotations

MapMan:18.4.1.19	Gene3D:2.60.120.200	EnsemblPlantsGene:Bra028838	EnsemblPlants:Bra028838.1	EnsemblPlants:Bra028838.1-P	InterPro:ConA-like_dom_sf
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006950	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536
GO:GO:0009605	GO:GO:0009607	GO:GO:0009627	GO:GO:0009719	GO:GO:0009987	GO:GO:0030246
GO:GO:0030312	GO:GO:0048046	GO:GO:0071446	InterPro:L-lectin	InterPro:Legume_lectin_dom	UniProt:M4EJ72
PFAM:PF00139	PIRSF:PIRSF002690	PANTHER:PTHR27007	PANTHER:PTHR27007:SF140	SUPFAM:SSF49899	SignalP:SignalP-noTM
UniParc:UPI000254301F	SEG:seg	:	:	:	:

Description

AT5G03350 (E=9e-116) | legume lectin family protein

Coordinates

chrA02:-:1811074..1811889

Molecular Weight (calculated)

29687.0 Da

IEP (calculated)

4.957

GRAVY (calculated)

-0.171

Length

271 amino acids

Sequence
(BLAST)

001: MQVQKLYFLA LFLAHTTLAV NLSLETSNIA FLGDAELGPA SDGVSRSGAL SMTRDENPLS HGQGLWATPV PFKPSSNTSS SLPYPFETSF VFSITPRTEP
101: APGHGLAFIV VPALDNSGAG PAGYLGILNK TNNGDPENHV FAVEFDVYKD KQLGDMNDNH VGVDVNSLTS VVAERAGYWV QIVIGRTKMW RFKEVELSNG
201: ERYKAWIEYR DSNVSVTLAP EAVTKPKKPL IVAQLDLSEV FLENMYAGFA GAMGREAERH DIWSWNFQNS A

Best Arabidopsis Sequence Match ( AT5G03350.1 )
(BLAST)

001: MKIHKLCFLA LLLAHTTSAV NLNLNLKTSE LVFLGDAELG PASDGVSRSG ALSMTRDENP FSHGQSLWST PVPFKPSSNS SSPYPFETSF TFSISTRIKP
101: APGHGLAFVV VPSIESDGPG PAGYLGIFNK TNNGNPKNHI FAVEFDVFQD KGFGDINDNH VGININSVTS VVAEKAGYWV QTGIGKMKHW SFKEFKLSNG
201: ERYKAWIEYR NSKVTVTLAP ETVKKPKKPL IVAHLDLSKV FLQNMYPGFS GAMGRGVERH DIWSWTFQNS AKRI

Arabidopsis Description

LLPLectin-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LZF5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.