Factsheet for Bra019013.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24119	Canola	mitochondrion, plastid	78.99	97.76
Bra019012.1-P	Field mustard	extracellular	82.97	83.58
AT1G53070.1	Thale cress	extracellular	76.09	77.21
Bra019014.1-P	Field mustard	extracellular	60.87	59.79
Bra031794.1-P	Field mustard	extracellular	58.33	55.52
Bra028838.1-P	Field mustard	extracellular	50.0	50.92
Bra027257.1-P	Field mustard	extracellular	50.0	50.0
Bra021101.1-P	Field mustard	extracellular	47.83	47.83
HORVU2Hr1G043510.1	Barley	extracellular	21.01	22.39
HORVU3Hr1G113660.1	Barley	extracellular, vacuole	23.19	18.77
HORVU5Hr1G036880.1	Barley	cytosol	12.32	18.68
GSMUA_Achr6P33000_001	Banana	golgi	23.19	18.66
HORVU7Hr1G009980.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	22.1	17.89
HORVU2Hr1G099010.1	Barley	cytosol	13.77	10.59
HORVU1Hr1G013700.1	Barley	plastid, vacuole	24.28	8.83

Protein Annotations

EnsemblPlants:Bra019013.1	EnsemblPlants:Bra019013.1-P	EnsemblPlantsGene:Bra019013	Gene3D:2.60.120.200	GO:GO:0003674	GO:GO:0005488
GO:GO:0030246	InterPro:ConA-like_dom_sf	InterPro:L-lectin	InterPro:Legume_lectin_dom	PANTHER:PTHR32401	PANTHER:PTHR32401:SF5
PFAM:PF00139	PIRSF:PIRSF002690	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF49899	UniParc:UPI000253E805
UniProt:M4DR70	MapMan:18.4.1.19	:	:	:	:

Description

AT1G53070 (E=4e-116) | legume lectin family protein

Coordinates

chrA06:-:760673..761503

Molecular Weight (calculated)

30721.3 Da

IEP (calculated)

8.402

GRAVY (calculated)

-0.143

Length

276 amino acids

Sequence
(BLAST)

001: MTMQTLCFIT LFIAISISQA TSAYRLQFNN FGINGSDLFS FHGDAEYGPD AGRMSRSGAL GLTQFRIPFS HGRAIYINPI TFKPPNNASS VYPFTTSFTF
101: SITPHNTNPI PGHGFAFLVV PRNQDDAASG LGYLSLVNRT SNGNPNNHLF AVEFDVFQDK YLHDINDNHV GIDINSVDSV TSVKSGYWVM TRSGWLFKYL
201: KLSSGDKYTA WIGYNNNLKV ISVTIGLAHL KKPNRPLIEA KYDLSSVLLE KMYAGFAGSM GRGVETHEVW DWTFQN

Best Arabidopsis Sequence Match ( AT1G53070.1 )
(BLAST)

001: MKIQILCFTT LFLAIFTSQV TTAYKFKFDY FGNGTDPISF HGDAEYGPDT DGKSRSGAIA LTRDNIPFSH GRAIFTTPIT FKPNASALYP FKTSFTFSIT
101: PKTNPNQGHG LAFIVVPSNQ NDAGSGLGYL SLLNRTNNGN PNNHLFAVEF DVFQDKSLGD MNDNHVGIDI NSVDSVVSVK SGYWVMTRSG WLFKDLKLSS
201: GDRYKAWIEY NNNYKVVSVT IGLAHLKKPN RPLIEAKFDL SKVIHEVMYT GFAGSMGRGV ERHEIWDWTF QN

Arabidopsis Description

Lectin-like protein At1g53070 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNN2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.