Factsheet for GSMUA_Achr6P33000_001

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
mitochondrion 3
golgi 3
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G043510.1	Barley	extracellular	30.9	40.93
HORVU5Hr1G036880.1	Barley	cytosol	20.99	39.56
HORVU3Hr1G113660.1	Barley	extracellular, vacuole	35.57	35.78
HORVU7Hr1G009980.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	34.69	34.9
AT1G53080.1	Thale cress	extracellular	21.57	26.15
Bra021101.1-P	Field mustard	extracellular	20.7	25.72
AT1G53060.1	Thale cress	cytosol, nucleus, plastid	18.08	25.62
CDY24119	Canola	mitochondrion, plastid	16.62	25.56
CDY72663	Canola	extracellular	19.83	25.47
Bra027257.1-P	Field mustard	extracellular	20.41	25.36
CDY21835	Canola	extracellular	20.41	25.36
CDX97656	Canola	extracellular	20.41	25.36
AT3G15356.1	Thale cress	extracellular	19.83	25.09
CDY20121	Canola	extracellular	20.12	25.0
CDY24118	Canola	extracellular	20.41	24.91
CDY24120	Canola	extracellular	19.83	24.82
AT5G03350.1	Thale cress	extracellular	19.83	24.82
Bra019014.1-P	Field mustard	extracellular	20.12	24.56
CDY34817	Canola	extracellular	18.66	24.52
CDY26013	Canola	extracellular	19.53	24.36
CDY44359	Canola	extracellular	19.24	24.35
AT3G16530.1	Thale cress	extracellular	19.53	24.28
Bra019012.1-P	Field mustard	extracellular	19.24	24.09
Bra028838.1-P	Field mustard	extracellular	18.95	23.99
CDY66969	Canola	extracellular	18.95	23.9
CDY26012	Canola	extracellular	18.95	23.72
AT1G53070.1	Thale cress	extracellular	18.66	23.53
CDY34610	Canola	cytosol	3.21	23.4
Bra019013.1-P	Field mustard	extracellular	18.66	23.19
Bra031794.1-P	Field mustard	extracellular	19.53	23.1
CDY34609	Canola	extracellular	13.7	22.38
CDX75822	Canola	plastid	7.0	20.51
HORVU2Hr1G099010.1	Barley	cytosol	20.12	19.22
HORVU1Hr1G013700.1	Barley	plastid, vacuole	38.48	17.39

Protein Annotations

EnsemblPlants:GSMUA_Achr6P33000_001	EnsemblPlants:GSMUA_Achr6T33000_001	EnsemblPlantsGene:GSMUA_Achr6G33000_001	Gene3D:2.60.120.200	GO:GO:0003674	GO:GO:0005488
GO:GO:0030246	InterPro:ConA-like_dom_sf	InterPro:Legume_lectin_dom	PANTHER:PTHR27007	PANTHER:PTHR27007:SF47	PFAM:PF00139
SEG:seg	SUPFAM:SSF49899	TMHMM:TMhelix	UniParc:UPI0002952A94	UniProt:M0TC94	MapMan:35.1

Description

Putative bark agglutinin LECRPA3 (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr6G33000_001]

Coordinates

chr6:-:32186676..32188133

Molecular Weight (calculated)

38002.3 Da

IEP (calculated)

10.401

GRAVY (calculated)

-0.318

Length

343 amino acids

Sequence
(BLAST)

001: MPRQQQQQRQ RVLSFWSCRL VPLLAAVLLV SVLQVGGGEA VVFNFRTLTL GNLKLLGDAH LKNGSFRLSR DLPVPNSGAG RALYAEPVRL RHPATRVPLP
101: FSTFFSFSIV NLNPSSIGGG LAFLLAPDDT SFDTRMDVEF EDINDNHVGV NLGSLVSAQV ADLDSVGIDL KSGDLINAWI EYGGGAAGWM LQVFVSYSTV
201: RPADPVLSFP VDLGRYVDDF AFVGFSGSTQ GSTEIHSVEW WSFSSPSLGA SPPRRKPQRR NFTQKMGTLG GDVGDRQLPE RVQLQRARRC HSRLRLISYH
301: WPRRLRHRLQ RDHPGDGRDG GRQEVHPERE RQRRAAGEGG VPL

Best Arabidopsis Sequence Match ( AT5G03140.1 )
(BLAST)

001: MLKLPPRFFS VYSTLIHILA SFLCSSDVRG DFPATRFDLG TLTLSSLKLL GDAHLNNGTI KLTRELSVPT STAGKALYGK PVKFRHPETK SPASFTTYFS
101: FSVTNLNPSS IGGGLAFVIS PDEDYLGSTG GFLGLTEETG SGSGFVAVEF DTLMDVQFKD VNGNHVGLDL NAVVSAAVAD LGNVDIDLKS GNAVNSWITY
201: DGSGRVLTVY VSYSNLKPKS PILSVPLDLD RYVSDSMFVG FSGSTQGSTE IHSVDWWSFS SSFEESSESP PPMPNSPPPS SPSSSITPSL STVRRKTADP
301: SSSCRNKLCK KSPAAVAGVV TAGAFFLALF AGVIIWVYSK KIKYTRKSES LASEIMKSPR EFTYKELKLA TDCFSSSRVI GNGAFGTVYK GILQDSGEII
401: AIKRCSHISQ GNTEFLSELS LIGTLRHRNL LRLQGYCREK GEILLIYDLM PNGSLDKALY ESPTTLPWPH RRKILLGVAS ALAYLHQECE NQIIHRDVKT
501: SNIMLDANFN PKLGDFGLAR QTEHDKSPDA TAAAGTMGYL APEYLLTGRA TEKTDVFSYG AVVLEVCTGR RPITRPEPEP GLRPGLRSSL VDWVWGLYRE
601: GKLLTAVDER LSEFNPEEMS RVMMVGLACS QPDPVTRPTM RSVVQILVGE ADVPEVPIAK PSSSMSFSTS ELLLTLQDSV SDCNEVLAPI STTSCSSSEH
701: DIFIVGKDRS V

Arabidopsis Description

LECRK82L-type lectin-domain containing receptor kinase VIII.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYX1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.