Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34817 | Canola | extracellular | 81.43 | 65.52 |
| CDY24118 | Canola | extracellular | 66.67 | 49.82 |
| CDY72663 | Canola | extracellular | 60.48 | 47.57 |
| CDX97656 | Canola | extracellular | 60.0 | 45.65 |
| CDY26013 | Canola | extracellular | 56.67 | 43.27 |
| CDY44359 | Canola | extracellular | 55.24 | 42.8 |
| CDY20121 | Canola | extracellular | 56.19 | 42.75 |
| CDY24120 | Canola | extracellular | 55.71 | 42.7 |
| CDY26012 | Canola | extracellular | 55.71 | 42.7 |
| CDY66969 | Canola | extracellular | 54.76 | 42.28 |
| CDY24119 | Canola | mitochondrion, plastid | 44.76 | 42.15 |
| CDY21835 | Canola | extracellular | 55.24 | 42.03 |
| HORVU2Hr1G043510.1 | Barley | extracellular | 24.29 | 19.69 |
| HORVU3Hr1G113660.1 | Barley | extracellular, vacuole | 24.29 | 14.96 |
| HORVU7Hr1G009980.1 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 23.81 | 14.66 |
| GSMUA_Achr6P33000_001 | Banana | golgi | 22.38 | 13.7 |
| CDX75822 | Canola | plastid | 7.62 | 13.68 |
| HORVU5Hr1G036880.1 | Barley | cytosol | 6.67 | 7.69 |
| HORVU1Hr1G013700.1 | Barley | plastid, vacuole | 25.71 | 7.11 |
| HORVU2Hr1G099010.1 | Barley | cytosol | 8.1 | 4.74 |
| CDY34610 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY34609 | EnsemblPlantsGene:GSBRNA2T00057057001 | Gene3D:2.60.120.200 | GO:A0A078HAW6 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0030246 | InterPro:ConA-like_dom_sf | InterPro:Legume_lectin_dom | PANTHER:PTHR32401 | PANTHER:PTHR32401:SF5 | PFAM:PF00139 |
| ProteinID:CDY34609 | ProteinID:CDY34609.1 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF49899 | TMHMM:TMhelix |
| UniParc:UPI0004EE21F0 | UniProt:A0A078HAW6 | MapMan:35.1 | : | : | : |
Description
BnaC08g41680DBnaC08g41680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HAW6]
Coordinates
chrLK032338:+:49705..50565
Molecular Weight (calculated)
23069.2 Da
IEP (calculated)
9.409
GRAVY (calculated)
-0.250
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MQIQNLCLLA LFVAIFSYTT SAARFNFNHF DGSNLVFLGD AELGSTADGS SLSGALSMTR DTSRFSHGQC KYASEIPFKP SNSSSTTYSF KTSFTFSISP
101: RRKTNPAPGH GLAFIVVPTI NNDGAAGKGF IGLLNQTNKG NPNNYVFAVE FDVFQDKNHG DINDNHVGID INSVKSTVSE KAGYWVQTRT REGKKVWEFK
201: ELKLSRIIMV
101: RRKTNPAPGH GLAFIVVPTI NNDGAAGKGF IGLLNQTNKG NPNNYVFAVE FDVFQDKNHG DINDNHVGID INSVKSTVSE KAGYWVQTRT REGKKVWEFK
201: ELKLSRIIMV
001: MTFHGDAEYA SEPDGMSKSG AIGLSRDNVP FSHGRAIFIN PVPFKPSSTS SSVYSFKTSF YFVISPRPKN PNPGHGLAFI IVPNDRNDSA SGLGYLSLVN
101: RFSNGNPKNH LFAVEFDVFK DKSLGDINDN HIGINNNSVN STVSKKAGYW YQSKIEGKNR WLFKELKLSG NGYRAWIEYE NGKVTVTIGR SQEKPKRPLI
201: EARVDLSKVF LEKMYVGFAG SMGRGVERHE ILDWSFENSA KD
101: RFSNGNPKNH LFAVEFDVFK DKSLGDINDN HIGINNNSVN STVSKKAGYW YQSKIEGKNR WLFKELKLSG NGYRAWIEYE NGKVTVTIGR SQEKPKRPLI
201: EARVDLSKVF LEKMYVGFAG SMGRGVERHE ILDWSFENSA KD
Arabidopsis Description
Lectin-like protein At1g53060 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNN1]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.