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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY66969 Canola extracellular 95.2 94.85
AT5G03350.1 Thale cress extracellular 77.12 76.28
CDY24118 Canola extracellular 62.73 60.5
CDY72663 Canola extracellular 58.67 59.55
CDY21835 Canola extracellular 60.52 59.42
CDX97656 Canola extracellular 60.15 59.06
CDY20121 Canola extracellular 59.41 58.33
CDY24119 Canola mitochondrion, plastid 45.76 55.61
CDY34817 Canola extracellular 53.51 55.56
CDY34610 Canola cytosol 9.59 55.32
CDY34609 Canola extracellular 42.8 55.24
CDY24120 Canola extracellular 52.4 51.82
CDY26013 Canola extracellular 51.29 50.55
CDY26012 Canola extracellular 50.18 49.63
CDX75822 Canola plastid 19.19 44.44
HORVU2Hr1G043510.1 Barley extracellular 27.31 28.57
HORVU3Hr1G113660.1 Barley extracellular, vacuole 28.78 22.87
HORVU5Hr1G036880.1 Barley cytosol 14.76 21.98
HORVU7Hr1G009980.1 Barley endoplasmic reticulum, extracellular, plasma membrane 27.31 21.7
GSMUA_Achr6P33000_001 Banana golgi 24.35 19.24
HORVU2Hr1G099010.1 Barley cytosol 15.87 11.98
HORVU1Hr1G013700.1 Barley plastid, vacuole 29.52 10.54
Protein Annotations
EnsemblPlants:CDY44359EnsemblPlantsGene:GSBRNA2T00080020001Gene3D:2.60.120.200GO:A0A078I485GO:GO:0003674GO:GO:0005488
GO:GO:0030246InterPro:ConA-like_dom_sfInterPro:L-lectinInterPro:Legume_lectin_domPANTHER:PTHR32401PANTHER:PTHR32401:SF5
PFAM:PF00139PIRSF:PIRSF002690ProteinID:CDY44359ProteinID:CDY44359.1SignalP:SignalP-noTMSUPFAM:SSF49899
UniParc:UPI0004EE19E9UniProt:A0A078I485MapMan:18.4.1.19:::
Description
BnaC02g03180DBnaC02g03180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I485]
Coordinates
chrLK032587:-:86230..87045
Molecular Weight (calculated)
29430.8 Da
IEP (calculated)
6.157
GRAVY (calculated)
-0.113
Length
271 amino acids
Sequence
(BLAST)
001: MQVQKLCFLA LLLAHTASAV NLSLETSNIA FLGDAELGPA SDGVSRSGAL SMTRDANPLS HGQGLWATPV PFKPSSNTSS SLPYPFETSF VFSITPRTEP
101: APGHGLAFIV VPALDNSGAG PAGYLGILNK TNNGDAKNHV FAVEFDVYKD KQLGDMNDNH VGVDVNSLTS VVAERAGYWV HLVIGRTKMW RFKELELSNG
201: ERYKAWIEYR DSNVSVTLAP EAVTKPKKPL IVAQLDLSEV FLENMYAGFA GAMGRGVERH DIWSWNFQNS A
Best Arabidopsis Sequence Match ( AT5G03350.1 )
(BLAST)
001: MKIHKLCFLA LLLAHTTSAV NLNLNLKTSE LVFLGDAELG PASDGVSRSG ALSMTRDENP FSHGQSLWST PVPFKPSSNS SSPYPFETSF TFSISTRIKP
101: APGHGLAFVV VPSIESDGPG PAGYLGIFNK TNNGNPKNHI FAVEFDVFQD KGFGDINDNH VGININSVTS VVAEKAGYWV QTGIGKMKHW SFKEFKLSNG
201: ERYKAWIEYR NSKVTVTLAP ETVKKPKKPL IVAHLDLSKV FLQNMYPGFS GAMGRGVERH DIWSWTFQNS AKRI
Arabidopsis Description
LLPLectin-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LZF5]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.