Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY66969 | Canola | extracellular | 95.2 | 94.85 |
AT5G03350.1 | Thale cress | extracellular | 77.12 | 76.28 |
CDY24118 | Canola | extracellular | 62.73 | 60.5 |
CDY72663 | Canola | extracellular | 58.67 | 59.55 |
CDY21835 | Canola | extracellular | 60.52 | 59.42 |
CDX97656 | Canola | extracellular | 60.15 | 59.06 |
CDY20121 | Canola | extracellular | 59.41 | 58.33 |
CDY24119 | Canola | mitochondrion, plastid | 45.76 | 55.61 |
CDY34817 | Canola | extracellular | 53.51 | 55.56 |
CDY34610 | Canola | cytosol | 9.59 | 55.32 |
CDY34609 | Canola | extracellular | 42.8 | 55.24 |
CDY24120 | Canola | extracellular | 52.4 | 51.82 |
CDY26013 | Canola | extracellular | 51.29 | 50.55 |
CDY26012 | Canola | extracellular | 50.18 | 49.63 |
CDX75822 | Canola | plastid | 19.19 | 44.44 |
HORVU2Hr1G043510.1 | Barley | extracellular | 27.31 | 28.57 |
HORVU3Hr1G113660.1 | Barley | extracellular, vacuole | 28.78 | 22.87 |
HORVU5Hr1G036880.1 | Barley | cytosol | 14.76 | 21.98 |
HORVU7Hr1G009980.1 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 27.31 | 21.7 |
GSMUA_Achr6P33000_001 | Banana | golgi | 24.35 | 19.24 |
HORVU2Hr1G099010.1 | Barley | cytosol | 15.87 | 11.98 |
HORVU1Hr1G013700.1 | Barley | plastid, vacuole | 29.52 | 10.54 |
Protein Annotations
EnsemblPlants:CDY44359 | EnsemblPlantsGene:GSBRNA2T00080020001 | Gene3D:2.60.120.200 | GO:A0A078I485 | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0030246 | InterPro:ConA-like_dom_sf | InterPro:L-lectin | InterPro:Legume_lectin_dom | PANTHER:PTHR32401 | PANTHER:PTHR32401:SF5 |
PFAM:PF00139 | PIRSF:PIRSF002690 | ProteinID:CDY44359 | ProteinID:CDY44359.1 | SignalP:SignalP-noTM | SUPFAM:SSF49899 |
UniParc:UPI0004EE19E9 | UniProt:A0A078I485 | MapMan:18.4.1.19 | : | : | : |
Description
BnaC02g03180DBnaC02g03180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I485]
Coordinates
chrLK032587:-:86230..87045
Molecular Weight (calculated)
29430.8 Da
IEP (calculated)
6.157
GRAVY (calculated)
-0.113
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MQVQKLCFLA LLLAHTASAV NLSLETSNIA FLGDAELGPA SDGVSRSGAL SMTRDANPLS HGQGLWATPV PFKPSSNTSS SLPYPFETSF VFSITPRTEP
101: APGHGLAFIV VPALDNSGAG PAGYLGILNK TNNGDAKNHV FAVEFDVYKD KQLGDMNDNH VGVDVNSLTS VVAERAGYWV HLVIGRTKMW RFKELELSNG
201: ERYKAWIEYR DSNVSVTLAP EAVTKPKKPL IVAQLDLSEV FLENMYAGFA GAMGRGVERH DIWSWNFQNS A
101: APGHGLAFIV VPALDNSGAG PAGYLGILNK TNNGDAKNHV FAVEFDVYKD KQLGDMNDNH VGVDVNSLTS VVAERAGYWV HLVIGRTKMW RFKELELSNG
201: ERYKAWIEYR DSNVSVTLAP EAVTKPKKPL IVAQLDLSEV FLENMYAGFA GAMGRGVERH DIWSWNFQNS A
001: MKIHKLCFLA LLLAHTTSAV NLNLNLKTSE LVFLGDAELG PASDGVSRSG ALSMTRDENP FSHGQSLWST PVPFKPSSNS SSPYPFETSF TFSISTRIKP
101: APGHGLAFVV VPSIESDGPG PAGYLGIFNK TNNGNPKNHI FAVEFDVFQD KGFGDINDNH VGININSVTS VVAEKAGYWV QTGIGKMKHW SFKEFKLSNG
201: ERYKAWIEYR NSKVTVTLAP ETVKKPKKPL IVAHLDLSKV FLQNMYPGFS GAMGRGVERH DIWSWTFQNS AKRI
101: APGHGLAFVV VPSIESDGPG PAGYLGIFNK TNNGNPKNHI FAVEFDVFQD KGFGDINDNH VGININSVTS VVAEKAGYWV QTGIGKMKHW SFKEFKLSNG
201: ERYKAWIEYR NSKVTVTLAP ETVKKPKKPL IVAHLDLSKV FLQNMYPGFS GAMGRGVERH DIWSWTFQNS AKRI
Arabidopsis Description
LLPLectin-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LZF5]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.