CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97656	Canola	extracellular	98.5	95.29
CDY21835	Canola	extracellular	87.64	84.78
CDY20121	Canola	extracellular	87.27	84.42
AT3G15356.1	Thale cress	extracellular	82.4	81.18
AT3G16530.1	Thale cress	extracellular	83.52	80.8
CDX75822	Canola	plastid	28.46	64.96
CDY34609	Canola	extracellular	47.57	60.48
CDY66969	Canola	extracellular	61.42	60.29
CDY24118	Canola	extracellular	62.17	59.07
CDY44359	Canola	extracellular	59.55	58.67
CDY34817	Canola	extracellular	53.56	54.79
CDY24119	Canola	mitochondrion, plastid	43.45	52.02
CDY24120	Canola	extracellular	52.43	51.09
CDY26013	Canola	extracellular	51.69	50.18
CDY26012	Canola	extracellular	50.19	48.91
CDY34610	Canola	cytosol	7.12	40.43
HORVU2Hr1G043510.1	Barley	extracellular	28.09	28.96
HORVU3Hr1G113660.1	Barley	extracellular, vacuole	27.72	21.7
HORVU7Hr1G009980.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	27.34	21.41
GSMUA_Achr6P33000_001	Banana	golgi	25.47	19.83
HORVU5Hr1G036880.1	Barley	cytosol	12.36	18.13
HORVU2Hr1G099010.1	Barley	cytosol	15.36	11.42
HORVU1Hr1G013700.1	Barley	plastid, vacuole	29.96	10.54

Protein Annotations

EnsemblPlants:CDY72663	EnsemblPlantsGene:GSBRNA2T00034313001	Gene3D:2.60.120.200	GO:A0A078JYB0	GO:GO:0003674	GO:GO:0005488
GO:GO:0030246	InterPro:ConA-like_dom_sf	InterPro:L-lectin	InterPro:Legume_lectin_dom	PANTHER:PTHR32401	PANTHER:PTHR32401:SF5
PFAM:PF00139	PIRSF:PIRSF002690	ProteinID:CDY72663	ProteinID:CDY72663.1	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF49899	UniParc:UPI0004EDEC1F	UniProt:A0A078JYB0	MapMan:18.4.1.19	:	:

Description

BnaCnng78710DBnaCnng78710D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JYB0]

Coordinates

chrLK052523:-:3..803

Molecular Weight (calculated)

29726.0 Da

IEP (calculated)

8.995

GRAVY (calculated)

-0.398

Length

267 amino acids

Sequence
(BLAST)

001: MQIHKLCFLA LFLAQAAFAV KFNFKTFDGD NLFFLGDAEL GPSSDGLDRS GAWSMTRDEN PFSHGQGLYI NPIPFKPSND SAPYSFETSF TFSITPRTKP
101: NSGQGLAFIV VPTVDNSGAS GGGFLGMLNK TNNGKPENNL FAVEFDTFQN KEFQDISGNH VGLNINSMTS NVAEKAGYWV QTRVGKRKVW SFKDVNLSSG
201: ERFTAWIEFR NKDNRITITL APENMKKPKR PLIQGPRELN DVILQNSYVG FAGSMGRAAE RHDIWSW

Best Arabidopsis Sequence Match ( AT3G16530.1 )
(BLAST)

001: MQIHKLCFLV LFLANAAFAV KFNFDSFDGS NLLFLGDAEL GPSSDGVSRS GALSMTRDEN PFSHGQGLYI NQIPFKPSNT SSPFSFETSF TFSITPRTKP
101: NSGQGFAFII TPEADNSGAS DGGYLGILNK TNDGKPENHI LAIEFDTFQN KEFLDISGNH VGVNINSMTS LVAEKAGYWV QTRVGKRKVW SFKDVNLSSG
201: ERFKAWVEFR NKDSTITVTL APENVKKPKR ALIEAPRVLN EVLLQNMYAG FAGSMGRAVE RHDIWSWSFE NAAKNN

Arabidopsis Description

Lectin-like protein At3g16530 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK72]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.