Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75822 | Canola | plastid | 46.81 | 18.8 |
| CDY34817 | Canola | extracellular | 93.62 | 16.86 |
| CDY44359 | Canola | extracellular | 55.32 | 9.59 |
| CDY66969 | Canola | extracellular | 55.32 | 9.56 |
| CDY24119 | Canola | mitochondrion, plastid | 44.68 | 9.42 |
| CDY24118 | Canola | extracellular | 55.32 | 9.25 |
| CDY24120 | Canola | extracellular | 51.06 | 8.76 |
| CDY26013 | Canola | extracellular | 48.94 | 8.36 |
| CDX97656 | Canola | extracellular | 48.94 | 8.33 |
| CDY21835 | Canola | extracellular | 48.94 | 8.33 |
| CDY20121 | Canola | extracellular | 46.81 | 7.97 |
| CDY26012 | Canola | extracellular | 44.68 | 7.66 |
| CDY72663 | Canola | extracellular | 40.43 | 7.12 |
| HORVU5Hr1G036880.1 | Barley | cytosol | 25.53 | 6.59 |
| HORVU2Hr1G099010.1 | Barley | cytosol | 25.53 | 3.34 |
| HORVU3Hr1G113660.1 | Barley | extracellular, vacuole | 23.4 | 3.23 |
| GSMUA_Achr6P33000_001 | Banana | golgi | 23.4 | 3.21 |
| HORVU7Hr1G009980.1 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 21.28 | 2.93 |
| HORVU2Hr1G043510.1 | Barley | extracellular | 14.89 | 2.7 |
| HORVU1Hr1G013700.1 | Barley | plastid, vacuole | 23.4 | 1.45 |
| CDY34609 | Canola | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY34610 | EnsemblPlantsGene:GSBRNA2T00057058001 | Gene3D:2.60.120.200 | GO:A0A078H7W9 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0030246 | InterPro:ConA-like_dom_sf | InterPro:Legume_lectin_dom | PFAM:PF00139 | ProteinID:CDY34610 | ProteinID:CDY34610.1 |
| SUPFAM:SSF49899 | UniParc:UPI0004EF2EC3 | UniProt:A0A078H7W9 | MapMan:35.2 | : | : |
Description
BnaC08g41690DBnaC08g41690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H7W9]
Coordinates
chrLK032338:+:50669..50812
Molecular Weight (calculated)
5378.4 Da
IEP (calculated)
5.698
GRAVY (calculated)
-0.496
Length
47 amino acids
Sequence
(BLAST)
(BLAST)
1: MDLSKVFLGN MFTGFAGSMG REVERHDIWT WMFENNAPKE TKPVQSG
001: MKIHKLCFLA LLLAHTTSAV NLNLNLKTSE LVFLGDAELG PASDGVSRSG ALSMTRDENP FSHGQSLWST PVPFKPSSNS SSPYPFETSF TFSISTRIKP
101: APGHGLAFVV VPSIESDGPG PAGYLGIFNK TNNGNPKNHI FAVEFDVFQD KGFGDINDNH VGININSVTS VVAEKAGYWV QTGIGKMKHW SFKEFKLSNG
201: ERYKAWIEYR NSKVTVTLAP ETVKKPKKPL IVAHLDLSKV FLQNMYPGFS GAMGRGVERH DIWSWTFQNS AKRI
101: APGHGLAFVV VPSIESDGPG PAGYLGIFNK TNNGNPKNHI FAVEFDVFQD KGFGDINDNH VGININSVTS VVAEKAGYWV QTGIGKMKHW SFKEFKLSNG
201: ERYKAWIEYR NSKVTVTLAP ETVKKPKKPL IVAHLDLSKV FLQNMYPGFS GAMGRGVERH DIWSWTFQNS AKRI
Arabidopsis Description
LLPLectin-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q9LZF5]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.