CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34610	Canola	cytosol	16.86	93.62
Bra031794.1-P	Field mustard	extracellular	100.0	90.0
CDY34609	Canola	extracellular	65.52	81.43
CDY24118	Canola	extracellular	64.37	59.79
CDY72663	Canola	extracellular	54.79	53.56
CDY44359	Canola	extracellular	55.56	53.51
CDX97656	Canola	extracellular	55.94	52.9
CDY26013	Canola	extracellular	55.17	52.36
CDY66969	Canola	extracellular	54.41	52.21
CDY24120	Canola	extracellular	54.79	52.19
CDY21835	Canola	extracellular	55.17	52.17
CDY24119	Canola	mitochondrion, plastid	44.44	52.02
CDY20121	Canola	extracellular	54.79	51.81
CDY26012	Canola	extracellular	53.64	51.09
CDX75822	Canola	plastid	19.16	42.73
HORVU2Hr1G043510.1	Barley	extracellular	21.46	21.62
HORVU5Hr1G036880.1	Barley	cytosol	14.18	20.33
GSMUA_Achr6P33000_001	Banana	golgi	24.52	18.66
HORVU3Hr1G113660.1	Barley	extracellular, vacuole	23.75	18.18
HORVU7Hr1G009980.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	22.99	17.6
HORVU2Hr1G099010.1	Barley	cytosol	12.64	9.19
HORVU1Hr1G013700.1	Barley	plastid, vacuole	24.9	8.56

Protein Annotations

EnsemblPlants:CDY34817	EnsemblPlantsGene:GSBRNA2T00057371001	Gene3D:2.60.120.200	GO:A0A078HAN8	GO:GO:0003674	GO:GO:0005488
GO:GO:0030246	InterPro:ConA-like_dom_sf	InterPro:Legume_lectin_dom	PANTHER:PTHR32401	PANTHER:PTHR32401:SF5	PFAM:PF00139
ProteinID:CDY34817	ProteinID:CDY34817.1	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF49899	TMHMM:TMhelix
UniParc:UPI0004EEE206	UniProt:A0A078HAN8	MapMan:35.1	:	:	:

Description

BnaA09g47430DBnaA09g47430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HAN8]

Coordinates

chrLK032342:+:6717..7596

Molecular Weight (calculated)

28653.8 Da

IEP (calculated)

9.468

GRAVY (calculated)

-0.316

Length

261 amino acids

Sequence
(BLAST)

001: MQIQNLCLLA LFVAIFSYTT SAARFNFNHF DGSNLVFLGD AELGSTADGS SLSGALSMTR DTSRFSHGQG KYASEIPFKP SNSSSTTYSF KTSFTFSISP
101: RRKTNPAPGH GLAFIVVPTI DNDGAAGKGF LDINDNHVGI DINSVKSTVS EKAGYWVQTR TGEGKKVLEF KELKLSSGDK YKSWVEYDNV TKLVTVTIAP
201: AYLSKPKKPL IETQIDLSKV FLGNMFTGFS GSMGREVERH DIWTWRFENN APKETKPVQS G

Best Arabidopsis Sequence Match ( AT1G53070.1 )
(BLAST)

001: MKIQILCFTT LFLAIFTSQV TTAYKFKFDY FGNGTDPISF HGDAEYGPDT DGKSRSGAIA LTRDNIPFSH GRAIFTTPIT FKPNASALYP FKTSFTFSIT
101: PKTNPNQGHG LAFIVVPSNQ NDAGSGLGYL SLLNRTNNGN PNNHLFAVEF DVFQDKSLGD MNDNHVGIDI NSVDSVVSVK SGYWVMTRSG WLFKDLKLSS
201: GDRYKAWIEY NNNYKVVSVT IGLAHLKKPN RPLIEAKFDL SKVIHEVMYT GFAGSMGRGV ERHEIWDWTF QN

Arabidopsis Description

Lectin-like protein At1g53070 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNN2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.