CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027257.1-P	Field mustard	extracellular	99.64	99.64
CDY72663	Canola	extracellular	95.29	98.5
CDY21835	Canola	extracellular	88.41	88.41
CDY20121	Canola	extracellular	87.32	87.32
AT3G16530.1	Thale cress	extracellular	84.06	84.06
AT3G15356.1	Thale cress	extracellular	81.88	83.39
CDX75822	Canola	plastid	29.71	70.09
CDY66969	Canola	extracellular	60.87	61.76
CDY24118	Canola	extracellular	62.68	61.57
CDY44359	Canola	extracellular	59.06	60.15
CDY34609	Canola	extracellular	45.65	60.0
CDY34817	Canola	extracellular	52.9	55.94
CDY24119	Canola	mitochondrion, plastid	42.75	52.91
CDY24120	Canola	extracellular	52.17	52.55
CDY26013	Canola	extracellular	51.45	51.64
CDY26012	Canola	extracellular	49.64	50.0
CDY34610	Canola	cytosol	8.33	48.94
HORVU2Hr1G043510.1	Barley	extracellular	27.17	28.96
HORVU3Hr1G113660.1	Barley	extracellular, vacuole	27.54	22.29
HORVU7Hr1G009980.1	Barley	endoplasmic reticulum, extracellular, plasma membrane	27.17	21.99
GSMUA_Achr6P33000_001	Banana	golgi	25.36	20.41
HORVU5Hr1G036880.1	Barley	cytosol	12.68	19.23
HORVU2Hr1G099010.1	Barley	cytosol	15.58	11.98
HORVU1Hr1G013700.1	Barley	plastid, vacuole	29.71	10.8

Protein Annotations

EnsemblPlants:CDX97656	EnsemblPlantsGene:GSBRNA2T00104891001	Gene3D:2.60.120.200	GO:A0A078E8X9	GO:GO:0003674	GO:GO:0005488
GO:GO:0030246	InterPro:ConA-like_dom_sf	InterPro:L-lectin	InterPro:Legume_lectin_dom	PANTHER:PTHR32401	PANTHER:PTHR32401:SF5
PFAM:PF00139	PIRSF:PIRSF002690	ProteinID:CDX97656	ProteinID:CDX97656.1	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF49899	UniParc:UPI0004EEDDF9	MapMan:18.4.1.19	:	:	:

Description

BnaA05g24230D

Coordinates

chrLK031900:-:818350..819275

Molecular Weight (calculated)

30638.0 Da

IEP (calculated)

9.378

GRAVY (calculated)

-0.401

Length

276 amino acids

Sequence
(BLAST)

001: MQIHKLCFLA LFLAQAAFAV KFNFKTFNGD NLFFLGDAEL GPSSDGLDRS GAWSMTRDET PFSHGQGLYI NPIPFKPSND SAPYSFETSF TFSITPRTKP
101: NSGQGLAFIV VPTVDNSGAS GGGFLGILNK TNNGKPENNL FAVEFDTFQN KEFQDISGNH VGLNINSMTS NVAEKAGYWV QTRVGKRKVW SFKDVNLSSG
201: ERFTAWIEFR NKDNRITITL APENVKKPKR PLIQGPRELN DVILQNSYVG FAGSMGRAAE RHDIWSWSFE NAAKNN

Best Arabidopsis Sequence Match ( AT3G16530.1 )
(BLAST)

001: MQIHKLCFLV LFLANAAFAV KFNFDSFDGS NLLFLGDAEL GPSSDGVSRS GALSMTRDEN PFSHGQGLYI NQIPFKPSNT SSPFSFETSF TFSITPRTKP
101: NSGQGFAFII TPEADNSGAS DGGYLGILNK TNDGKPENHI LAIEFDTFQN KEFLDISGNH VGVNINSMTS LVAEKAGYWV QTRVGKRKVW SFKDVNLSSG
201: ERFKAWVEFR NKDSTITVTL APENVKKPKR ALIEAPRVLN EVLLQNMYAG FAGSMGRAVE RHDIWSWSFE NAAKNN

Arabidopsis Description

Lectin-like protein At3g16530 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK72]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.